EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000015852 (Gene tree)
Gene ID: 103393069
Gene Symbol: e4f1
Alias: zgc:114190
Full Name: E4F transcription factor 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 4766 bases
Position: chr17:9088118-9092883
Accession: 103393069
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000024821	zf-C2H2	PF00096.26	8.8e-29	1	6
ENSCSEP00000024821	zf-C2H2	PF00096.26	8.8e-29	2	6
ENSCSEP00000024821	zf-C2H2	PF00096.26	8.8e-29	3	6
ENSCSEP00000024821	zf-C2H2	PF00096.26	8.8e-29	4	6
ENSCSEP00000024821	zf-C2H2	PF00096.26	8.8e-29	5	6
ENSCSEP00000024821	zf-C2H2	PF00096.26	8.8e-29	6	6
ENSCSEP00000024821	zf-met	PF12874.7	2.6e-06	1	1
ENSCSEP00000024821	zf-C2H2_jaz	PF12171.8	7.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000025153	-	3213	XM_008329897	ENSCSEP00000024821	834 (aa)	XP_016896303	UPI000496C8AE

Gene Model

Click here to download ENSCSEG00000015852's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000015852's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000015852	e4f1	60	36.527	ENSCSEG00000004348	-	87	36.527
ENSCSEG00000015852	e4f1	66	39.241	ENSCSEG00000012389	znf646	51	39.241
ENSCSEG00000015852	e4f1	71	40.123	ENSCSEG00000008903	-	81	40.260
ENSCSEG00000015852	e4f1	53	41.558	ENSCSEG00000010453	-	63	41.250
ENSCSEG00000015852	e4f1	58	40.260	ENSCSEG00000019182	-	57	40.260
ENSCSEG00000015852	e4f1	64	38.636	ENSCSEG00000001748	-	97	43.750
ENSCSEG00000015852	e4f1	84	54.545	ENSCSEG00000005491	-	83	54.545
ENSCSEG00000015852	e4f1	67	41.975	ENSCSEG00000004721	-	68	41.975
ENSCSEG00000015852	e4f1	50	42.857	ENSCSEG00000008502	-	69	42.857
ENSCSEG00000015852	e4f1	66	48.000	ENSCSEG00000011586	znf236	63	48.000
ENSCSEG00000015852	e4f1	77	51.613	ENSCSEG00000005983	-	94	51.613

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000015852	e4f1	98	60.437	ENSCVAG00000002788	e4f1	100	68.568	Cyprinodon_variegatus
ENSCSEG00000015852	e4f1	70	37.148	ENSEBUG00000016435	e4f1	82	36.582	Eptatretus_burgeri
ENSCSEG00000015852	e4f1	81	75.296	ENSFHEG00000022551	e4f1	97	66.667	Fundulus_heteroclitus
ENSCSEG00000015852	e4f1	70	77.477	ENSGMOG00000011409	e4f1	95	68.454	Gadus_morhua
ENSCSEG00000015852	e4f1	88	79.513	ENSGACG00000011808	e4f1	100	69.891	Gasterosteus_aculeatus
ENSCSEG00000015852	e4f1	98	58.363	ENSHCOG00000016455	e4f1	100	64.982	Hippocampus_comes
ENSCSEG00000015852	e4f1	96	57.344	ENSIPUG00000005379	e4f1	99	46.826	Ictalurus_punctatus
ENSCSEG00000015852	e4f1	68	80.894	ENSLBEG00000026373	e4f1	100	72.640	Labrus_bergylta
ENSCSEG00000015852	e4f1	94	72.904	ENSMMOG00000007612	e4f1	100	72.904	Mola_mola
ENSCSEG00000015852	e4f1	98	71.342	ENSMALG00000007314	e4f1	100	71.739	Monopterus_albus
ENSCSEG00000015852	e4f1	98	61.529	ENSORLG00000009160	e4f1	100	70.146	Oryzias_latipes
ENSCSEG00000015852	e4f1	98	68.237	ENSORLG00020017974	e4f1	100	68.743	Oryzias_latipes_hni
ENSCSEG00000015852	e4f1	98	68.281	ENSORLG00015007385	e4f1	100	70.752	Oryzias_latipes_hsok
ENSCSEG00000015852	e4f1	98	69.212	ENSOMEG00000012220	e4f1	100	70.303	Oryzias_melastigma
ENSCSEG00000015852	e4f1	97	60.362	ENSPKIG00000001942	e4f1	99	60.362	Paramormyrops_kingsleyae
ENSCSEG00000015852	e4f1	66	77.311	ENSPMGG00000020527	e4f1	90	87.671	Periophthalmus_magnuspinnatus
ENSCSEG00000015852	e4f1	89	60.131	ENSSFOG00015021291	e4f1	99	60.131	Scleropages_formosus
ENSCSEG00000015852	e4f1	98	74.578	ENSSMAG00000014720	e4f1	100	75.060	Scophthalmus_maximus
ENSCSEG00000015852	e4f1	88	75.351	ENSTRUG00000005176	e4f1	100	67.619	Takifugu_rubripes
ENSCSEG00000015852	e4f1	84	75.510	ENSTNIG00000018001	e4f1	100	55.447	Tetraodon_nigroviridis
ENSCSEG00000015852	e4f1	71	68.376	ENSXETG00000016091	e4f1	99	68.376	Xenopus_tropicalis