EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000015593 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 6752 bases
Position: chr9:18494310-18501061
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000024417	zf-C2H2	PF00096.26	4e-21	1	3
ENSCSEP00000024417	zf-C2H2	PF00096.26	4e-21	2	3
ENSCSEP00000024417	zf-C2H2	PF00096.26	4e-21	3	3
ENSCSEP00000024417	zf-met	PF12874.7	3e-10	1	2
ENSCSEP00000024417	zf-met	PF12874.7	3e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000024747	-	333	-	ENSCSEP00000024417	110 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000015593's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000015593's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000015593	-	85	46.250	ENSCSEG00000017606	zbtb47b	63	46.250
ENSCSEG00000015593	-	74	48.571	ENSCSEG00000021022	-	56	48.571
ENSCSEG00000015593	-	81	53.731	ENSCSEG00000018535	-	79	49.367
ENSCSEG00000015593	-	98	54.430	ENSCSEG00000014637	-	86	54.430
ENSCSEG00000015593	-	77	54.878	ENSCSEG00000005974	-	82	53.571
ENSCSEG00000015593	-	76	53.750	ENSCSEG00000004210	-	98	53.750
ENSCSEG00000015593	-	85	55.556	ENSCSEG00000018815	-	78	55.556
ENSCSEG00000015593	-	84	51.852	ENSCSEG00000004721	-	60	51.852
ENSCSEG00000015593	-	75	55.556	ENSCSEG00000001771	-	59	55.556
ENSCSEG00000015593	-	86	56.790	ENSCSEG00000004348	-	79	56.790
ENSCSEG00000015593	-	75	59.649	ENSCSEG00000005983	-	85	59.649
ENSCSEG00000015593	-	77	53.750	ENSCSEG00000020730	-	79	53.086
ENSCSEG00000015593	-	79	61.404	ENSCSEG00000007055	-	89	58.491
ENSCSEG00000015593	-	78	49.351	ENSCSEG00000019047	-	69	50.000
ENSCSEG00000015593	-	73	55.224	ENSCSEG00000010453	-	59	55.224
ENSCSEG00000015593	-	75	58.750	ENSCSEG00000004273	-	71	58.750
ENSCSEG00000015593	-	75	51.250	ENSCSEG00000008903	-	73	51.250
ENSCSEG00000015593	-	91	48.101	ENSCSEG00000005935	ZNF319	62	48.101
ENSCSEG00000015593	-	92	49.180	ENSCSEG00000010264	-	53	49.180
ENSCSEG00000015593	-	90	51.220	ENSCSEG00000019979	prdm5	68	51.220
ENSCSEG00000015593	-	80	52.632	ENSCSEG00000001748	-	97	51.852
ENSCSEG00000015593	-	76	55.000	ENSCSEG00000008502	-	69	55.000
ENSCSEG00000015593	-	98	56.250	ENSCSEG00000020696	-	93	57.143
ENSCSEG00000015593	-	73	48.750	ENSCSEG00000018829	-	62	48.750
ENSCSEG00000015593	-	77	55.556	ENSCSEG00000018822	-	88	55.556
ENSCSEG00000015593	-	95	52.941	ENSCSEG00000003757	-	98	60.000
ENSCSEG00000015593	-	77	59.677	ENSCSEG00000019029	-	90	59.677
ENSCSEG00000015593	-	91	55.000	ENSCSEG00000008539	-	55	55.000
ENSCSEG00000015593	-	91	45.570	ENSCSEG00000013879	znf319b	59	45.570
ENSCSEG00000015593	-	77	50.000	ENSCSEG00000019848	-	52	50.000
ENSCSEG00000015593	-	75	44.318	ENSCSEG00000019599	-	63	44.318
ENSCSEG00000015593	-	75	56.962	ENSCSEG00000004265	-	56	56.962
ENSCSEG00000015593	-	74	51.351	ENSCSEG00000001168	-	74	51.351
ENSCSEG00000015593	-	80	45.000	ENSCSEG00000015585	-	71	45.000
ENSCSEG00000015593	-	77	50.746	ENSCSEG00000000356	znf648	89	50.746
ENSCSEG00000015593	-	82	56.250	ENSCSEG00000013398	-	86	56.250
ENSCSEG00000015593	-	97	53.571	ENSCSEG00000011586	znf236	68	45.882
ENSCSEG00000015593	-	73	58.750	ENSCSEG00000010423	-	57	58.750
ENSCSEG00000015593	-	74	58.750	ENSCSEG00000008510	-	52	58.750
ENSCSEG00000015593	-	75	50.000	ENSCSEG00000010614	-	76	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000015593	-	85	53.571	ENSAPOG00000019138	-	56	53.571	Acanthochromis_polyacanthus
ENSCSEG00000015593	-	74	48.571	ENSACIG00000004641	-	52	48.571	Amphilophus_citrinellus
ENSCSEG00000015593	-	77	51.190	ENSACIG00000017892	-	76	51.190	Amphilophus_citrinellus
ENSCSEG00000015593	-	77	52.326	ENSACIG00000007464	-	54	52.326	Amphilophus_citrinellus
ENSCSEG00000015593	-	97	35.897	ENSAOCG00000001325	-	75	37.288	Amphiprion_ocellaris
ENSCSEG00000015593	-	72	43.902	ENSAOCG00000006744	-	60	43.902	Amphiprion_ocellaris
ENSCSEG00000015593	-	84	55.000	ENSAOCG00000016897	-	60	55.000	Amphiprion_ocellaris
ENSCSEG00000015593	-	85	55.000	ENSAPEG00000001556	-	64	55.000	Amphiprion_percula
ENSCSEG00000015593	-	79	51.250	ENSAPEG00000010013	-	57	51.250	Amphiprion_percula
ENSCSEG00000015593	-	85	53.704	ENSATEG00000018931	-	80	52.273	Anabas_testudineus
ENSCSEG00000015593	-	76	52.941	ENSACLG00000011658	-	69	52.941	Astatotilapia_calliptera
ENSCSEG00000015593	-	75	50.000	ENSACLG00000019154	-	75	50.000	Astatotilapia_calliptera
ENSCSEG00000015593	-	73	60.465	ENSAMXG00000029518	-	51	60.465	Astyanax_mexicanus
ENSCSEG00000015593	-	77	53.659	ENSCING00000002128	zf(c2h2)-35	66	53.659	Ciona_intestinalis
ENSCSEG00000015593	-	74	46.053	ENSCVAG00000020141	-	62	46.053	Cyprinodon_variegatus
ENSCSEG00000015593	-	80	51.786	ENSCVAG00000003250	-	63	51.786	Cyprinodon_variegatus
ENSCSEG00000015593	-	76	51.667	ENSCVAG00000012682	-	67	51.667	Cyprinodon_variegatus
ENSCSEG00000015593	-	74	54.321	ENSCVAG00000006653	-	59	54.321	Cyprinodon_variegatus
ENSCSEG00000015593	-	85	52.500	ENSCVAG00000015616	-	73	52.500	Cyprinodon_variegatus
ENSCSEG00000015593	-	95	48.611	ENSEBUG00000014432	-	74	48.611	Eptatretus_burgeri
ENSCSEG00000015593	-	93	50.617	ENSEBUG00000007931	-	70	50.617	Eptatretus_burgeri
ENSCSEG00000015593	-	75	48.750	ENSELUG00000024007	-	56	48.750	Esox_lucius
ENSCSEG00000015593	-	93	47.500	ENSELUG00000001909	-	64	42.045	Esox_lucius
ENSCSEG00000015593	-	76	60.714	ENSGAFG00000001879	-	56	54.545	Gambusia_affinis
ENSCSEG00000015593	-	78	53.012	ENSGAFG00000008204	-	64	53.012	Gambusia_affinis
ENSCSEG00000015593	-	77	48.750	ENSHBUG00000006656	-	58	48.750	Haplochromis_burtoni
ENSCSEG00000015593	-	91	47.619	ENSHCOG00000020670	-	73	47.619	Hippocampus_comes
ENSCSEG00000015593	-	97	60.000	ENSHCOG00000015497	-	73	60.000	Hippocampus_comes
ENSCSEG00000015593	-	78	54.321	ENSHCOG00000008550	-	54	54.321	Hippocampus_comes
ENSCSEG00000015593	-	78	54.321	ENSHCOG00000001873	-	54	54.321	Hippocampus_comes
ENSCSEG00000015593	-	77	56.962	ENSHCOG00000013489	-	90	56.962	Hippocampus_comes
ENSCSEG00000015593	-	81	45.000	ENSKMAG00000007699	-	61	45.000	Kryptolebias_marmoratus
ENSCSEG00000015593	-	98	49.091	ENSLBEG00000001132	-	66	49.091	Labrus_bergylta
ENSCSEG00000015593	-	89	48.750	ENSLBEG00000006161	-	72	48.750	Labrus_bergylta
ENSCSEG00000015593	-	75	49.383	ENSLBEG00000011210	-	50	49.383	Labrus_bergylta
ENSCSEG00000015593	-	74	50.000	ENSLBEG00000017424	-	88	50.000	Labrus_bergylta
ENSCSEG00000015593	-	73	51.250	ENSLBEG00000007106	-	62	51.250	Labrus_bergylta
ENSCSEG00000015593	-	96	51.250	ENSLOCG00000004208	-	95	51.250	Lepisosteus_oculatus
ENSCSEG00000015593	-	97	52.727	ENSMAMG00000017939	-	69	52.727	Mastacembelus_armatus
ENSCSEG00000015593	-	74	51.250	ENSMZEG00005013907	-	74	51.250	Maylandia_zebra
ENSCSEG00000015593	-	74	49.091	ENSMMOG00000013330	-	51	46.875	Mola_mola
ENSCSEG00000015593	-	75	50.909	ENSMALG00000004279	-	72	50.909	Monopterus_albus
ENSCSEG00000015593	-	75	51.250	ENSONIG00000005050	-	56	51.250	Oreochromis_niloticus
ENSCSEG00000015593	-	82	51.948	ENSORLG00000021885	-	65	51.948	Oryzias_latipes
ENSCSEG00000015593	-	97	52.542	ENSORLG00000002268	-	81	46.914	Oryzias_latipes
ENSCSEG00000015593	-	74	52.500	ENSORLG00020018921	-	74	52.500	Oryzias_latipes_hni
ENSCSEG00000015593	-	73	55.000	ENSORLG00015018099	-	61	55.000	Oryzias_latipes_hsok
ENSCSEG00000015593	-	73	50.000	ENSOMEG00000005578	-	64	50.000	Oryzias_melastigma
ENSCSEG00000015593	-	74	56.790	ENSPMGG00000002661	-	60	56.790	Periophthalmus_magnuspinnatus
ENSCSEG00000015593	-	74	55.357	ENSPMGG00000002659	-	62	55.357	Periophthalmus_magnuspinnatus
ENSCSEG00000015593	-	77	44.444	ENSPMGG00000019750	-	80	44.444	Periophthalmus_magnuspinnatus
ENSCSEG00000015593	-	77	52.500	ENSPMGG00000009571	-	74	52.500	Periophthalmus_magnuspinnatus
ENSCSEG00000015593	-	84	50.000	ENSPMGG00000002455	-	87	47.887	Periophthalmus_magnuspinnatus
ENSCSEG00000015593	-	74	41.250	ENSPMAG00000004189	-	94	41.250	Petromyzon_marinus
ENSCSEG00000015593	-	87	42.169	ENSPMAG00000002022	-	98	42.169	Petromyzon_marinus
ENSCSEG00000015593	-	73	48.750	ENSPMAG00000000839	-	93	48.750	Petromyzon_marinus
ENSCSEG00000015593	-	77	50.617	ENSPFOG00000009491	-	53	50.617	Poecilia_formosa
ENSCSEG00000015593	-	80	50.617	ENSPFOG00000018860	-	99	50.617	Poecilia_formosa
ENSCSEG00000015593	-	79	49.412	ENSPLAG00000010067	-	68	49.412	Poecilia_latipinna
ENSCSEG00000015593	-	74	50.617	ENSPLAG00000008941	-	77	50.617	Poecilia_latipinna
ENSCSEG00000015593	-	72	45.570	ENSPLAG00000014832	-	71	45.570	Poecilia_latipinna
ENSCSEG00000015593	-	77	50.617	ENSPMEG00000024117	-	53	50.617	Poecilia_mexicana
ENSCSEG00000015593	-	72	45.570	ENSPMEG00000005210	-	71	45.570	Poecilia_mexicana
ENSCSEG00000015593	-	75	52.542	ENSPMEG00000002953	-	56	52.542	Poecilia_mexicana
ENSCSEG00000015593	-	75	45.679	ENSPREG00000002603	-	55	45.679	Poecilia_reticulata
ENSCSEG00000015593	-	77	46.250	ENSPREG00000009488	-	96	46.250	Poecilia_reticulata
ENSCSEG00000015593	-	79	45.333	ENSPNAG00000005946	-	75	44.444	Pygocentrus_nattereri
ENSCSEG00000015593	-	75	49.091	ENSSFOG00015011531	-	68	43.750	Scleropages_formosus
ENSCSEG00000015593	-	82	52.326	ENSSMAG00000013291	-	93	52.326	Scophthalmus_maximus
ENSCSEG00000015593	-	75	45.333	ENSSLDG00000014436	-	68	45.333	Seriola_lalandi_dorsalis
ENSCSEG00000015593	-	76	50.000	ENSSPAG00000011533	-	77	50.000	Stegastes_partitus
ENSCSEG00000015593	-	73	51.250	ENSSPAG00000011544	-	51	51.250	Stegastes_partitus
ENSCSEG00000015593	-	88	53.571	ENSXETG00000012506	znf91	89	53.571	Xenopus_tropicalis
ENSCSEG00000015593	-	81	49.383	ENSXCOG00000020768	-	69	49.383	Xiphophorus_couchianus
ENSCSEG00000015593	-	74	53.086	ENSXCOG00000003441	-	56	50.617	Xiphophorus_couchianus
ENSCSEG00000015593	-	93	45.570	ENSXCOG00000000254	-	60	45.570	Xiphophorus_couchianus