EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000016372 (Gene tree)
Gene ID: 103383818
Gene Symbol: wdr43
Alias: kiaa0007l|un-named hi821a|unm hi821a|wdr43l|wu:fb83h12|wu:fc13e01|zgc:110501
Full Name: WD repeat domain 43
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 18456 bases
Position: chr1:19503094-19521549
Accession: 103383818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000025650	Utp12	PF04003.12	1.1e-20	1	1
ENSCSEP00000025642	Utp12	PF04003.12	1.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000025987	-	2886	-	ENSCSEP00000025650	592 (aa)	-	-
ENSCSET00000025979	-	3573	XM_008317125	ENSCSEP00000025642	650 (aa)	XP_008315347	UPI000495B51C

Gene Model

Click here to download ENSCSEG00000016372's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000016372's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000016372	wdr43	98	53.719	ENSG00000163811	WDR43	100	54.545	Homo_sapiens
ENSCSEG00000016372	wdr43	98	84.786	ENSAPOG00000020303	wdr43	99	84.679	Acanthochromis_polyacanthus
ENSCSEG00000016372	wdr43	98	53.099	ENSAMEG00000005150	WDR43	94	51.729	Ailuropoda_melanoleuca
ENSCSEG00000016372	wdr43	99	81.407	ENSACIG00000010675	wdr43	99	80.341	Amphilophus_citrinellus
ENSCSEG00000016372	wdr43	98	84.274	ENSAOCG00000006818	wdr43	96	84.020	Amphiprion_ocellaris
ENSCSEG00000016372	wdr43	98	84.274	ENSAPEG00000000552	wdr43	99	82.099	Amphiprion_percula
ENSCSEG00000016372	wdr43	98	83.761	ENSATEG00000010805	wdr43	99	82.663	Anabas_testudineus
ENSCSEG00000016372	wdr43	87	56.262	ENSAPLG00000014314	WDR43	95	55.654	Anas_platyrhynchos
ENSCSEG00000016372	wdr43	96	55.987	ENSACAG00000009264	WDR43	89	55.821	Anolis_carolinensis
ENSCSEG00000016372	wdr43	98	54.050	ENSANAG00000035736	WDR43	92	54.101	Aotus_nancymaae
ENSCSEG00000016372	wdr43	99	83.137	ENSACLG00000025675	wdr43	99	81.889	Astatotilapia_calliptera
ENSCSEG00000016372	wdr43	99	68.099	ENSAMXG00000018623	wdr43	99	65.522	Astyanax_mexicanus
ENSCSEG00000016372	wdr43	98	53.554	ENSBTAG00000018196	WDR43	92	53.628	Bos_taurus
ENSCSEG00000016372	wdr43	98	54.050	ENSCJAG00000008946	WDR43	92	54.101	Callithrix_jacchus
ENSCSEG00000016372	wdr43	98	52.562	ENSCAFG00000005253	WDR43	93	52.508	Canis_familiaris
ENSCSEG00000016372	wdr43	96	52.971	ENSCAFG00020024035	WDR43	84	52.342	Canis_lupus_dingo
ENSCSEG00000016372	wdr43	98	54.201	ENSCHIG00000006001	WDR43	92	54.101	Capra_hircus
ENSCSEG00000016372	wdr43	87	54.340	ENSTSYG00000006448	WDR43	92	54.352	Carlito_syrichta
ENSCSEG00000016372	wdr43	89	43.537	ENSCAPG00000014276	WDR43	91	44.322	Cavia_aperea
ENSCSEG00000016372	wdr43	98	53.884	ENSCCAG00000028533	WDR43	93	53.678	Cebus_capucinus
ENSCSEG00000016372	wdr43	98	53.719	ENSCATG00000031005	WDR43	92	53.628	Cercocebus_atys
ENSCSEG00000016372	wdr43	98	53.960	ENSCLAG00000011898	WDR43	92	54.016	Chinchilla_lanigera
ENSCSEG00000016372	wdr43	69	53.538	ENSCSAG00000010665	WDR43	89	53.422	Chlorocebus_sabaeus
ENSCSEG00000016372	wdr43	96	53.480	ENSCHOG00000013830	WDR43	89	52.464	Choloepus_hoffmanni
ENSCSEG00000016372	wdr43	97	56.260	ENSCPBG00000000374	WDR43	92	56.369	Chrysemys_picta_bellii
ENSCSEG00000016372	wdr43	98	51.240	ENSCANG00000033059	WDR43	94	50.623	Colobus_angolensis_palliatus
ENSCSEG00000016372	wdr43	98	53.388	ENSCGRG00001023204	Wdr43	92	53.386	Cricetulus_griseus_chok1gshd
ENSCSEG00000016372	wdr43	87	53.484	ENSCGRG00000005070	Wdr43	90	53.571	Cricetulus_griseus_crigri
ENSCSEG00000016372	wdr43	95	64.499	ENSCVAG00000016604	wdr43	98	59.105	Cyprinodon_variegatus
ENSCSEG00000016372	wdr43	98	70.256	ENSDARG00000077264	wdr43	99	68.364	Danio_rerio
ENSCSEG00000016372	wdr43	98	53.058	ENSDNOG00000018841	WDR43	92	53.155	Dasypus_novemcinctus
ENSCSEG00000016372	wdr43	98	51.320	ENSDORG00000000255	Wdr43	92	51.024	Dipodomys_ordii
ENSCSEG00000016372	wdr43	72	60.839	ENSETEG00000004853	WDR43	63	60.839	Echinops_telfairi
ENSCSEG00000016372	wdr43	97	42.301	ENSEBUG00000016586	wdr43	91	41.308	Eptatretus_burgeri
ENSCSEG00000016372	wdr43	98	53.554	ENSEASG00005009046	WDR43	96	52.174	Equus_asinus_asinus
ENSCSEG00000016372	wdr43	98	49.420	ENSECAG00000023777	WDR43	96	48.571	Equus_caballus
ENSCSEG00000016372	wdr43	83	53.521	ENSEEUG00000006044	WDR43	75	53.521	Erinaceus_europaeus
ENSCSEG00000016372	wdr43	100	74.543	ENSELUG00000019806	wdr43	94	74.652	Esox_lucius
ENSCSEG00000016372	wdr43	98	53.266	ENSFCAG00000018872	WDR43	96	50.781	Felis_catus
ENSCSEG00000016372	wdr43	88	55.597	ENSFALG00000011213	WDR43	95	55.142	Ficedula_albicollis
ENSCSEG00000016372	wdr43	98	53.058	ENSFDAG00000007446	WDR43	96	51.885	Fukomys_damarensis
ENSCSEG00000016372	wdr43	99	80.976	ENSFHEG00000021863	wdr43	99	79.321	Fundulus_heteroclitus
ENSCSEG00000016372	wdr43	98	78.351	ENSGMOG00000001695	wdr43	99	76.258	Gadus_morhua
ENSCSEG00000016372	wdr43	96	55.236	ENSGALG00000032529	WDR43	93	55.360	Gallus_gallus
ENSCSEG00000016372	wdr43	98	80.171	ENSGAFG00000019525	wdr43	99	77.743	Gambusia_affinis
ENSCSEG00000016372	wdr43	97	81.239	ENSGACG00000012843	wdr43	99	78.840	Gasterosteus_aculeatus
ENSCSEG00000016372	wdr43	98	53.554	ENSGGOG00000015956	WDR43	92	53.470	Gorilla_gorilla
ENSCSEG00000016372	wdr43	99	83.305	ENSHBUG00000011585	wdr43	95	82.043	Haplochromis_burtoni
ENSCSEG00000016372	wdr43	98	52.893	ENSHGLG00000006912	WDR43	92	52.997	Heterocephalus_glaber_female
ENSCSEG00000016372	wdr43	98	52.893	ENSHGLG00100007455	WDR43	92	52.997	Heterocephalus_glaber_male
ENSCSEG00000016372	wdr43	100	78.843	ENSHCOG00000001160	wdr43	99	78.704	Hippocampus_comes
ENSCSEG00000016372	wdr43	98	69.732	ENSIPUG00000015564	wdr43	99	67.572	Ictalurus_punctatus
ENSCSEG00000016372	wdr43	98	53.311	ENSSTOG00000014687	WDR43	96	51.506	Ictidomys_tridecemlineatus
ENSCSEG00000016372	wdr43	96	51.706	ENSJJAG00000016353	-	91	52.280	Jaculus_jaculus
ENSCSEG00000016372	wdr43	88	52.142	ENSJJAG00000012314	-	89	52.389	Jaculus_jaculus
ENSCSEG00000016372	wdr43	98	81.538	ENSKMAG00000009301	wdr43	99	79.907	Kryptolebias_marmoratus
ENSCSEG00000016372	wdr43	100	81.860	ENSLBEG00000022773	wdr43	99	81.327	Labrus_bergylta
ENSCSEG00000016372	wdr43	98	55.721	ENSLACG00000012425	WDR43	89	55.446	Latimeria_chalumnae
ENSCSEG00000016372	wdr43	98	53.300	ENSLAFG00000005457	WDR43	100	53.090	Loxodonta_africana
ENSCSEG00000016372	wdr43	98	53.554	ENSMFAG00000031243	WDR43	92	53.470	Macaca_fascicularis
ENSCSEG00000016372	wdr43	98	53.554	ENSMMUG00000022268	WDR43	92	53.470	Macaca_mulatta
ENSCSEG00000016372	wdr43	98	53.719	ENSMNEG00000035036	WDR43	97	53.514	Macaca_nemestrina
ENSCSEG00000016372	wdr43	87	53.484	ENSMLEG00000022852	WDR43	80	53.298	Mandrillus_leucophaeus
ENSCSEG00000016372	wdr43	98	84.615	ENSMAMG00000014056	wdr43	98	84.679	Mastacembelus_armatus
ENSCSEG00000016372	wdr43	99	82.968	ENSMZEG00005009095	wdr43	99	81.734	Maylandia_zebra
ENSCSEG00000016372	wdr43	87	55.535	ENSMGAG00000005248	WDR43	95	55.654	Meleagris_gallopavo
ENSCSEG00000016372	wdr43	98	50.328	ENSMAUG00000007339	Wdr43	92	50.470	Mesocricetus_auratus
ENSCSEG00000016372	wdr43	98	54.050	ENSMICG00000014276	WDR43	92	54.101	Microcebus_murinus
ENSCSEG00000016372	wdr43	98	52.815	ENSMOCG00000017279	Wdr43	96	51.657	Microtus_ochrogaster
ENSCSEG00000016372	wdr43	99	80.602	ENSMMOG00000004782	wdr43	99	79.598	Mola_mola
ENSCSEG00000016372	wdr43	98	52.562	ENSMODG00000015545	WDR43	92	52.997	Monodelphis_domestica
ENSCSEG00000016372	wdr43	69	79.515	ENSMALG00000007866	wdr43	98	79.515	Monopterus_albus
ENSCSEG00000016372	wdr43	100	51.387	MGP_CAROLIEiJ_G0021861	Wdr43	92	53.386	Mus_caroli
ENSCSEG00000016372	wdr43	98	53.311	ENSMUSG00000041057	Wdr43	96	52.410	Mus_musculus
ENSCSEG00000016372	wdr43	96	53.741	MGP_PahariEiJ_G0020848	Wdr43	96	52.108	Mus_pahari
ENSCSEG00000016372	wdr43	98	53.146	MGP_SPRETEiJ_G0022772	Wdr43	99	51.395	Mus_spretus
ENSCSEG00000016372	wdr43	98	53.936	ENSMPUG00000017985	WDR43	95	52.432	Mustela_putorius_furo
ENSCSEG00000016372	wdr43	98	51.325	ENSMLUG00000010666	WDR43	92	51.664	Myotis_lucifugus
ENSCSEG00000016372	wdr43	98	52.727	ENSNGAG00000004446	Wdr43	93	52.126	Nannospalax_galili
ENSCSEG00000016372	wdr43	99	82.968	ENSNBRG00000011062	wdr43	99	81.734	Neolamprologus_brichardi
ENSCSEG00000016372	wdr43	98	53.719	ENSNLEG00000015361	WDR43	92	53.628	Nomascus_leucogenys
ENSCSEG00000016372	wdr43	90	43.636	ENSOPRG00000007219	WDR43	92	45.520	Ochotona_princeps
ENSCSEG00000016372	wdr43	98	53.058	ENSODEG00000006870	WDR43	92	53.155	Octodon_degus
ENSCSEG00000016372	wdr43	99	83.474	ENSONIG00000019540	wdr43	99	82.508	Oreochromis_niloticus
ENSCSEG00000016372	wdr43	88	55.720	ENSOANG00000014467	WDR43	93	55.676	Ornithorhynchus_anatinus
ENSCSEG00000016372	wdr43	98	53.884	ENSOCUG00000003126	WDR43	91	53.943	Oryctolagus_cuniculus
ENSCSEG00000016372	wdr43	99	79.661	ENSORLG00000018236	wdr43	99	77.709	Oryzias_latipes
ENSCSEG00000016372	wdr43	99	79.831	ENSORLG00020008182	wdr43	99	77.709	Oryzias_latipes_hni
ENSCSEG00000016372	wdr43	99	79.831	ENSORLG00015005256	wdr43	99	77.864	Oryzias_latipes_hsok
ENSCSEG00000016372	wdr43	99	80.000	ENSOMEG00000009928	wdr43	90	78.019	Oryzias_melastigma
ENSCSEG00000016372	wdr43	96	54.160	ENSOGAG00000009879	WDR43	94	52.030	Otolemur_garnettii
ENSCSEG00000016372	wdr43	69	54.009	ENSOARG00000019566	WDR43	89	54.084	Ovis_aries
ENSCSEG00000016372	wdr43	87	53.585	ENSPPAG00000041978	WDR43	91	53.488	Pan_paniscus
ENSCSEG00000016372	wdr43	98	53.099	ENSPPRG00000001900	WDR43	96	51.659	Panthera_pardus
ENSCSEG00000016372	wdr43	98	52.492	ENSPTIG00000005982	WDR43	98	49.926	Panthera_tigris_altaica
ENSCSEG00000016372	wdr43	98	53.719	ENSPTRG00000011792	WDR43	92	53.628	Pan_troglodytes
ENSCSEG00000016372	wdr43	98	53.554	ENSPANG00000018846	WDR43	96	53.355	Papio_anubis
ENSCSEG00000016372	wdr43	100	68.079	ENSPKIG00000022935	wdr43	99	67.945	Paramormyrops_kingsleyae
ENSCSEG00000016372	wdr43	73	53.280	ENSPSIG00000014217	WDR43	98	53.226	Pelodiscus_sinensis
ENSCSEG00000016372	wdr43	99	77.722	ENSPMGG00000001169	wdr43	98	75.542	Periophthalmus_magnuspinnatus
ENSCSEG00000016372	wdr43	98	53.642	ENSPEMG00000021715	Wdr43	96	52.324	Peromyscus_maniculatus_bairdii
ENSCSEG00000016372	wdr43	96	47.980	ENSPMAG00000006054	wdr43	98	47.980	Petromyzon_marinus
ENSCSEG00000016372	wdr43	98	52.397	ENSPCIG00000011948	WDR43	98	52.472	Phascolarctos_cinereus
ENSCSEG00000016372	wdr43	98	80.855	ENSPFOG00000011371	wdr43	99	78.328	Poecilia_formosa
ENSCSEG00000016372	wdr43	98	80.342	ENSPLAG00000002041	wdr43	99	77.864	Poecilia_latipinna
ENSCSEG00000016372	wdr43	98	80.684	ENSPMEG00000020902	wdr43	99	80.066	Poecilia_mexicana
ENSCSEG00000016372	wdr43	98	80.342	ENSPREG00000004959	wdr43	99	77.898	Poecilia_reticulata
ENSCSEG00000016372	wdr43	96	54.329	ENSPPYG00000012526	WDR43	87	53.785	Pongo_abelii
ENSCSEG00000016372	wdr43	94	50.957	ENSPCAG00000011610	WDR43	89	48.734	Procavia_capensis
ENSCSEG00000016372	wdr43	98	53.884	ENSPCOG00000000476	WDR43	92	53.943	Propithecus_coquereli
ENSCSEG00000016372	wdr43	96	48.896	ENSPVAG00000013850	WDR43	87	49.057	Pteropus_vampyrus
ENSCSEG00000016372	wdr43	99	83.137	ENSPNYG00000023080	wdr43	99	81.889	Pundamilia_nyererei
ENSCSEG00000016372	wdr43	98	69.900	ENSPNAG00000023664	wdr43	99	67.873	Pygocentrus_nattereri
ENSCSEG00000016372	wdr43	100	51.023	ENSRNOG00000026316	Wdr43	93	52.756	Rattus_norvegicus
ENSCSEG00000016372	wdr43	98	53.388	ENSRBIG00000026670	WDR43	95	52.057	Rhinopithecus_bieti
ENSCSEG00000016372	wdr43	98	53.388	ENSRROG00000035929	WDR43	92	53.312	Rhinopithecus_roxellana
ENSCSEG00000016372	wdr43	98	54.711	ENSSBOG00000021596	WDR43	92	54.574	Saimiri_boliviensis_boliviensis
ENSCSEG00000016372	wdr43	98	52.893	ENSSHAG00000009672	WDR43	94	53.312	Sarcophilus_harrisii
ENSCSEG00000016372	wdr43	100	49.622	ENSSFOG00015004013	-	100	50.558	Scleropages_formosus
ENSCSEG00000016372	wdr43	100	68.684	ENSSFOG00015007173	wdr43	89	68.702	Scleropages_formosus
ENSCSEG00000016372	wdr43	98	83.590	ENSSMAG00000015328	wdr43	99	81.818	Scophthalmus_maximus
ENSCSEG00000016372	wdr43	98	86.154	ENSSDUG00000018532	wdr43	99	84.544	Seriola_dumerili
ENSCSEG00000016372	wdr43	98	86.325	ENSSLDG00000015626	wdr43	99	85.900	Seriola_lalandi_dorsalis
ENSCSEG00000016372	wdr43	80	54.772	ENSSARG00000013358	WDR43	78	54.217	Sorex_araneus
ENSCSEG00000016372	wdr43	98	52.790	ENSSPUG00000006260	WDR43	92	54.240	Sphenodon_punctatus
ENSCSEG00000016372	wdr43	98	83.932	ENSSPAG00000002830	wdr43	95	83.855	Stegastes_partitus
ENSCSEG00000016372	wdr43	98	53.300	ENSSSCG00000008536	WDR43	92	53.470	Sus_scrofa
ENSCSEG00000016372	wdr43	97	54.439	ENSTGUG00000005464	WDR43	95	54.428	Taeniopygia_guttata
ENSCSEG00000016372	wdr43	98	78.535	ENSTRUG00000009764	wdr43	99	76.425	Takifugu_rubripes
ENSCSEG00000016372	wdr43	98	78.902	ENSTNIG00000008907	wdr43	99	77.209	Tetraodon_nigroviridis
ENSCSEG00000016372	wdr43	87	53.861	ENSTBEG00000007577	WDR43	100	53.861	Tupaia_belangeri
ENSCSEG00000016372	wdr43	87	53.484	ENSTTRG00000008268	WDR43	76	53.309	Tursiops_truncatus
ENSCSEG00000016372	wdr43	98	52.727	ENSUAMG00000015504	WDR43	96	51.351	Ursus_americanus
ENSCSEG00000016372	wdr43	98	52.727	ENSUMAG00000020071	WDR43	96	51.351	Ursus_maritimus
ENSCSEG00000016372	wdr43	68	50.000	ENSVPAG00000001632	WDR43	60	50.554	Vicugna_pacos
ENSCSEG00000016372	wdr43	98	52.931	ENSVVUG00000002890	WDR43	98	52.419	Vulpes_vulpes
ENSCSEG00000016372	wdr43	95	81.770	ENSXCOG00000011240	wdr43	99	75.039	Xiphophorus_couchianus
ENSCSEG00000016372	wdr43	98	80.855	ENSXMAG00000018379	wdr43	99	78.207	Xiphophorus_maculatus