EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000015997 (Gene tree)
Gene ID: 103393062
Gene Symbol: RNPS1 (1 of many)
Alias: wu:fa19a11|zgc:65775
Full Name: RNA binding protein with serine rich domain 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 2704 bases
Position: chr17:9184289-9186992
Accession: 103393062
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000025044	RRM_1	PF00076.22	1.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000025376	RNPS1 (1 of many)-201	2206	XM_008329885	ENSCSEP00000025044	286 (aa)	XP_008328107	-

Gene Model

Click here to download ENSCSEG00000015997's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03013	RNA transport	KEGG
csem03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000015997's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000015997	RNPS1	81	63.203	ENSCSEG00000000402	RNPS1	76	74.249

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000015997	RNPS1	82	69.874	ENSG00000205937	RNPS1	86	69.136	Homo_sapiens
ENSCSEG00000015997	RNPS1	83	82.203	ENSAPOG00000017310	RNPS1	76	73.729	Acanthochromis_polyacanthus
ENSCSEG00000015997	RNPS1	75	69.302	ENSACIG00000014367	-	77	70.507	Amphilophus_citrinellus
ENSCSEG00000015997	RNPS1	80	86.522	ENSAOCG00000002404	RNPS1	82	86.522	Amphiprion_ocellaris
ENSCSEG00000015997	RNPS1	83	85.654	ENSAPEG00000006497	RNPS1	82	85.654	Amphiprion_percula
ENSCSEG00000015997	RNPS1	80	86.087	ENSATEG00000024267	RNPS1	82	86.087	Anabas_testudineus
ENSCSEG00000015997	RNPS1	84	53.252	ENSAPLG00000006231	RNPS1	56	79.832	Anas_platyrhynchos
ENSCSEG00000015997	RNPS1	82	69.456	ENSANAG00000028802	RNPS1	85	69.456	Aotus_nancymaae
ENSCSEG00000015997	RNPS1	81	62.500	ENSACLG00000021537	-	87	72.961	Astatotilapia_calliptera
ENSCSEG00000015997	RNPS1	80	76.087	ENSACLG00000025942	RNPS1	82	73.478	Astatotilapia_calliptera
ENSCSEG00000015997	RNPS1	80	72.961	ENSAMXG00000006330	-	82	69.099	Astyanax_mexicanus
ENSCSEG00000015997	RNPS1	84	69.959	ENSBTAG00000009969	RNPS1	86	69.835	Bos_taurus
ENSCSEG00000015997	RNPS1	82	69.874	ENSCJAG00000014969	RNPS1	91	66.055	Callithrix_jacchus
ENSCSEG00000015997	RNPS1	69	68.812	ENSCAFG00020026159	RNPS1	88	67.805	Canis_lupus_dingo
ENSCSEG00000015997	RNPS1	74	68.372	ENSTSYG00000031848	-	89	67.431	Carlito_syrichta
ENSCSEG00000015997	RNPS1	82	69.874	ENSTSYG00000001629	RNPS1	85	69.874	Carlito_syrichta
ENSCSEG00000015997	RNPS1	82	69.874	ENSCPOG00000002066	RNPS1	85	69.874	Cavia_porcellus
ENSCSEG00000015997	RNPS1	82	69.456	ENSCCAG00000034480	RNPS1	85	69.456	Cebus_capucinus
ENSCSEG00000015997	RNPS1	82	69.874	ENSCATG00000013756	RNPS1	85	69.874	Cercocebus_atys
ENSCSEG00000015997	RNPS1	91	65.283	ENSCATG00000042361	-	80	65.833	Cercocebus_atys
ENSCSEG00000015997	RNPS1	82	69.874	ENSCLAG00000015546	RNPS1	85	69.874	Chinchilla_lanigera
ENSCSEG00000015997	RNPS1	94	72.727	ENSCSAG00000005219	-	80	69.038	Chlorocebus_sabaeus
ENSCSEG00000015997	RNPS1	82	69.874	ENSCANG00000041307	RNPS1	89	66.514	Colobus_angolensis_palliatus
ENSCSEG00000015997	RNPS1	82	69.874	ENSCGRG00001020431	Rnps1	85	69.874	Cricetulus_griseus_chok1gshd
ENSCSEG00000015997	RNPS1	74	69.767	ENSCGRG00000014021	Rnps1	77	69.767	Cricetulus_griseus_crigri
ENSCSEG00000015997	RNPS1	76	82.949	ENSCVAG00000010868	RNPS1	76	73.023	Cyprinodon_variegatus
ENSCSEG00000015997	RNPS1	80	70.815	ENSDARG00000116743	rnps1	82	70.815	Danio_rerio
ENSCSEG00000015997	RNPS1	80	70.815	ENSDARG00000100188	RNPS1	82	70.815	Danio_rerio
ENSCSEG00000015997	RNPS1	82	69.456	ENSDORG00000001755	Rnps1	85	69.456	Dipodomys_ordii
ENSCSEG00000015997	RNPS1	82	69.874	ENSFCAG00000007690	RNPS1	85	69.874	Felis_catus
ENSCSEG00000015997	RNPS1	83	71.250	ENSFALG00000004868	RNPS1	85	71.250	Ficedula_albicollis
ENSCSEG00000015997	RNPS1	82	69.456	ENSFDAG00000003386	RNPS1	85	69.456	Fukomys_damarensis
ENSCSEG00000015997	RNPS1	75	85.116	ENSFHEG00000011705	RNPS1	77	85.116	Fundulus_heteroclitus
ENSCSEG00000015997	RNPS1	82	71.130	ENSGALG00000009288	RNPS1	84	71.130	Gallus_gallus
ENSCSEG00000015997	RNPS1	75	74.419	ENSGAFG00000005457	RNPS1	76	73.488	Gambusia_affinis
ENSCSEG00000015997	RNPS1	80	65.086	ENSGACG00000005641	-	82	65.948	Gasterosteus_aculeatus
ENSCSEG00000015997	RNPS1	80	73.593	ENSGACG00000011261	RNPS1	82	85.281	Gasterosteus_aculeatus
ENSCSEG00000015997	RNPS1	83	70.000	ENSGAGG00000010452	RNPS1	79	69.136	Gopherus_agassizii
ENSCSEG00000015997	RNPS1	82	69.874	ENSGGOG00000014275	RNPS1	85	69.874	Gorilla_gorilla
ENSCSEG00000015997	RNPS1	71	67.476	ENSGGOG00000026421	-	79	67.476	Gorilla_gorilla
ENSCSEG00000015997	RNPS1	81	62.500	ENSHBUG00000017337	-	82	72.961	Haplochromis_burtoni
ENSCSEG00000015997	RNPS1	80	75.652	ENSHBUG00000002494	RNPS1	82	73.043	Haplochromis_burtoni
ENSCSEG00000015997	RNPS1	82	69.874	ENSHGLG00000013957	RNPS1	85	69.874	Heterocephalus_glaber_female
ENSCSEG00000015997	RNPS1	77	67.713	ENSHGLG00000006292	-	87	69.302	Heterocephalus_glaber_female
ENSCSEG00000015997	RNPS1	74	61.644	ENSHGLG00100017879	-	71	60.550	Heterocephalus_glaber_male
ENSCSEG00000015997	RNPS1	82	69.874	ENSHGLG00100003539	RNPS1	85	69.874	Heterocephalus_glaber_male
ENSCSEG00000015997	RNPS1	83	64.315	ENSHGLG00100001721	-	79	64.876	Heterocephalus_glaber_male
ENSCSEG00000015997	RNPS1	80	61.603	ENSHCOG00000004424	RNPS1	82	77.966	Hippocampus_comes
ENSCSEG00000015997	RNPS1	82	69.874	ENSJJAG00000015576	-	85	69.874	Jaculus_jaculus
ENSCSEG00000015997	RNPS1	74	67.299	ENSLBEG00000024091	RNPS1	77	68.837	Labrus_bergylta
ENSCSEG00000015997	RNPS1	83	64.730	ENSMFAG00000044121	-	85	63.008	Macaca_fascicularis
ENSCSEG00000015997	RNPS1	82	69.874	ENSMFAG00000042142	RNPS1	85	69.874	Macaca_fascicularis
ENSCSEG00000015997	RNPS1	69	68.812	ENSMMUG00000019238	-	79	68.812	Macaca_mulatta
ENSCSEG00000015997	RNPS1	84	67.073	ENSMMUG00000041726	-	85	65.021	Macaca_mulatta
ENSCSEG00000015997	RNPS1	84	67.480	ENSMNEG00000024827	-	85	65.432	Macaca_nemestrina
ENSCSEG00000015997	RNPS1	71	66.184	ENSMLEG00000040232	-	80	65.049	Mandrillus_leucophaeus
ENSCSEG00000015997	RNPS1	82	69.874	ENSMLEG00000036928	RNPS1	85	69.874	Mandrillus_leucophaeus
ENSCSEG00000015997	RNPS1	81	75.107	ENSMAMG00000021148	-	81	74.569	Mastacembelus_armatus
ENSCSEG00000015997	RNPS1	80	87.826	ENSMAMG00000021609	-	82	87.826	Mastacembelus_armatus
ENSCSEG00000015997	RNPS1	80	76.087	ENSMZEG00005012742	RNPS1	82	73.478	Maylandia_zebra
ENSCSEG00000015997	RNPS1	80	62.338	ENSMZEG00005006256	-	83	64.655	Maylandia_zebra
ENSCSEG00000015997	RNPS1	75	70.320	ENSMGAG00000010042	RNPS1	90	70.320	Meleagris_gallopavo
ENSCSEG00000015997	RNPS1	82	69.456	ENSMICG00000031543	RNPS1	85	69.456	Microcebus_murinus
ENSCSEG00000015997	RNPS1	82	69.874	ENSMOCG00000003429	Rnps1	85	69.874	Microtus_ochrogaster
ENSCSEG00000015997	RNPS1	74	67.136	ENSMMOG00000010863	RNPS1	77	68.837	Mola_mola
ENSCSEG00000015997	RNPS1	82	69.874	ENSMUSG00000034681	Rnps1	85	69.874	Mus_musculus
ENSCSEG00000015997	RNPS1	82	69.874	MGP_PahariEiJ_G0023498	Rnps1	85	69.874	Mus_pahari
ENSCSEG00000015997	RNPS1	82	69.874	MGP_SPRETEiJ_G0022092	Rnps1	85	69.874	Mus_spretus
ENSCSEG00000015997	RNPS1	82	69.874	ENSNGAG00000023702	Rnps1	85	69.874	Nannospalax_galili
ENSCSEG00000015997	RNPS1	75	69.302	ENSNBRG00000023437	RNPS1	77	67.907	Neolamprologus_brichardi
ENSCSEG00000015997	RNPS1	80	62.338	ENSNBRG00000014540	-	84	72.845	Neolamprologus_brichardi
ENSCSEG00000015997	RNPS1	86	69.076	ENSNLEG00000009243	RNPS1	98	68.313	Nomascus_leucogenys
ENSCSEG00000015997	RNPS1	58	52.096	ENSODEG00000002513	-	53	47.934	Octodon_degus
ENSCSEG00000015997	RNPS1	80	71.304	ENSORLG00000008033	RNPS1	94	67.476	Oryzias_latipes
ENSCSEG00000015997	RNPS1	81	71.429	ENSORLG00020020207	RNPS1	82	68.398	Oryzias_latipes_hni
ENSCSEG00000015997	RNPS1	81	71.861	ENSORLG00015000305	-	82	68.831	Oryzias_latipes_hsok
ENSCSEG00000015997	RNPS1	85	66.667	ENSPPAG00000011845	RNPS1	86	65.690	Pan_paniscus
ENSCSEG00000015997	RNPS1	82	69.874	ENSPPRG00000011255	RNPS1	85	69.874	Panthera_pardus
ENSCSEG00000015997	RNPS1	57	65.644	ENSPTIG00000015643	RNPS1	63	79.832	Panthera_tigris_altaica
ENSCSEG00000015997	RNPS1	71	68.447	ENSPTRG00000046326	-	80	68.447	Pan_troglodytes
ENSCSEG00000015997	RNPS1	82	69.874	ENSPTRG00000031310	RNPS1	85	69.874	Pan_troglodytes
ENSCSEG00000015997	RNPS1	82	69.874	ENSPANG00000015748	RNPS1	85	69.874	Papio_anubis
ENSCSEG00000015997	RNPS1	80	73.932	ENSPKIG00000023465	RNPS1	82	72.222	Paramormyrops_kingsleyae
ENSCSEG00000015997	RNPS1	83	70.000	ENSPSIG00000006048	RNPS1	79	69.136	Pelodiscus_sinensis
ENSCSEG00000015997	RNPS1	82	69.874	ENSPEMG00000012797	Rnps1	85	69.874	Peromyscus_maniculatus_bairdii
ENSCSEG00000015997	RNPS1	82	69.456	ENSPCIG00000025012	RNPS1	85	69.456	Phascolarctos_cinereus
ENSCSEG00000015997	RNPS1	57	65.644	ENSPCIG00000016114	-	61	76.190	Phascolarctos_cinereus
ENSCSEG00000015997	RNPS1	75	75.349	ENSPFOG00000009978	RNPS1	76	74.419	Poecilia_formosa
ENSCSEG00000015997	RNPS1	75	75.349	ENSPLAG00000009343	RNPS1	76	74.419	Poecilia_latipinna
ENSCSEG00000015997	RNPS1	77	75.000	ENSPMEG00000008552	RNPS1	76	74.771	Poecilia_mexicana
ENSCSEG00000015997	RNPS1	75	75.349	ENSPREG00000001843	RNPS1	76	74.419	Poecilia_reticulata
ENSCSEG00000015997	RNPS1	82	69.456	ENSPCOG00000005478	RNPS1	85	69.456	Propithecus_coquereli
ENSCSEG00000015997	RNPS1	80	76.087	ENSPNYG00000000585	RNPS1	82	73.478	Pundamilia_nyererei
ENSCSEG00000015997	RNPS1	80	65.665	ENSPNAG00000025479	RNPS1	82	68.670	Pygocentrus_nattereri
ENSCSEG00000015997	RNPS1	82	69.874	ENSRBIG00000038965	-	88	70.000	Rhinopithecus_bieti
ENSCSEG00000015997	RNPS1	82	69.874	ENSRROG00000041252	RNPS1	89	66.514	Rhinopithecus_roxellana
ENSCSEG00000015997	RNPS1	82	69.874	ENSSBOG00000027927	RNPS1	85	69.874	Saimiri_boliviensis_boliviensis
ENSCSEG00000015997	RNPS1	81	68.376	ENSSFOG00015019341	-	74	65.966	Scleropages_formosus
ENSCSEG00000015997	RNPS1	80	73.077	ENSSFOG00015022746	RNPS1	85	70.940	Scleropages_formosus
ENSCSEG00000015997	RNPS1	80	78.261	ENSSMAG00000016933	RNPS1	82	74.783	Scophthalmus_maximus
ENSCSEG00000015997	RNPS1	80	90.435	ENSSDUG00000011453	RNPS1	82	90.435	Seriola_dumerili
ENSCSEG00000015997	RNPS1	78	88.393	ENSSLDG00000021341	RNPS1	77	85.854	Seriola_lalandi_dorsalis
ENSCSEG00000015997	RNPS1	83	70.000	ENSSPUG00000016588	RNPS1	79	69.136	Sphenodon_punctatus
ENSCSEG00000015997	RNPS1	80	85.652	ENSSPAG00000009383	RNPS1	82	85.652	Stegastes_partitus
ENSCSEG00000015997	RNPS1	83	70.417	ENSTGUG00000003237	RNPS1	85	70.417	Taeniopygia_guttata
ENSCSEG00000015997	RNPS1	80	72.414	ENSTRUG00000008602	RNPS1	82	74.138	Takifugu_rubripes
ENSCSEG00000015997	RNPS1	81	73.504	ENSTNIG00000009753	RNPS1	82	75.214	Tetraodon_nigroviridis
ENSCSEG00000015997	RNPS1	80	75.652	ENSXMAG00000004827	RNPS1	82	74.783	Xiphophorus_maculatus