EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000016135 (Gene tree)
Gene ID: 103397573
Gene Symbol: rabl6b
Alias: si:ch211-102c2.5
Full Name: rab-like protein 6
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 13620 bases
Position: chrZ:4878338-4891957
Accession: 103397573
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000025362	MMR_HSR1	PF01926.23	1.1e-05	1	1
ENSCSEP00000025305	MMR_HSR1	PF01926.23	5.8e-05	1	1
ENSCSEP00000025328	MMR_HSR1	PF01926.23	6.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000025630	-	5476	-	ENSCSEP00000025293	731 (aa)	-	-
ENSCSET00000025642	-	4898	-	ENSCSEP00000025305	707 (aa)	-	-
ENSCSET00000025653	-	5297	XM_017043259	ENSCSEP00000025317	760 (aa)	XP_016898748	UPI000D624A2B
ENSCSET00000025699	-	2148	-	ENSCSEP00000025362	715 (aa)	-	-
ENSCSET00000025673	-	4734	-	ENSCSEP00000025336	741 (aa)	-	-
ENSCSET00000025665	-	5267	XM_017043260	ENSCSEP00000025328	750 (aa)	XP_024908904	UPI000D6305AB

Gene Model

Click here to download ENSCSEG00000016135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000016135's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000016135	rabl6b	100	81.284	ENSCSEG00000012430	-	94	89.055

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000016135	rabl6b	100	73.549	ENSACIG00000010721	rabl6b	100	75.370	Amphilophus_citrinellus
ENSCSEG00000016135	rabl6b	100	80.000	ENSATEG00000012055	rabl6b	100	79.737	Anabas_testudineus
ENSCSEG00000016135	rabl6b	100	62.500	ENSELUG00000004448	rabl6b	100	61.568	Esox_lucius
ENSCSEG00000016135	rabl6b	100	71.410	ENSGAFG00000013561	rabl6b	99	74.066	Gambusia_affinis
ENSCSEG00000016135	rabl6b	100	74.770	ENSGACG00000005242	rabl6b	100	74.113	Gasterosteus_aculeatus
ENSCSEG00000016135	rabl6b	100	77.588	ENSHBUG00000014235	rabl6b	100	78.244	Haplochromis_burtoni
ENSCSEG00000016135	rabl6b	100	59.669	ENSIPUG00000019266	rabl6	100	62.276	Ictalurus_punctatus
ENSCSEG00000016135	rabl6b	100	71.279	ENSMAMG00000019516	rabl6b	100	70.806	Mastacembelus_armatus
ENSCSEG00000016135	rabl6b	67	70.309	ENSMZEG00005003942	rabl6b	99	71.753	Maylandia_zebra
ENSCSEG00000016135	rabl6b	67	68.454	ENSMMOG00000009459	rabl6b	97	65.979	Mola_mola
ENSCSEG00000016135	rabl6b	100	76.640	ENSMALG00000002029	rabl6b	100	76.903	Monopterus_albus
ENSCSEG00000016135	rabl6b	67	70.515	ENSNBRG00000012512	rabl6b	99	71.546	Neolamprologus_brichardi
ENSCSEG00000016135	rabl6b	100	75.758	ENSONIG00000010408	rabl6b	100	76.943	Oreochromis_niloticus
ENSCSEG00000016135	rabl6b	100	73.533	ENSORLG00020017557	rabl6b	100	73.862	Oryzias_latipes_hni
ENSCSEG00000016135	rabl6b	89	74.561	ENSORLG00015007848	rabl6b	91	75.332	Oryzias_latipes_hsok
ENSCSEG00000016135	rabl6b	89	74.184	ENSOMEG00000022840	rabl6b	95	75.150	Oryzias_melastigma
ENSCSEG00000016135	rabl6b	100	59.144	ENSPKIG00000007459	RABL6	100	58.182	Paramormyrops_kingsleyae
ENSCSEG00000016135	rabl6b	90	54.360	ENSPCIG00000023722	RABL6	90	57.843	Phascolarctos_cinereus
ENSCSEG00000016135	rabl6b	100	79.058	ENSPFOG00000003250	rabl6b	100	78.927	Poecilia_formosa
ENSCSEG00000016135	rabl6b	100	78.927	ENSPLAG00000019562	rabl6b	100	78.796	Poecilia_latipinna
ENSCSEG00000016135	rabl6b	100	79.058	ENSPMEG00000020472	rabl6b	100	78.927	Poecilia_mexicana
ENSCSEG00000016135	rabl6b	90	78.198	ENSPREG00000014116	rabl6b	92	79.341	Poecilia_reticulata
ENSCSEG00000016135	rabl6b	96	52.412	ENSPNAG00000010857	rabl6b	100	56.053	Pygocentrus_nattereri
ENSCSEG00000016135	rabl6b	99	60.881	ENSSFOG00015013414	-	99	61.140	Scleropages_formosus
ENSCSEG00000016135	rabl6b	100	59.162	ENSSFOG00015017388	RABL6	100	59.170	Scleropages_formosus
ENSCSEG00000016135	rabl6b	87	81.231	ENSSMAG00000012543	rabl6b	95	80.626	Scophthalmus_maximus
ENSCSEG00000016135	rabl6b	100	80.052	ENSSDUG00000006564	rabl6b	100	79.921	Seriola_dumerili
ENSCSEG00000016135	rabl6b	100	75.705	ENSSPAG00000021033	rabl6b	100	75.538	Stegastes_partitus
ENSCSEG00000016135	rabl6b	99	69.160	ENSTNIG00000010595	rabl6b	100	69.423	Tetraodon_nigroviridis