EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000015891 (Gene tree)
Gene ID: 103391238
Gene Symbol: hnrnph1
Alias: zgc:77712
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 9066 bases
Position: chr15:15995179-16004244
Accession: 103391238
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000024875	zf-RNPHF	PF08080.12	8.8e-09	1	1
ENSCSEP00000024875	RRM_1	PF00076.22	4.4e-31	1	3
ENSCSEP00000024875	RRM_1	PF00076.22	4.4e-31	2	3
ENSCSEP00000024875	RRM_1	PF00076.22	4.4e-31	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000025207	-	5639	XM_008327423	ENSCSEP00000024875	409 (aa)	XP_008325645	UPI0004975404

Gene Model

Click here to download ENSCSEG00000015891's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000015891's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000015891	hnrnph1	80	45.455	ENSCSEG00000019209	-	90	45.455
ENSCSEG00000015891	hnrnph1	91	59.701	ENSCSEG00000014207	hnrnph3	92	61.351
ENSCSEG00000015891	hnrnph1	85	33.898	ENSCSEG00000011686	esrp2	68	31.068

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000015891	hnrnph1	100	96.333	ENSAPOG00000016614	hnrnph1	100	96.333	Acanthochromis_polyacanthus
ENSCSEG00000015891	hnrnph1	98	96.011	ENSACIG00000008964	hnrnph1	98	96.011	Amphilophus_citrinellus
ENSCSEG00000015891	hnrnph1	100	96.822	ENSAOCG00000008372	hnrnph1	100	96.822	Amphiprion_ocellaris
ENSCSEG00000015891	hnrnph1	100	96.577	ENSAPEG00000012980	hnrnph1	100	96.577	Amphiprion_percula
ENSCSEG00000015891	hnrnph1	100	96.577	ENSATEG00000002792	hnrnph1	100	96.577	Anabas_testudineus
ENSCSEG00000015891	hnrnph1	99	70.575	ENSACAG00000016323	-	76	80.857	Anolis_carolinensis
ENSCSEG00000015891	hnrnph1	83	93.539	ENSACLG00000003313	hnrnph1	97	93.539	Astatotilapia_calliptera
ENSCSEG00000015891	hnrnph1	100	86.408	ENSAMXG00000002483	hnrnph1	99	88.918	Astyanax_mexicanus
ENSCSEG00000015891	hnrnph1	99	82.927	ENSAMXG00000030703	hnrnph1l	84	82.439	Astyanax_mexicanus
ENSCSEG00000015891	hnrnph1	100	93.888	ENSCVAG00000014097	hnrnph1	100	92.665	Cyprinodon_variegatus
ENSCSEG00000015891	hnrnph1	94	89.203	ENSDARG00000005551	hnrnph1l	99	85.854	Danio_rerio
ENSCSEG00000015891	hnrnph1	92	88.684	ENSDARG00000040881	hnrnph1	94	89.474	Danio_rerio
ENSCSEG00000015891	hnrnph1	100	85.647	ENSELUG00000006715	hnrnph1	100	83.294	Esox_lucius
ENSCSEG00000015891	hnrnph1	94	86.316	ENSELUG00000021437	-	99	88.947	Esox_lucius
ENSCSEG00000015891	hnrnph1	100	92.665	ENSFHEG00000008474	hnrnph1	100	91.443	Fundulus_heteroclitus
ENSCSEG00000015891	hnrnph1	96	87.277	ENSGMOG00000006782	hnrnph1	97	85.751	Gadus_morhua
ENSCSEG00000015891	hnrnph1	100	95.599	ENSGAFG00000006280	hnrnph1	100	95.599	Gambusia_affinis
ENSCSEG00000015891	hnrnph1	100	90.709	ENSGACG00000018352	hnrnph1	99	87.198	Gasterosteus_aculeatus
ENSCSEG00000015891	hnrnph1	83	93.539	ENSHBUG00000010547	hnrnph1	98	93.539	Haplochromis_burtoni
ENSCSEG00000015891	hnrnph1	100	85.545	ENSHCOG00000004513	hnrnph1	100	84.123	Hippocampus_comes
ENSCSEG00000015891	hnrnph1	94	84.833	ENSIPUG00000024047	hnrnph1l	90	84.697	Ictalurus_punctatus
ENSCSEG00000015891	hnrnph1	100	84.466	ENSIPUG00000018262	hnrnph1	100	85.194	Ictalurus_punctatus
ENSCSEG00000015891	hnrnph1	100	92.961	ENSKMAG00000018802	hnrnph1	100	91.505	Kryptolebias_marmoratus
ENSCSEG00000015891	hnrnph1	100	95.599	ENSLBEG00000027811	hnrnph1	100	95.599	Labrus_bergylta
ENSCSEG00000015891	hnrnph1	95	82.382	ENSLOCG00000012510	hnrnph1	91	81.638	Lepisosteus_oculatus
ENSCSEG00000015891	hnrnph1	99	55.046	ENSMMUG00000017392	-	76	57.310	Macaca_mulatta
ENSCSEG00000015891	hnrnph1	99	55.046	ENSMNEG00000030544	-	76	57.310	Macaca_nemestrina
ENSCSEG00000015891	hnrnph1	95	91.129	ENSMAMG00000011478	hnrnph1	99	91.129	Mastacembelus_armatus
ENSCSEG00000015891	hnrnph1	100	95.110	ENSMZEG00005009791	hnrnph1	100	93.888	Maylandia_zebra
ENSCSEG00000015891	hnrnph1	92	93.421	ENSMMOG00000009064	hnrnph1	98	93.158	Mola_mola
ENSCSEG00000015891	hnrnph1	74	51.343	ENSMODG00000002200	-	84	51.579	Monodelphis_domestica
ENSCSEG00000015891	hnrnph1	95	93.611	ENSMALG00000003999	hnrnph1	99	93.611	Monopterus_albus
ENSCSEG00000015891	hnrnph1	83	93.539	ENSNBRG00000015406	hnrnph1	98	93.539	Neolamprologus_brichardi
ENSCSEG00000015891	hnrnph1	100	95.355	ENSONIG00000017754	hnrnph1	100	94.132	Oreochromis_niloticus
ENSCSEG00000015891	hnrnph1	100	93.494	ENSORLG00000006932	hnrnph1	100	91.807	Oryzias_latipes
ENSCSEG00000015891	hnrnph1	100	93.253	ENSORLG00020007881	hnrnph1	100	91.566	Oryzias_latipes_hni
ENSCSEG00000015891	hnrnph1	100	93.494	ENSORLG00015005306	hnrnph1	100	91.807	Oryzias_latipes_hsok
ENSCSEG00000015891	hnrnph1	100	96.341	ENSOMEG00000009827	hnrnph1	100	96.341	Oryzias_melastigma
ENSCSEG00000015891	hnrnph1	100	87.681	ENSPKIG00000018203	hnrnph1l	93	90.026	Paramormyrops_kingsleyae
ENSCSEG00000015891	hnrnph1	92	82.090	ENSPKIG00000009532	-	100	79.446	Paramormyrops_kingsleyae
ENSCSEG00000015891	hnrnph1	100	94.621	ENSPMGG00000012151	hnrnph1	100	93.399	Periophthalmus_magnuspinnatus
ENSCSEG00000015891	hnrnph1	100	95.110	ENSPFOG00000004097	hnrnph1	100	93.888	Poecilia_formosa
ENSCSEG00000015891	hnrnph1	100	95.110	ENSPLAG00000011771	hnrnph1	100	93.888	Poecilia_latipinna
ENSCSEG00000015891	hnrnph1	100	95.844	ENSPMEG00000019446	hnrnph1	100	95.844	Poecilia_mexicana
ENSCSEG00000015891	hnrnph1	100	95.599	ENSPREG00000005780	hnrnph1	100	95.599	Poecilia_reticulata
ENSCSEG00000015891	hnrnph1	100	95.110	ENSPNYG00000000204	hnrnph1	100	93.888	Pundamilia_nyererei
ENSCSEG00000015891	hnrnph1	100	86.408	ENSPNAG00000000439	hnrnph1	100	87.136	Pygocentrus_nattereri
ENSCSEG00000015891	hnrnph1	99	85.122	ENSPNAG00000002784	hnrnph1l	93	88.654	Pygocentrus_nattereri
ENSCSEG00000015891	hnrnph1	98	88.354	ENSSFOG00015016055	-	94	89.501	Scleropages_formosus
ENSCSEG00000015891	hnrnph1	98	88.834	ENSSFOG00015022796	hnrnph1l	99	88.189	Scleropages_formosus
ENSCSEG00000015891	hnrnph1	96	90.932	ENSSMAG00000007820	hnrnph1	96	93.438	Scophthalmus_maximus
ENSCSEG00000015891	hnrnph1	100	96.822	ENSSDUG00000008785	hnrnph1	100	96.822	Seriola_dumerili
ENSCSEG00000015891	hnrnph1	100	96.822	ENSSLDG00000010685	hnrnph1	100	96.822	Seriola_lalandi_dorsalis
ENSCSEG00000015891	hnrnph1	100	96.088	ENSSPAG00000009921	hnrnph1	100	96.088	Stegastes_partitus
ENSCSEG00000015891	hnrnph1	100	94.866	ENSTRUG00000020069	hnrnph1	100	94.866	Takifugu_rubripes
ENSCSEG00000015891	hnrnph1	99	72.603	ENSXETG00000018321	hnrnph1	80	79.827	Xenopus_tropicalis
ENSCSEG00000015891	hnrnph1	98	92.072	ENSXCOG00000009133	hnrnph1	97	90.537	Xiphophorus_couchianus
ENSCSEG00000015891	hnrnph1	98	96.011	ENSXMAG00000021332	hnrnph1	99	96.011	Xiphophorus_maculatus