EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000015981 (Gene tree)
Gene ID: 103394344
Gene Symbol: pum1
Alias: fb96a03|si:ch211-285e16.1|wu:fb96a03|wu:fb96a08|zgc:63671
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 13151 bases
Position: chr18:9768602-9781752
Accession: 103394344
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000025042	PUF	PF00806.19	3.1e-70	1	8
ENSCSEP00000025042	PUF	PF00806.19	3.1e-70	2	8
ENSCSEP00000025042	PUF	PF00806.19	3.1e-70	3	8
ENSCSEP00000025042	PUF	PF00806.19	3.1e-70	4	8
ENSCSEP00000025042	PUF	PF00806.19	3.1e-70	5	8
ENSCSEP00000025042	PUF	PF00806.19	3.1e-70	6	8
ENSCSEP00000025042	PUF	PF00806.19	3.1e-70	7	8
ENSCSEP00000025042	PUF	PF00806.19	3.1e-70	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000025375	-	3186	XM_008331604	ENSCSEP00000025042	1061 (aa)	XP_008329826	-

Gene Model

Click here to download ENSCSEG00000015981's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000015981's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000015981	pum1	93	79.954	ENSCSEG00000020899	pum2	90	63.071

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000015981	pum1	100	77.850	ENSG00000134644	PUM1	100	78.067	Homo_sapiens
ENSCSEG00000015981	pum1	100	96.813	ENSAPOG00000021632	pum1	92	96.813	Acanthochromis_polyacanthus
ENSCSEG00000015981	pum1	100	77.911	ENSAMEG00000017656	PUM1	87	76.226	Ailuropoda_melanoleuca
ENSCSEG00000015981	pum1	100	96.620	ENSACIG00000021013	pum1	92	96.620	Amphilophus_citrinellus
ENSCSEG00000015981	pum1	100	96.813	ENSAOCG00000003944	pum1	92	96.813	Amphiprion_ocellaris
ENSCSEG00000015981	pum1	100	96.813	ENSAPEG00000014550	pum1	92	96.813	Amphiprion_percula
ENSCSEG00000015981	pum1	100	96.813	ENSATEG00000016004	pum1	100	100.000	Anabas_testudineus
ENSCSEG00000015981	pum1	100	78.261	ENSAPLG00000009351	PUM1	90	76.481	Anas_platyrhynchos
ENSCSEG00000015981	pum1	100	78.035	ENSACAG00000000682	PUM1	88	77.778	Anolis_carolinensis
ENSCSEG00000015981	pum1	100	77.850	ENSANAG00000027865	PUM1	90	76.252	Aotus_nancymaae
ENSCSEG00000015981	pum1	100	96.717	ENSACLG00000019354	pum1	100	96.717	Astatotilapia_calliptera
ENSCSEG00000015981	pum1	100	83.116	ENSAMXG00000020607	pum1	88	82.090	Astyanax_mexicanus
ENSCSEG00000015981	pum1	93	91.084	ENSBTAG00000018979	PUM1	89	91.566	Bos_taurus
ENSCSEG00000015981	pum1	100	77.891	ENSCJAG00000006035	PUM1	90	76.204	Callithrix_jacchus
ENSCSEG00000015981	pum1	93	91.525	ENSCAFG00020024616	PUM1	95	81.165	Canis_lupus_dingo
ENSCSEG00000015981	pum1	93	91.525	ENSCHIG00000012952	PUM1	89	92.010	Capra_hircus
ENSCSEG00000015981	pum1	100	77.706	ENSTSYG00000008868	PUM1	90	76.111	Carlito_syrichta
ENSCSEG00000015981	pum1	100	77.613	ENSCPOG00000031613	PUM1	90	75.926	Cavia_porcellus
ENSCSEG00000015981	pum1	93	91.084	ENSCATG00000017991	PUM1	81	91.566	Cercocebus_atys
ENSCSEG00000015981	pum1	93	91.283	ENSCLAG00000007662	PUM1	89	82.268	Chinchilla_lanigera
ENSCSEG00000015981	pum1	100	77.289	ENSCSAG00000001028	PUM1	90	75.619	Chlorocebus_sabaeus
ENSCSEG00000015981	pum1	92	67.235	ENSCHOG00000010245	PUM1	82	65.217	Choloepus_hoffmanni
ENSCSEG00000015981	pum1	100	78.466	ENSCPBG00000009288	PUM1	99	75.743	Chrysemys_picta_bellii
ENSCSEG00000015981	pum1	100	77.706	ENSCANG00000042606	PUM1	85	81.041	Colobus_angolensis_palliatus
ENSCSEG00000015981	pum1	100	77.365	ENSCGRG00001024949	Pum1	90	75.974	Cricetulus_griseus_chok1gshd
ENSCSEG00000015981	pum1	100	77.365	ENSCGRG00000014197	Pum1	90	75.974	Cricetulus_griseus_crigri
ENSCSEG00000015981	pum1	100	95.876	ENSCVAG00000007043	pum1	92	95.876	Cyprinodon_variegatus
ENSCSEG00000015981	pum1	100	84.902	ENSDARG00000099256	pum1	91	81.623	Danio_rerio
ENSCSEG00000015981	pum1	100	77.798	ENSDNOG00000010939	PUM1	90	76.296	Dasypus_novemcinctus
ENSCSEG00000015981	pum1	98	72.158	ENSETEG00000004355	PUM1	87	70.588	Echinops_telfairi
ENSCSEG00000015981	pum1	100	77.706	ENSEASG00005010813	PUM1	90	76.111	Equus_asinus_asinus
ENSCSEG00000015981	pum1	100	77.706	ENSECAG00000021369	PUM1	90	76.111	Equus_caballus
ENSCSEG00000015981	pum1	74	90.222	ENSEEUG00000003871	PUM1	64	90.667	Erinaceus_europaeus
ENSCSEG00000015981	pum1	100	88.454	ENSELUG00000002409	pum1	92	87.034	Esox_lucius
ENSCSEG00000015981	pum1	93	91.084	ENSFCAG00000010374	PUM1	88	78.563	Felis_catus
ENSCSEG00000015981	pum1	100	77.737	ENSFALG00000001214	PUM1	87	75.760	Ficedula_albicollis
ENSCSEG00000015981	pum1	100	77.613	ENSFDAG00000011319	PUM1	90	75.926	Fukomys_damarensis
ENSCSEG00000015981	pum1	96	89.738	ENSGALG00000042598	PUM1	88	89.738	Gallus_gallus
ENSCSEG00000015981	pum1	100	95.783	ENSGAFG00000015617	pum1	92	95.783	Gambusia_affinis
ENSCSEG00000015981	pum1	100	94.189	ENSGACG00000005717	pum1	92	94.189	Gasterosteus_aculeatus
ENSCSEG00000015981	pum1	96	89.940	ENSGAGG00000001290	PUM1	88	89.940	Gopherus_agassizii
ENSCSEG00000015981	pum1	100	77.706	ENSGGOG00000011983	PUM1	85	81.041	Gorilla_gorilla
ENSCSEG00000015981	pum1	100	96.626	ENSHBUG00000018718	pum1	92	96.626	Haplochromis_burtoni
ENSCSEG00000015981	pum1	100	77.521	ENSHGLG00000013819	Pum1	90	75.833	Heterocephalus_glaber_female
ENSCSEG00000015981	pum1	100	77.521	ENSHGLG00100008621	Pum1	90	75.833	Heterocephalus_glaber_male
ENSCSEG00000015981	pum1	100	89.202	ENSHCOG00000005149	pum1	100	88.075	Hippocampus_comes
ENSCSEG00000015981	pum1	100	82.113	ENSIPUG00000020421	pum1	91	81.279	Ictalurus_punctatus
ENSCSEG00000015981	pum1	100	77.613	ENSSTOG00000010757	PUM1	85	81.041	Ictidomys_tridecemlineatus
ENSCSEG00000015981	pum1	100	77.613	ENSJJAG00000000530	Pum1	85	81.041	Jaculus_jaculus
ENSCSEG00000015981	pum1	100	96.157	ENSKMAG00000003481	pum1	92	96.157	Kryptolebias_marmoratus
ENSCSEG00000015981	pum1	100	95.689	ENSLBEG00000002527	pum1	92	95.689	Labrus_bergylta
ENSCSEG00000015981	pum1	100	76.753	ENSLACG00000017188	PUM1	89	73.752	Latimeria_chalumnae
ENSCSEG00000015981	pum1	100	82.730	ENSLOCG00000005210	pum1	89	82.080	Lepisosteus_oculatus
ENSCSEG00000015981	pum1	100	78.446	ENSLAFG00000003178	PUM1	90	76.574	Loxodonta_africana
ENSCSEG00000015981	pum1	100	77.706	ENSMFAG00000010291	PUM1	85	81.041	Macaca_fascicularis
ENSCSEG00000015981	pum1	100	77.512	ENSMMUG00000013520	PUM1	85	81.041	Macaca_mulatta
ENSCSEG00000015981	pum1	100	77.706	ENSMNEG00000034639	PUM1	85	81.041	Macaca_nemestrina
ENSCSEG00000015981	pum1	100	77.706	ENSMLEG00000038743	PUM1	85	81.041	Mandrillus_leucophaeus
ENSCSEG00000015981	pum1	100	96.626	ENSMAMG00000011606	pum1	100	90.112	Mastacembelus_armatus
ENSCSEG00000015981	pum1	100	96.626	ENSMZEG00005005834	pum1	92	96.626	Maylandia_zebra
ENSCSEG00000015981	pum1	100	78.241	ENSMGAG00000000724	PUM1	90	76.552	Meleagris_gallopavo
ENSCSEG00000015981	pum1	100	77.572	ENSMAUG00000022090	Pum1	90	76.182	Mesocricetus_auratus
ENSCSEG00000015981	pum1	100	77.521	ENSMICG00000007713	-	90	75.926	Microcebus_murinus
ENSCSEG00000015981	pum1	92	90.580	ENSMICG00000012213	-	89	74.675	Microcebus_murinus
ENSCSEG00000015981	pum1	100	77.407	ENSMOCG00000015463	Pum1	90	76.111	Microtus_ochrogaster
ENSCSEG00000015981	pum1	87	99.274	ENSMMOG00000019817	pum1	100	69.501	Mola_mola
ENSCSEG00000015981	pum1	100	77.911	ENSMODG00000017067	PUM1	89	75.856	Monodelphis_domestica
ENSCSEG00000015981	pum1	100	77.108	MGP_CAROLIEiJ_G0026549	Pum1	90	75.788	Mus_caroli
ENSCSEG00000015981	pum1	100	77.108	ENSMUSG00000028580	Pum1	90	75.788	Mus_musculus
ENSCSEG00000015981	pum1	100	77.016	MGP_PahariEiJ_G0028881	Pum1	90	75.696	Mus_pahari
ENSCSEG00000015981	pum1	100	77.108	MGP_SPRETEiJ_G0027529	Pum1	90	75.788	Mus_spretus
ENSCSEG00000015981	pum1	100	77.983	ENSMPUG00000015454	PUM1	90	76.111	Mustela_putorius_furo
ENSCSEG00000015981	pum1	100	78.426	ENSMLUG00000006490	PUM1	90	76.160	Myotis_lucifugus
ENSCSEG00000015981	pum1	100	77.798	ENSNGAG00000002378	Pum1	90	76.204	Nannospalax_galili
ENSCSEG00000015981	pum1	75	97.000	ENSNBRG00000010689	pum1	86	97.000	Neolamprologus_brichardi
ENSCSEG00000015981	pum1	100	76.503	ENSNLEG00000001151	PUM1	85	79.430	Nomascus_leucogenys
ENSCSEG00000015981	pum1	71	77.720	ENSMEUG00000000976	-	56	80.228	Notamacropus_eugenii
ENSCSEG00000015981	pum1	80	91.589	ENSOPRG00000001776	PUM1	60	91.589	Ochotona_princeps
ENSCSEG00000015981	pum1	100	77.891	ENSODEG00000003465	PUM1	90	75.811	Octodon_degus
ENSCSEG00000015981	pum1	100	96.626	ENSONIG00000002290	pum1	92	96.626	Oreochromis_niloticus
ENSCSEG00000015981	pum1	93	62.323	ENSOANG00000004902	-	100	60.790	Ornithorhynchus_anatinus
ENSCSEG00000015981	pum1	99	77.994	ENSOCUG00000008641	PUM1	89	76.301	Oryctolagus_cuniculus
ENSCSEG00000015981	pum1	100	95.425	ENSORLG00000011482	pum1	92	95.425	Oryzias_latipes
ENSCSEG00000015981	pum1	100	95.425	ENSORLG00020019461	pum1	92	95.425	Oryzias_latipes_hni
ENSCSEG00000015981	pum1	100	95.518	ENSORLG00015011375	pum1	92	95.518	Oryzias_latipes_hsok
ENSCSEG00000015981	pum1	100	74.792	ENSOGAG00000011063	PUM1	90	73.105	Otolemur_garnettii
ENSCSEG00000015981	pum1	100	77.151	ENSOARG00000001899	PUM1	90	75.556	Ovis_aries
ENSCSEG00000015981	pum1	100	77.706	ENSPPAG00000044003	PUM1	85	81.041	Pan_paniscus
ENSCSEG00000015981	pum1	100	77.798	ENSPPRG00000001370	PUM1	85	81.165	Panthera_pardus
ENSCSEG00000015981	pum1	100	77.613	ENSPTIG00000010798	PUM1	85	80.917	Panthera_tigris_altaica
ENSCSEG00000015981	pum1	100	77.706	ENSPTRG00000000453	PUM1	85	81.041	Pan_troglodytes
ENSCSEG00000015981	pum1	100	77.706	ENSPANG00000016338	PUM1	85	81.041	Papio_anubis
ENSCSEG00000015981	pum1	95	92.978	ENSPKIG00000010578	pum1	90	76.449	Paramormyrops_kingsleyae
ENSCSEG00000015981	pum1	100	78.651	ENSPSIG00000014118	PUM1	90	76.481	Pelodiscus_sinensis
ENSCSEG00000015981	pum1	75	94.096	ENSPMGG00000005836	pum1	87	94.096	Periophthalmus_magnuspinnatus
ENSCSEG00000015981	pum1	100	77.572	ENSPEMG00000010009	Pum1	90	76.182	Peromyscus_maniculatus_bairdii
ENSCSEG00000015981	pum1	93	91.325	ENSPCIG00000014151	PUM1	89	91.084	Phascolarctos_cinereus
ENSCSEG00000015981	pum1	100	95.229	ENSPFOG00000007289	pum1	99	96.759	Poecilia_formosa
ENSCSEG00000015981	pum1	100	92.455	ENSPLAG00000007256	pum1	92	92.273	Poecilia_latipinna
ENSCSEG00000015981	pum1	100	95.220	ENSPMEG00000019543	pum1	98	95.033	Poecilia_mexicana
ENSCSEG00000015981	pum1	100	95.689	ENSPREG00000005195	pum1	92	95.689	Poecilia_reticulata
ENSCSEG00000015981	pum1	100	76.018	ENSPPYG00000001621	PUM1	90	74.366	Pongo_abelii
ENSCSEG00000015981	pum1	75	92.901	ENSPCAG00000001979	PUM1	64	92.901	Procavia_capensis
ENSCSEG00000015981	pum1	100	77.521	ENSPCOG00000004398	PUM1	90	75.926	Propithecus_coquereli
ENSCSEG00000015981	pum1	100	75.648	ENSPVAG00000005207	PUM1	87	73.957	Pteropus_vampyrus
ENSCSEG00000015981	pum1	100	96.532	ENSPNYG00000009518	pum1	92	96.532	Pundamilia_nyererei
ENSCSEG00000015981	pum1	100	83.489	ENSPNAG00000026728	pum1	91	82.369	Pygocentrus_nattereri
ENSCSEG00000015981	pum1	100	77.572	ENSRNOG00000011709	Pum1	90	76.067	Rattus_norvegicus
ENSCSEG00000015981	pum1	100	77.706	ENSRBIG00000042521	PUM1	85	81.041	Rhinopithecus_bieti
ENSCSEG00000015981	pum1	100	77.850	ENSRROG00000020156	PUM1	90	76.160	Rhinopithecus_roxellana
ENSCSEG00000015981	pum1	100	77.798	ENSSBOG00000032037	PUM1	86	80.392	Saimiri_boliviensis_boliviensis
ENSCSEG00000015981	pum1	100	77.911	ENSSHAG00000010918	PUM1	89	75.856	Sarcophilus_harrisii
ENSCSEG00000015981	pum1	100	95.595	ENSSMAG00000010918	pum1	92	95.595	Scophthalmus_maximus
ENSCSEG00000015981	pum1	100	97.188	ENSSDUG00000009021	pum1	92	97.188	Seriola_dumerili
ENSCSEG00000015981	pum1	93	97.149	ENSSLDG00000009667	pum1	91	97.149	Seriola_lalandi_dorsalis
ENSCSEG00000015981	pum1	93	84.615	ENSSARG00000003055	PUM1	78	81.731	Sorex_araneus
ENSCSEG00000015981	pum1	100	78.168	ENSSPUG00000006267	PUM1	90	76.296	Sphenodon_punctatus
ENSCSEG00000015981	pum1	100	96.907	ENSSPAG00000016636	pum1	92	96.907	Stegastes_partitus
ENSCSEG00000015981	pum1	100	89.293	ENSSSCG00000003591	PUM1	85	89.697	Sus_scrofa
ENSCSEG00000015981	pum1	100	96.064	ENSTRUG00000013121	pum1	92	96.064	Takifugu_rubripes
ENSCSEG00000015981	pum1	100	96.067	ENSTNIG00000016983	pum1	91	96.067	Tetraodon_nigroviridis
ENSCSEG00000015981	pum1	85	90.244	ENSTBEG00000013810	PUM1	78	90.244	Tupaia_belangeri
ENSCSEG00000015981	pum1	100	77.521	ENSTTRG00000007436	PUM1	87	75.926	Tursiops_truncatus
ENSCSEG00000015981	pum1	98	76.308	ENSUAMG00000018262	-	89	74.435	Ursus_americanus
ENSCSEG00000015981	pum1	92	82.099	ENSVPAG00000005902	PUM1	82	81.088	Vicugna_pacos
ENSCSEG00000015981	pum1	93	91.084	ENSVVUG00000014631	PUM1	90	76.296	Vulpes_vulpes
ENSCSEG00000015981	pum1	100	74.977	ENSXETG00000012904	pum1	89	73.098	Xenopus_tropicalis
ENSCSEG00000015981	pum1	100	95.689	ENSXMAG00000002945	pum1	92	95.689	Xiphophorus_maculatus