EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000015766 (Gene tree)
Gene ID: 103383393
Gene Symbol: slirp
Alias: sb:cb657|si:ch73-276n11.1
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 2557 bases
Position: chr1:18785123-18787679
Accession: 103383393
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000024676	RRM_1	PF00076.22	4.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000025008	-	1113	XM_008316493	ENSCSEP00000024676	97 (aa)	XP_008314715	UPI0004955345

Gene Model

Click here to download ENSCSEG00000015766's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000015766's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000015766	slirp	87	38.667	ENSCSEG00000011636	hnrnpaba	57	38.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000015766	slirp	87	48.837	ENSG00000119705	SLIRP	96	51.136	Homo_sapiens
ENSCSEG00000015766	slirp	86	61.905	ENSAPOG00000001298	slirp	84	61.905	Acanthochromis_polyacanthus
ENSCSEG00000015766	slirp	82	54.945	ENSAMEG00000003975	SLIRP	100	54.945	Ailuropoda_melanoleuca
ENSCSEG00000015766	slirp	84	62.195	ENSACIG00000023083	slirp	81	62.195	Amphilophus_citrinellus
ENSCSEG00000015766	slirp	95	62.366	ENSAOCG00000006342	slirp	93	62.366	Amphiprion_ocellaris
ENSCSEG00000015766	slirp	95	62.366	ENSAPEG00000015719	-	94	62.366	Amphiprion_percula
ENSCSEG00000015766	slirp	95	62.366	ENSAPEG00000015917	slirp	93	62.366	Amphiprion_percula
ENSCSEG00000015766	slirp	86	61.905	ENSATEG00000013525	slirp	84	61.905	Anabas_testudineus
ENSCSEG00000015766	slirp	86	54.762	ENSAMXG00000018693	slirp	84	54.762	Astyanax_mexicanus
ENSCSEG00000015766	slirp	72	57.746	ENSCJAG00000016946	SLIRP	72	58.209	Callithrix_jacchus
ENSCSEG00000015766	slirp	82	51.111	ENSCAFG00020015876	-	81	51.111	Canis_lupus_dingo
ENSCSEG00000015766	slirp	72	56.338	ENSCCAG00000030130	SLIRP	66	56.338	Cebus_capucinus
ENSCSEG00000015766	slirp	84	48.913	ENSCATG00000036327	SLIRP	95	50.000	Cercocebus_atys
ENSCSEG00000015766	slirp	89	47.126	ENSCSAG00000011736	SLIRP	99	44.444	Chlorocebus_sabaeus
ENSCSEG00000015766	slirp	85	50.602	ENSCPBG00000026327	SLIRP	84	50.602	Chrysemys_picta_bellii
ENSCSEG00000015766	slirp	71	54.286	ENSCANG00000032892	SLIRP	88	48.837	Colobus_angolensis_palliatus
ENSCSEG00000015766	slirp	84	49.398	ENSCGRG00001024068	Slirp	75	49.398	Cricetulus_griseus_chok1gshd
ENSCSEG00000015766	slirp	84	49.398	ENSCGRG00000017440	Slirp	75	49.398	Cricetulus_griseus_crigri
ENSCSEG00000015766	slirp	98	53.922	ENSCVAG00000012504	slirp	100	53.922	Cyprinodon_variegatus
ENSCSEG00000015766	slirp	81	56.250	ENSDARG00000097753	slirp	81	56.627	Danio_rerio
ENSCSEG00000015766	slirp	75	54.054	ENSDNOG00000007721	SLIRP	67	54.054	Dasypus_novemcinctus
ENSCSEG00000015766	slirp	72	57.746	ENSDORG00000012379	Slirp	64	57.746	Dipodomys_ordii
ENSCSEG00000015766	slirp	72	53.521	ENSETEG00000010345	SLIRP	85	47.826	Echinops_telfairi
ENSCSEG00000015766	slirp	84	55.435	ENSEASG00005020193	SLIRP	83	55.435	Equus_asinus_asinus
ENSCSEG00000015766	slirp	82	51.852	ENSEEUG00000007257	SLIRP	80	51.852	Erinaceus_europaeus
ENSCSEG00000015766	slirp	86	60.714	ENSELUG00000016800	slirp	83	60.714	Esox_lucius
ENSCSEG00000015766	slirp	68	62.687	ENSFCAG00000036326	SLIRP	68	62.687	Felis_catus
ENSCSEG00000015766	slirp	79	50.000	ENSFALG00000012583	SLIRP	76	49.383	Ficedula_albicollis
ENSCSEG00000015766	slirp	72	60.563	ENSFDAG00000008347	SLIRP	63	60.563	Fukomys_damarensis
ENSCSEG00000015766	slirp	74	54.795	ENSFHEG00000004709	slirp	78	54.795	Fundulus_heteroclitus
ENSCSEG00000015766	slirp	96	56.383	ENSGMOG00000016948	slirp	89	56.383	Gadus_morhua
ENSCSEG00000015766	slirp	93	47.253	ENSGALG00000031238	SLIRP	92	47.253	Gallus_gallus
ENSCSEG00000015766	slirp	97	57.895	ENSGAFG00000010998	slirp	94	57.895	Gambusia_affinis
ENSCSEG00000015766	slirp	84	57.317	ENSGACG00000020137	slirp	95	57.317	Gasterosteus_aculeatus
ENSCSEG00000015766	slirp	95	52.688	ENSGAGG00000009953	SLIRP	64	52.688	Gopherus_agassizii
ENSCSEG00000015766	slirp	74	54.795	ENSGGOG00000011059	-	95	51.136	Gorilla_gorilla
ENSCSEG00000015766	slirp	72	54.930	ENSHGLG00000018491	SLIRP	64	54.930	Heterocephalus_glaber_female
ENSCSEG00000015766	slirp	72	54.930	ENSHGLG00100014153	SLIRP	64	54.930	Heterocephalus_glaber_male
ENSCSEG00000015766	slirp	86	63.095	ENSHCOG00000006795	slirp	85	63.095	Hippocampus_comes
ENSCSEG00000015766	slirp	86	55.952	ENSIPUG00000010214	SLIRP	84	55.952	Ictalurus_punctatus
ENSCSEG00000015766	slirp	75	55.405	ENSSTOG00000034316	SLIRP	81	50.000	Ictidomys_tridecemlineatus
ENSCSEG00000015766	slirp	86	55.952	ENSKMAG00000002038	slirp	81	55.952	Kryptolebias_marmoratus
ENSCSEG00000015766	slirp	86	53.571	ENSLBEG00000007564	slirp	84	53.571	Labrus_bergylta
ENSCSEG00000015766	slirp	86	58.333	ENSLACG00000013434	SLIRP	81	58.333	Latimeria_chalumnae
ENSCSEG00000015766	slirp	72	54.930	ENSMFAG00000042960	SLIRP	92	47.674	Macaca_fascicularis
ENSCSEG00000015766	slirp	73	52.778	ENSMMUG00000029256	SLIRP	92	47.674	Macaca_mulatta
ENSCSEG00000015766	slirp	72	54.930	ENSMNEG00000028921	SLIRP	92	47.674	Macaca_nemestrina
ENSCSEG00000015766	slirp	94	46.078	ENSMLEG00000043644	SLIRP	95	46.078	Mandrillus_leucophaeus
ENSCSEG00000015766	slirp	84	60.976	ENSMZEG00005004617	slirp	83	60.976	Maylandia_zebra
ENSCSEG00000015766	slirp	72	56.338	ENSMAUG00000003857	Slirp	64	56.338	Mesocricetus_auratus
ENSCSEG00000015766	slirp	84	52.747	ENSMICG00000012080	SLIRP	85	52.747	Microcebus_murinus
ENSCSEG00000015766	slirp	72	57.746	ENSMOCG00000016019	Slirp	69	54.286	Microtus_ochrogaster
ENSCSEG00000015766	slirp	86	63.095	ENSMMOG00000018268	slirp	84	63.095	Mola_mola
ENSCSEG00000015766	slirp	71	57.143	ENSMODG00000005207	-	99	57.143	Monodelphis_domestica
ENSCSEG00000015766	slirp	85	57.831	ENSMALG00000012581	slirp	85	57.831	Monopterus_albus
ENSCSEG00000015766	slirp	84	54.348	MGP_CAROLIEiJ_G0017995	Slirp	85	54.348	Mus_caroli
ENSCSEG00000015766	slirp	91	48.485	ENSMUSG00000021040	Slirp	100	48.485	Mus_musculus
ENSCSEG00000015766	slirp	84	54.348	MGP_SPRETEiJ_G0018840	Slirp	82	54.348	Mus_spretus
ENSCSEG00000015766	slirp	82	56.790	ENSMLUG00000029544	-	71	56.790	Myotis_lucifugus
ENSCSEG00000015766	slirp	80	55.696	ENSMLUG00000024998	-	71	55.556	Myotis_lucifugus
ENSCSEG00000015766	slirp	82	51.724	ENSNGAG00000016363	Slirp	84	51.724	Nannospalax_galili
ENSCSEG00000015766	slirp	73	52.778	ENSNLEG00000027238	-	80	52.857	Nomascus_leucogenys
ENSCSEG00000015766	slirp	85	46.739	ENSNLEG00000032459	-	92	48.837	Nomascus_leucogenys
ENSCSEG00000015766	slirp	84	48.913	ENSODEG00000012580	SLIRP	99	48.352	Octodon_degus
ENSCSEG00000015766	slirp	84	60.976	ENSONIG00000011692	slirp	83	60.976	Oreochromis_niloticus
ENSCSEG00000015766	slirp	97	46.000	ENSOANG00000022366	SLIRP	90	46.000	Ornithorhynchus_anatinus
ENSCSEG00000015766	slirp	86	63.095	ENSORLG00000010761	slirp	65	63.095	Oryzias_latipes
ENSCSEG00000015766	slirp	86	64.286	ENSORLG00020022188	slirp	84	64.286	Oryzias_latipes_hni
ENSCSEG00000015766	slirp	85	61.446	ENSORLG00015020171	slirp	82	61.446	Oryzias_latipes_hsok
ENSCSEG00000015766	slirp	86	60.714	ENSOMEG00000019321	slirp	84	60.714	Oryzias_melastigma
ENSCSEG00000015766	slirp	77	54.545	ENSPPAG00000040710	-	100	48.980	Pan_paniscus
ENSCSEG00000015766	slirp	68	62.687	ENSPPRG00000014350	SLIRP	68	62.687	Panthera_pardus
ENSCSEG00000015766	slirp	68	62.687	ENSPTIG00000014196	SLIRP	68	62.687	Panthera_tigris_altaica
ENSCSEG00000015766	slirp	77	54.545	ENSPTRG00000030691	SLIRP	100	48.980	Pan_troglodytes
ENSCSEG00000015766	slirp	84	51.087	ENSPANG00000026323	SLIRP	95	51.136	Papio_anubis
ENSCSEG00000015766	slirp	64	55.556	ENSPKIG00000008831	slirp	62	55.556	Paramormyrops_kingsleyae
ENSCSEG00000015766	slirp	80	59.494	ENSPMGG00000010541	slirp	91	59.494	Periophthalmus_magnuspinnatus
ENSCSEG00000015766	slirp	72	54.930	ENSPEMG00000013234	Slirp	73	51.351	Peromyscus_maniculatus_bairdii
ENSCSEG00000015766	slirp	94	42.391	ENSPMAG00000009355	slirp	100	42.391	Petromyzon_marinus
ENSCSEG00000015766	slirp	79	52.564	ENSPCIG00000026842	-	84	52.564	Phascolarctos_cinereus
ENSCSEG00000015766	slirp	97	60.000	ENSPFOG00000006758	slirp	94	60.000	Poecilia_formosa
ENSCSEG00000015766	slirp	97	60.000	ENSPLAG00000011140	slirp	94	60.000	Poecilia_latipinna
ENSCSEG00000015766	slirp	97	60.000	ENSPMEG00000019535	slirp	94	60.000	Poecilia_mexicana
ENSCSEG00000015766	slirp	97	60.000	ENSPREG00000011673	slirp	94	60.000	Poecilia_reticulata
ENSCSEG00000015766	slirp	71	60.000	ENSPPYG00000006030	SLIRP	83	52.747	Pongo_abelii
ENSCSEG00000015766	slirp	73	59.722	ENSPCOG00000015159	SLIRP	67	59.722	Propithecus_coquereli
ENSCSEG00000015766	slirp	86	65.476	ENSPNAG00000008633	slirp	85	65.476	Pygocentrus_nattereri
ENSCSEG00000015766	slirp	69	54.412	ENSRBIG00000031396	-	84	48.810	Rhinopithecus_bieti
ENSCSEG00000015766	slirp	75	54.054	ENSRBIG00000032222	-	92	48.837	Rhinopithecus_bieti
ENSCSEG00000015766	slirp	75	50.000	ENSRBIG00000035817	-	86	47.826	Rhinopithecus_bieti
ENSCSEG00000015766	slirp	71	49.275	ENSRBIG00000032998	-	79	44.706	Rhinopithecus_bieti
ENSCSEG00000015766	slirp	71	54.286	ENSRROG00000017133	-	90	48.837	Rhinopithecus_roxellana
ENSCSEG00000015766	slirp	69	54.412	ENSRROG00000035604	-	84	48.810	Rhinopithecus_roxellana
ENSCSEG00000015766	slirp	75	54.054	ENSRROG00000036656	-	92	48.837	Rhinopithecus_roxellana
ENSCSEG00000015766	slirp	78	51.948	ENSRROG00000041312	-	92	47.312	Rhinopithecus_roxellana
ENSCSEG00000015766	slirp	87	49.412	ENSSBOG00000020014	SLIRP	82	53.750	Saimiri_boliviensis_boliviensis
ENSCSEG00000015766	slirp	86	67.857	ENSSFOG00015011165	slirp	85	67.857	Scleropages_formosus
ENSCSEG00000015766	slirp	84	48.780	ENSSMAG00000012930	slirp	80	48.780	Scophthalmus_maximus
ENSCSEG00000015766	slirp	86	64.286	ENSSDUG00000021883	slirp	55	64.286	Seriola_dumerili
ENSCSEG00000015766	slirp	86	64.286	ENSSLDG00000023136	slirp	76	64.286	Seriola_lalandi_dorsalis
ENSCSEG00000015766	slirp	84	51.163	ENSSPUG00000009346	SLIRP	88	51.163	Sphenodon_punctatus
ENSCSEG00000015766	slirp	86	54.762	ENSSPAG00000013477	slirp	84	54.762	Stegastes_partitus
ENSCSEG00000015766	slirp	82	54.444	ENSSSCG00000028167	SLIRP	81	54.444	Sus_scrofa
ENSCSEG00000015766	slirp	79	52.564	ENSTGUG00000012337	SLIRP	76	51.852	Taeniopygia_guttata
ENSCSEG00000015766	slirp	86	57.647	ENSTRUG00000020127	slirp	84	57.647	Takifugu_rubripes
ENSCSEG00000015766	slirp	84	58.696	ENSUAMG00000022445	SLIRP	83	58.696	Ursus_americanus
ENSCSEG00000015766	slirp	84	58.696	ENSUMAG00000007166	SLIRP	83	58.696	Ursus_maritimus
ENSCSEG00000015766	slirp	72	56.338	ENSVPAG00000001781	SLIRP	66	56.338	Vicugna_pacos
ENSCSEG00000015766	slirp	79	55.128	ENSVVUG00000004436	SLIRP	81	50.000	Vulpes_vulpes
ENSCSEG00000015766	slirp	82	55.556	ENSXETG00000030343	SLIRP	91	55.556	Xenopus_tropicalis
ENSCSEG00000015766	slirp	86	60.714	ENSXCOG00000009422	slirp	84	60.714	Xiphophorus_couchianus
ENSCSEG00000015766	slirp	97	58.947	ENSXMAG00000015655	slirp	94	58.947	Xiphophorus_maculatus