EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000016431 (Gene tree)
Gene ID: 103394937
Gene Symbol: larp1
Alias: wu:fb92d03|wu:fd15e07
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 32579 bases
Position: chr19:4419168-4451746
Accession: 103394937
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000025755	La	PF05383.17	1.7e-20	1	1
ENSCSEP00000025771	La	PF05383.17	1.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000026092	-	8959	XM_008332430	ENSCSEP00000025755	1069 (aa)	XP_008330652	UPI0004962495
ENSCSET00000026108	-	8584	XM_008332423	ENSCSEP00000025771	1093 (aa)	XP_008330647	UPI0004965BFA

Gene Model

Click here to download ENSCSEG00000016431's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000016431's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000016431	larp1	87	53.185	ENSCSEG00000013519	larp1b	92	52.190

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000016431	larp1	88	67.105	ENSG00000155506	LARP1	90	79.394	Homo_sapiens
ENSCSEG00000016431	larp1	87	97.248	ENSAPOG00000020685	larp1	99	97.248	Acanthochromis_polyacanthus
ENSCSEG00000016431	larp1	86	69.078	ENSAMEG00000016673	LARP1	98	68.421	Ailuropoda_melanoleuca
ENSCSEG00000016431	larp1	100	79.706	ENSACIG00000012994	larp1	100	78.421	Amphilophus_citrinellus
ENSCSEG00000016431	larp1	79	92.353	ENSAOCG00000007792	larp1	100	91.745	Amphiprion_ocellaris
ENSCSEG00000016431	larp1	100	89.405	ENSAPEG00000022246	larp1	100	88.609	Amphiprion_percula
ENSCSEG00000016431	larp1	99	86.194	ENSATEG00000013523	larp1	100	86.828	Anabas_testudineus
ENSCSEG00000016431	larp1	82	72.180	ENSAPLG00000007559	LARP1	99	72.289	Anas_platyrhynchos
ENSCSEG00000016431	larp1	89	68.681	ENSACAG00000004071	LARP1	95	73.341	Anolis_carolinensis
ENSCSEG00000016431	larp1	87	68.079	ENSANAG00000029949	LARP1	98	65.468	Aotus_nancymaae
ENSCSEG00000016431	larp1	100	87.557	ENSACLG00000015256	larp1	99	90.946	Astatotilapia_calliptera
ENSCSEG00000016431	larp1	99	76.443	ENSAMXG00000000859	larp1	98	77.926	Astyanax_mexicanus
ENSCSEG00000016431	larp1	96	64.286	ENSBTAG00000008443	LARP1	99	63.129	Bos_taurus
ENSCSEG00000016431	larp1	97	64.593	ENSCJAG00000004454	LARP1	99	63.489	Callithrix_jacchus
ENSCSEG00000016431	larp1	87	68.351	ENSCAFG00000017639	LARP1	99	68.394	Canis_familiaris
ENSCSEG00000016431	larp1	81	70.078	ENSCAFG00020023860	LARP1	97	70.134	Canis_lupus_dingo
ENSCSEG00000016431	larp1	96	64.037	ENSCHIG00000014414	LARP1	99	61.622	Capra_hircus
ENSCSEG00000016431	larp1	87	68.769	ENSTSYG00000013732	LARP1	98	66.285	Carlito_syrichta
ENSCSEG00000016431	larp1	78	68.728	ENSCAPG00000013865	LARP1	85	68.728	Cavia_aperea
ENSCSEG00000016431	larp1	86	68.257	ENSCPOG00000003377	LARP1	97	68.730	Cavia_porcellus
ENSCSEG00000016431	larp1	97	64.318	ENSCCAG00000025201	LARP1	99	63.579	Cebus_capucinus
ENSCSEG00000016431	larp1	96	62.661	ENSCATG00000030675	LARP1	96	66.036	Cercocebus_atys
ENSCSEG00000016431	larp1	90	67.335	ENSCLAG00000012755	LARP1	98	66.805	Chinchilla_lanigera
ENSCSEG00000016431	larp1	81	67.222	ENSCSAG00000010800	LARP1	97	67.486	Chlorocebus_sabaeus
ENSCSEG00000016431	larp1	84	65.043	ENSCHOG00000012716	LARP1	89	65.739	Choloepus_hoffmanni
ENSCSEG00000016431	larp1	88	73.306	ENSCPBG00000002173	LARP1	92	72.718	Chrysemys_picta_bellii
ENSCSEG00000016431	larp1	89	66.432	ENSCANG00000037418	LARP1	96	66.300	Colobus_angolensis_palliatus
ENSCSEG00000016431	larp1	99	64.481	ENSCGRG00001016913	Larp1	99	63.430	Cricetulus_griseus_chok1gshd
ENSCSEG00000016431	larp1	85	65.705	ENSCGRG00000009916	Larp1	100	65.491	Cricetulus_griseus_crigri
ENSCSEG00000016431	larp1	99	85.005	ENSCVAG00000022687	larp1	100	85.727	Cyprinodon_variegatus
ENSCSEG00000016431	larp1	99	69.274	ENSDARG00000101722	larp1	99	69.619	Danio_rerio
ENSCSEG00000016431	larp1	99	63.450	ENSDNOG00000012073	LARP1	99	62.803	Dasypus_novemcinctus
ENSCSEG00000016431	larp1	87	65.437	ENSDORG00000002897	Larp1	97	65.696	Dipodomys_ordii
ENSCSEG00000016431	larp1	82	69.604	ENSETEG00000020251	LARP1	100	69.383	Echinops_telfairi
ENSCSEG00000016431	larp1	97	63.777	ENSEASG00005001070	LARP1	99	62.847	Equus_asinus_asinus
ENSCSEG00000016431	larp1	97	63.727	ENSECAG00000017002	LARP1	78	63.748	Equus_caballus
ENSCSEG00000016431	larp1	83	65.835	ENSEEUG00000001065	LARP1	97	65.812	Erinaceus_europaeus
ENSCSEG00000016431	larp1	99	79.025	ENSELUG00000019403	larp1	99	79.833	Esox_lucius
ENSCSEG00000016431	larp1	97	63.902	ENSFCAG00000000592	LARP1	99	63.596	Felis_catus
ENSCSEG00000016431	larp1	78	73.373	ENSFALG00000008335	LARP1	98	72.082	Ficedula_albicollis
ENSCSEG00000016431	larp1	85	69.427	ENSFDAG00000021125	LARP1	98	68.295	Fukomys_damarensis
ENSCSEG00000016431	larp1	63	76.667	ENSFHEG00000020307	larp1	97	76.845	Fundulus_heteroclitus
ENSCSEG00000016431	larp1	99	66.944	ENSGALG00000040109	LARP1	94	72.632	Gallus_gallus
ENSCSEG00000016431	larp1	97	69.520	ENSGAGG00000025113	LARP1	94	74.400	Gopherus_agassizii
ENSCSEG00000016431	larp1	89	67.206	ENSGGOG00000006048	LARP1	93	67.243	Gorilla_gorilla
ENSCSEG00000016431	larp1	100	87.706	ENSHBUG00000020762	larp1	99	91.020	Haplochromis_burtoni
ENSCSEG00000016431	larp1	99	62.689	ENSHGLG00000006267	LARP1	98	62.922	Heterocephalus_glaber_female
ENSCSEG00000016431	larp1	87	68.008	ENSHGLG00100014230	-	98	68.339	Heterocephalus_glaber_male
ENSCSEG00000016431	larp1	89	58.180	ENSHGLG00100003395	-	91	57.805	Heterocephalus_glaber_male
ENSCSEG00000016431	larp1	90	92.927	ENSHCOG00000010786	larp1	99	92.910	Hippocampus_comes
ENSCSEG00000016431	larp1	90	75.805	ENSIPUG00000019105	Larp1	95	76.947	Ictalurus_punctatus
ENSCSEG00000016431	larp1	85	66.879	ENSSTOG00000005678	LARP1	98	66.008	Ictidomys_tridecemlineatus
ENSCSEG00000016431	larp1	97	60.544	ENSJJAG00000016950	Larp1	99	60.220	Jaculus_jaculus
ENSCSEG00000016431	larp1	100	86.047	ENSKMAG00000018468	larp1	98	90.282	Kryptolebias_marmoratus
ENSCSEG00000016431	larp1	99	85.901	ENSLBEG00000027172	larp1	100	85.005	Labrus_bergylta
ENSCSEG00000016431	larp1	94	77.151	ENSLOCG00000012457	larp1	99	77.052	Lepisosteus_oculatus
ENSCSEG00000016431	larp1	99	62.206	ENSLAFG00000008991	LARP1	99	62.125	Loxodonta_africana
ENSCSEG00000016431	larp1	85	68.816	ENSMFAG00000031651	LARP1	96	65.837	Macaca_fascicularis
ENSCSEG00000016431	larp1	87	65.531	ENSMMUG00000009411	LARP1	98	65.768	Macaca_mulatta
ENSCSEG00000016431	larp1	81	69.989	ENSMNEG00000039294	LARP1	97	69.754	Macaca_nemestrina
ENSCSEG00000016431	larp1	85	69.133	ENSMLEG00000035142	LARP1	96	66.135	Mandrillus_leucophaeus
ENSCSEG00000016431	larp1	100	88.054	ENSMAMG00000021788	larp1	100	87.602	Mastacembelus_armatus
ENSCSEG00000016431	larp1	100	87.557	ENSMZEG00005009345	larp1	99	90.946	Maylandia_zebra
ENSCSEG00000016431	larp1	88	70.764	ENSMGAG00000005696	LARP1	98	71.654	Meleagris_gallopavo
ENSCSEG00000016431	larp1	99	64.234	ENSMAUG00000001385	Larp1	99	63.843	Mesocricetus_auratus
ENSCSEG00000016431	larp1	87	67.288	ENSMICG00000000837	LARP1	97	70.011	Microcebus_murinus
ENSCSEG00000016431	larp1	99	64.481	ENSMOCG00000008920	Larp1	99	63.505	Microtus_ochrogaster
ENSCSEG00000016431	larp1	95	65.090	ENSMMOG00000013364	larp1	99	67.171	Mola_mola
ENSCSEG00000016431	larp1	88	68.699	ENSMODG00000008663	LARP1	98	69.286	Monodelphis_domestica
ENSCSEG00000016431	larp1	100	86.715	ENSMALG00000017180	larp1	100	86.078	Monopterus_albus
ENSCSEG00000016431	larp1	99	64.620	MGP_CAROLIEiJ_G0016383	Larp1	99	63.521	Mus_caroli
ENSCSEG00000016431	larp1	99	64.711	ENSMUSG00000037331	Larp1	99	63.612	Mus_musculus
ENSCSEG00000016431	larp1	99	64.428	MGP_PahariEiJ_G0017518	Larp1	99	63.463	Mus_pahari
ENSCSEG00000016431	larp1	99	63.702	MGP_SPRETEiJ_G0017225	Larp1	99	63.612	Mus_spretus
ENSCSEG00000016431	larp1	82	61.200	ENSMPUG00000013564	LARP1	99	61.176	Mustela_putorius_furo
ENSCSEG00000016431	larp1	87	65.503	ENSMLUG00000002608	LARP1	99	65.738	Myotis_lucifugus
ENSCSEG00000016431	larp1	87	66.737	ENSNGAG00000001098	Larp1	98	65.770	Nannospalax_galili
ENSCSEG00000016431	larp1	91	87.269	ENSNBRG00000008963	larp1	97	87.885	Neolamprologus_brichardi
ENSCSEG00000016431	larp1	87	67.218	ENSNLEG00000016588	LARP1	98	65.895	Nomascus_leucogenys
ENSCSEG00000016431	larp1	87	65.308	ENSMEUG00000002957	LARP1	98	65.231	Notamacropus_eugenii
ENSCSEG00000016431	larp1	86	67.975	ENSOPRG00000013014	LARP1	98	68.252	Ochotona_princeps
ENSCSEG00000016431	larp1	89	67.107	ENSODEG00000010824	LARP1	98	67.913	Octodon_degus
ENSCSEG00000016431	larp1	99	85.018	ENSONIG00000017308	larp1	99	85.910	Oreochromis_niloticus
ENSCSEG00000016431	larp1	91	69.085	ENSOANG00000005096	LARP1	97	70.558	Ornithorhynchus_anatinus
ENSCSEG00000016431	larp1	99	63.612	ENSOCUG00000013066	LARP1	99	63.399	Oryctolagus_cuniculus
ENSCSEG00000016431	larp1	100	83.380	ENSORLG00000000824	larp1	100	83.560	Oryzias_latipes
ENSCSEG00000016431	larp1	100	83.442	ENSORLG00020022241	larp1	100	83.349	Oryzias_latipes_hni
ENSCSEG00000016431	larp1	100	81.827	ENSORLG00015007538	larp1	100	82.961	Oryzias_latipes_hsok
ENSCSEG00000016431	larp1	100	80.855	ENSOMEG00000003134	larp1	100	82.336	Oryzias_melastigma
ENSCSEG00000016431	larp1	87	68.182	ENSOGAG00000016750	LARP1	98	68.017	Otolemur_garnettii
ENSCSEG00000016431	larp1	85	67.725	ENSOARG00000009893	LARP1	98	66.736	Ovis_aries
ENSCSEG00000016431	larp1	88	67.105	ENSPPAG00000042993	LARP1	92	68.046	Pan_paniscus
ENSCSEG00000016431	larp1	86	67.647	ENSPPRG00000009780	LARP1	93	66.494	Panthera_pardus
ENSCSEG00000016431	larp1	86	67.756	ENSPTIG00000007013	LARP1	93	66.909	Panthera_tigris_altaica
ENSCSEG00000016431	larp1	97	62.044	ENSPTRG00000017447	LARP1	99	61.026	Pan_troglodytes
ENSCSEG00000016431	larp1	96	62.569	ENSPANG00000008080	LARP1	96	66.135	Papio_anubis
ENSCSEG00000016431	larp1	98	67.724	ENSPKIG00000017153	-	99	68.395	Paramormyrops_kingsleyae
ENSCSEG00000016431	larp1	99	76.959	ENSPKIG00000010096	larp1	98	78.037	Paramormyrops_kingsleyae
ENSCSEG00000016431	larp1	95	79.862	ENSPMGG00000011599	larp1	98	80.550	Periophthalmus_magnuspinnatus
ENSCSEG00000016431	larp1	88	65.496	ENSPEMG00000022523	Larp1	98	65.596	Peromyscus_maniculatus_bairdii
ENSCSEG00000016431	larp1	96	66.075	ENSPCIG00000019242	LARP1	89	66.075	Phascolarctos_cinereus
ENSCSEG00000016431	larp1	100	82.597	ENSPFOG00000005836	larp1	100	82.475	Poecilia_formosa
ENSCSEG00000016431	larp1	100	82.949	ENSPLAG00000008936	larp1	100	83.010	Poecilia_latipinna
ENSCSEG00000016431	larp1	100	82.417	ENSPMEG00000013656	larp1	100	82.294	Poecilia_mexicana
ENSCSEG00000016431	larp1	89	85.087	ENSPREG00000005726	larp1	99	84.985	Poecilia_reticulata
ENSCSEG00000016431	larp1	87	65.770	ENSPCAG00000006407	LARP1	98	65.560	Procavia_capensis
ENSCSEG00000016431	larp1	86	62.863	ENSPCOG00000016949	LARP1	98	63.863	Propithecus_coquereli
ENSCSEG00000016431	larp1	97	64.208	ENSPVAG00000002262	LARP1	99	63.229	Pteropus_vampyrus
ENSCSEG00000016431	larp1	100	87.740	ENSPNYG00000007938	larp1	99	90.946	Pundamilia_nyererei
ENSCSEG00000016431	larp1	99	75.820	ENSPNAG00000021427	larp1	98	77.947	Pygocentrus_nattereri
ENSCSEG00000016431	larp1	88	65.942	ENSRNOG00000031544	Larp1	97	66.044	Rattus_norvegicus
ENSCSEG00000016431	larp1	89	66.066	ENSRBIG00000038005	LARP1	96	66.036	Rhinopithecus_bieti
ENSCSEG00000016431	larp1	91	66.006	ENSRROG00000034073	LARP1	97	69.643	Rhinopithecus_roxellana
ENSCSEG00000016431	larp1	90	66.634	ENSSBOG00000019816	LARP1	98	65.839	Saimiri_boliviensis_boliviensis
ENSCSEG00000016431	larp1	88	69.498	ENSSHAG00000011115	LARP1	98	70.397	Sarcophilus_harrisii
ENSCSEG00000016431	larp1	89	78.455	ENSSFOG00015020304	larp1	94	78.261	Scleropages_formosus
ENSCSEG00000016431	larp1	99	73.748	ENSSFOG00015018058	-	98	74.361	Scleropages_formosus
ENSCSEG00000016431	larp1	94	83.104	ENSSMAG00000007468	larp1	98	83.972	Scophthalmus_maximus
ENSCSEG00000016431	larp1	100	89.497	ENSSDUG00000000268	larp1	100	89.398	Seriola_dumerili
ENSCSEG00000016431	larp1	83	84.933	ENSSLDG00000016505	larp1	99	84.821	Seriola_lalandi_dorsalis
ENSCSEG00000016431	larp1	55	83.534	ENSSARG00000013907	-	85	81.538	Sorex_araneus
ENSCSEG00000016431	larp1	99	66.187	ENSSPUG00000012179	-	97	67.004	Sphenodon_punctatus
ENSCSEG00000016431	larp1	100	88.991	ENSSPAG00000003910	larp1	100	88.349	Stegastes_partitus
ENSCSEG00000016431	larp1	97	64.149	ENSSSCG00000017069	LARP1	98	69.180	Sus_scrofa
ENSCSEG00000016431	larp1	85	72.086	ENSTGUG00000000704	LARP1	100	72.406	Taeniopygia_guttata
ENSCSEG00000016431	larp1	99	84.573	ENSTRUG00000009470	larp1	99	84.573	Takifugu_rubripes
ENSCSEG00000016431	larp1	82	67.952	ENSTBEG00000003381	LARP1	99	67.731	Tupaia_belangeri
ENSCSEG00000016431	larp1	86	67.958	ENSTTRG00000015934	LARP1	98	68.017	Tursiops_truncatus
ENSCSEG00000016431	larp1	97	63.942	ENSUAMG00000019334	LARP1	99	63.596	Ursus_americanus
ENSCSEG00000016431	larp1	88	65.851	ENSUMAG00000002934	LARP1	99	65.953	Ursus_maritimus
ENSCSEG00000016431	larp1	81	70.078	ENSVVUG00000004644	LARP1	97	70.134	Vulpes_vulpes
ENSCSEG00000016431	larp1	93	70.418	ENSXETG00000008413	larp1	92	72.062	Xenopus_tropicalis
ENSCSEG00000016431	larp1	87	82.222	ENSXCOG00000004022	larp1	99	81.890	Xiphophorus_couchianus
ENSCSEG00000016431	larp1	100	82.310	ENSXMAG00000018780	larp1	100	82.098	Xiphophorus_maculatus