EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000016479 (Gene tree)
Gene ID: 103398813
Gene Symbol: ercc3
Alias: wu:fc25f08|xpb
Full Name: ERCC excision repair 3%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 6531 bases
Position: chrKI934286.1:80290-86820
Accession: 103398813
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000025795	ResIII	PF04851.15	1.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000026131	-	3095	XM_008337553	ENSCSEP00000025795	785 (aa)	XP_008335775	UPI0004961FF2

Gene Model

Click here to download ENSCSEG00000016479's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03022	Basal transcription factors	KEGG
csem03420	Nucleotide excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000016479's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000016479	ercc3	100	86.531	ENSG00000163161	ERCC3	99	96.273	Homo_sapiens
ENSCSEG00000016479	ercc3	100	92.994	ENSAPOG00000014383	ercc3	100	92.994	Acanthochromis_polyacanthus
ENSCSEG00000016479	ercc3	100	86.785	ENSAMEG00000016840	ERCC3	100	86.785	Ailuropoda_melanoleuca
ENSCSEG00000016479	ercc3	98	93.023	ENSACIG00000000126	ercc3	99	93.023	Amphilophus_citrinellus
ENSCSEG00000016479	ercc3	100	93.121	ENSAOCG00000009396	ercc3	100	93.248	Amphiprion_ocellaris
ENSCSEG00000016479	ercc3	100	92.994	ENSAPEG00000023077	ercc3	100	93.121	Amphiprion_percula
ENSCSEG00000016479	ercc3	100	92.484	ENSATEG00000014860	ercc3	100	92.484	Anabas_testudineus
ENSCSEG00000016479	ercc3	91	87.079	ENSAPLG00000012068	ERCC3	98	87.079	Anas_platyrhynchos
ENSCSEG00000016479	ercc3	92	87.466	ENSACAG00000009919	ERCC3	100	87.466	Anolis_carolinensis
ENSCSEG00000016479	ercc3	100	86.658	ENSANAG00000031091	ERCC3	100	86.658	Aotus_nancymaae
ENSCSEG00000016479	ercc3	100	94.013	ENSACLG00000022508	ercc3	100	94.013	Astatotilapia_calliptera
ENSCSEG00000016479	ercc3	100	90.191	ENSAMXG00000036947	ercc3	100	90.191	Astyanax_mexicanus
ENSCSEG00000016479	ercc3	100	86.150	ENSBTAG00000020777	ERCC3	100	86.023	Bos_taurus
ENSCSEG00000016479	ercc3	96	63.542	WBGene00013441	xpb-1	96	63.554	Caenorhabditis_elegans
ENSCSEG00000016479	ercc3	100	86.531	ENSCJAG00000010416	ERCC3	100	86.531	Callithrix_jacchus
ENSCSEG00000016479	ercc3	97	87.879	ENSCAFG00000004497	ERCC3	100	86.277	Canis_familiaris
ENSCSEG00000016479	ercc3	97	87.879	ENSCAFG00020003495	ERCC3	100	86.277	Canis_lupus_dingo
ENSCSEG00000016479	ercc3	100	86.404	ENSCHIG00000014551	ERCC3	100	86.277	Capra_hircus
ENSCSEG00000016479	ercc3	99	85.990	ENSTSYG00000004137	ERCC3	99	85.990	Carlito_syrichta
ENSCSEG00000016479	ercc3	78	79.935	ENSCAPG00000017027	ERCC3	93	79.675	Cavia_aperea
ENSCSEG00000016479	ercc3	100	85.133	ENSCPOG00000002144	ERCC3	100	85.133	Cavia_porcellus
ENSCSEG00000016479	ercc3	100	86.531	ENSCCAG00000024421	ERCC3	100	86.531	Cebus_capucinus
ENSCSEG00000016479	ercc3	100	86.531	ENSCATG00000032313	ERCC3	100	86.531	Cercocebus_atys
ENSCSEG00000016479	ercc3	100	85.515	ENSCLAG00000002965	ERCC3	96	85.515	Chinchilla_lanigera
ENSCSEG00000016479	ercc3	100	86.404	ENSCSAG00000016827	ERCC3	100	86.404	Chlorocebus_sabaeus
ENSCSEG00000016479	ercc3	83	94.152	ENSCHOG00000007414	ERCC3	83	94.152	Choloepus_hoffmanni
ENSCSEG00000016479	ercc3	92	88.382	ENSCPBG00000013638	ERCC3	100	88.382	Chrysemys_picta_bellii
ENSCSEG00000016479	ercc3	96	71.001	ENSCING00000002867	ercc3	96	71.001	Ciona_intestinalis
ENSCSEG00000016479	ercc3	100	86.658	ENSCANG00000007094	ERCC3	100	86.658	Colobus_angolensis_palliatus
ENSCSEG00000016479	ercc3	100	86.277	ENSCGRG00001009426	Ercc3	100	86.277	Cricetulus_griseus_chok1gshd
ENSCSEG00000016479	ercc3	97	86.089	ENSCGRG00000015547	Ercc3	100	86.089	Cricetulus_griseus_crigri
ENSCSEG00000016479	ercc3	100	90.955	ENSCVAG00000015177	ercc3	100	91.338	Cyprinodon_variegatus
ENSCSEG00000016479	ercc3	97	91.953	ENSDARG00000002402	ercc3	100	90.701	Danio_rerio
ENSCSEG00000016479	ercc3	56	91.422	ENSDNOG00000035027	ERCC3	95	91.422	Dasypus_novemcinctus
ENSCSEG00000016479	ercc3	96	88.375	ENSDORG00000004671	Ercc3	100	86.658	Dipodomys_ordii
ENSCSEG00000016479	ercc3	99	67.207	FBgn0001179	hay	99	67.250	Drosophila_melanogaster
ENSCSEG00000016479	ercc3	90	88.254	ENSETEG00000019887	ERCC3	90	88.254	Echinops_telfairi
ENSCSEG00000016479	ercc3	100	79.699	ENSEBUG00000009773	ercc3	100	79.397	Eptatretus_burgeri
ENSCSEG00000016479	ercc3	100	84.139	ENSEASG00005022466	ERCC3	100	83.767	Equus_asinus_asinus
ENSCSEG00000016479	ercc3	100	85.896	ENSECAG00000006589	ERCC3	100	85.896	Equus_caballus
ENSCSEG00000016479	ercc3	93	87.260	ENSEEUG00000001057	ERCC3	99	87.260	Erinaceus_europaeus
ENSCSEG00000016479	ercc3	100	88.804	ENSELUG00000000089	ercc3	99	88.804	Esox_lucius
ENSCSEG00000016479	ercc3	100	86.531	ENSFCAG00000006989	ERCC3	100	86.531	Felis_catus
ENSCSEG00000016479	ercc3	99	85.000	ENSFALG00000003936	ERCC3	99	85.000	Ficedula_albicollis
ENSCSEG00000016479	ercc3	100	85.787	ENSFDAG00000011924	ERCC3	100	85.787	Fukomys_damarensis
ENSCSEG00000016479	ercc3	100	90.828	ENSFHEG00000005185	ercc3	100	90.828	Fundulus_heteroclitus
ENSCSEG00000016479	ercc3	100	87.771	ENSGMOG00000018032	ercc3	99	87.771	Gadus_morhua
ENSCSEG00000016479	ercc3	96	86.939	ENSGALG00000011515	ERCC3	100	85.025	Gallus_gallus
ENSCSEG00000016479	ercc3	100	91.465	ENSGAFG00000011936	ercc3	100	91.465	Gambusia_affinis
ENSCSEG00000016479	ercc3	100	90.458	ENSGACG00000015218	ercc3	100	90.458	Gasterosteus_aculeatus
ENSCSEG00000016479	ercc3	92	88.243	ENSGAGG00000018579	ERCC3	100	88.243	Gopherus_agassizii
ENSCSEG00000016479	ercc3	100	86.531	ENSGGOG00000015255	ERCC3	100	86.531	Gorilla_gorilla
ENSCSEG00000016479	ercc3	100	94.013	ENSHBUG00000003818	ercc3	100	94.013	Haplochromis_burtoni
ENSCSEG00000016479	ercc3	100	86.023	ENSHGLG00000011014	ERCC3	100	85.896	Heterocephalus_glaber_female
ENSCSEG00000016479	ercc3	100	86.023	ENSHGLG00100013806	ERCC3	100	85.896	Heterocephalus_glaber_male
ENSCSEG00000016479	ercc3	100	90.064	ENSHCOG00000016924	ercc3	100	90.064	Hippocampus_comes
ENSCSEG00000016479	ercc3	100	89.427	ENSIPUG00000021000	ercc3	100	89.427	Ictalurus_punctatus
ENSCSEG00000016479	ercc3	100	86.023	ENSSTOG00000011001	ERCC3	100	86.023	Ictidomys_tridecemlineatus
ENSCSEG00000016479	ercc3	90	86.338	ENSJJAG00000001117	Ercc3	100	86.338	Jaculus_jaculus
ENSCSEG00000016479	ercc3	100	91.720	ENSKMAG00000021764	ercc3	100	91.720	Kryptolebias_marmoratus
ENSCSEG00000016479	ercc3	100	91.975	ENSLBEG00000000468	ercc3	100	91.975	Labrus_bergylta
ENSCSEG00000016479	ercc3	96	83.594	ENSLACG00000014815	ERCC3	100	82.080	Latimeria_chalumnae
ENSCSEG00000016479	ercc3	89	87.712	ENSLOCG00000010907	ercc3	87	87.712	Lepisosteus_oculatus
ENSCSEG00000016479	ercc3	100	85.515	ENSLAFG00000014866	ERCC3	100	85.515	Loxodonta_africana
ENSCSEG00000016479	ercc3	100	86.531	ENSMFAG00000003370	ERCC3	100	86.531	Macaca_fascicularis
ENSCSEG00000016479	ercc3	100	82.811	ENSMNEG00000004215	ERCC3	100	82.811	Macaca_nemestrina
ENSCSEG00000016479	ercc3	100	86.531	ENSMLEG00000042061	ERCC3	100	86.531	Mandrillus_leucophaeus
ENSCSEG00000016479	ercc3	100	91.720	ENSMAMG00000004505	ercc3	99	91.720	Mastacembelus_armatus
ENSCSEG00000016479	ercc3	100	94.013	ENSMZEG00005004854	ercc3	100	94.013	Maylandia_zebra
ENSCSEG00000016479	ercc3	90	87.465	ENSMGAG00000011706	ERCC3	100	87.465	Meleagris_gallopavo
ENSCSEG00000016479	ercc3	100	86.294	ENSMAUG00000004515	Ercc3	100	86.294	Mesocricetus_auratus
ENSCSEG00000016479	ercc3	100	85.769	ENSMICG00000009578	ERCC3	100	85.769	Microcebus_murinus
ENSCSEG00000016479	ercc3	100	86.150	ENSMOCG00000021767	Ercc3	100	86.150	Microtus_ochrogaster
ENSCSEG00000016479	ercc3	98	91.462	ENSMMOG00000018174	ercc3	98	91.462	Mola_mola
ENSCSEG00000016479	ercc3	96	87.979	ENSMODG00000018695	ERCC3	100	86.785	Monodelphis_domestica
ENSCSEG00000016479	ercc3	100	91.847	ENSMALG00000014944	ercc3	100	91.975	Monopterus_albus
ENSCSEG00000016479	ercc3	100	86.658	MGP_CAROLIEiJ_G0022075	Ercc3	100	86.658	Mus_caroli
ENSCSEG00000016479	ercc3	100	86.404	ENSMUSG00000024382	Ercc3	100	86.404	Mus_musculus
ENSCSEG00000016479	ercc3	100	86.404	MGP_PahariEiJ_G0018809	Ercc3	100	86.404	Mus_pahari
ENSCSEG00000016479	ercc3	100	86.150	MGP_SPRETEiJ_G0022987	Ercc3	100	86.150	Mus_spretus
ENSCSEG00000016479	ercc3	100	86.277	ENSMPUG00000012021	ERCC3	100	86.277	Mustela_putorius_furo
ENSCSEG00000016479	ercc3	93	83.995	ENSMLUG00000007429	ERCC3	99	83.995	Myotis_lucifugus
ENSCSEG00000016479	ercc3	97	85.209	ENSNGAG00000019598	Ercc3	99	87.653	Nannospalax_galili
ENSCSEG00000016479	ercc3	100	94.013	ENSNBRG00000019074	ercc3	100	94.013	Neolamprologus_brichardi
ENSCSEG00000016479	ercc3	92	86.011	ENSNLEG00000015665	ERCC3	97	86.011	Nomascus_leucogenys
ENSCSEG00000016479	ercc3	100	84.117	ENSOPRG00000004553	ERCC3	100	84.117	Ochotona_princeps
ENSCSEG00000016479	ercc3	100	86.023	ENSODEG00000005795	ERCC3	100	86.023	Octodon_degus
ENSCSEG00000016479	ercc3	100	93.758	ENSONIG00000003255	ercc3	100	93.758	Oreochromis_niloticus
ENSCSEG00000016479	ercc3	100	86.277	ENSOCUG00000002248	ERCC3	100	86.277	Oryctolagus_cuniculus
ENSCSEG00000016479	ercc3	100	91.210	ENSORLG00000004393	ercc3	100	91.210	Oryzias_latipes
ENSCSEG00000016479	ercc3	100	91.083	ENSORLG00020017718	ercc3	99	92.152	Oryzias_latipes_hni
ENSCSEG00000016479	ercc3	100	91.083	ENSORLG00015015695	ercc3	100	91.083	Oryzias_latipes_hsok
ENSCSEG00000016479	ercc3	100	91.847	ENSOMEG00000015374	ercc3	100	91.847	Oryzias_melastigma
ENSCSEG00000016479	ercc3	100	85.896	ENSOGAG00000009103	ERCC3	100	85.896	Otolemur_garnettii
ENSCSEG00000016479	ercc3	100	86.404	ENSOARG00000016147	ERCC3	100	86.277	Ovis_aries
ENSCSEG00000016479	ercc3	100	86.531	ENSPPAG00000036166	ERCC3	100	86.531	Pan_paniscus
ENSCSEG00000016479	ercc3	100	86.658	ENSPPRG00000001305	ERCC3	100	86.658	Panthera_pardus
ENSCSEG00000016479	ercc3	92	88.243	ENSPTIG00000016969	ERCC3	100	88.243	Panthera_tigris_altaica
ENSCSEG00000016479	ercc3	100	86.531	ENSPTRG00000046940	ERCC3	100	86.531	Pan_troglodytes
ENSCSEG00000016479	ercc3	100	86.531	ENSPANG00000007699	ERCC3	100	86.531	Papio_anubis
ENSCSEG00000016479	ercc3	100	89.172	ENSPKIG00000001319	ercc3	100	90.489	Paramormyrops_kingsleyae
ENSCSEG00000016479	ercc3	92	87.828	ENSPSIG00000014682	ERCC3	100	87.828	Pelodiscus_sinensis
ENSCSEG00000016479	ercc3	96	91.534	ENSPMGG00000017885	ercc3	99	90.064	Periophthalmus_magnuspinnatus
ENSCSEG00000016479	ercc3	100	86.785	ENSPEMG00000013733	Ercc3	100	86.785	Peromyscus_maniculatus_bairdii
ENSCSEG00000016479	ercc3	90	78.601	ENSPMAG00000005081	ercc3	99	78.601	Petromyzon_marinus
ENSCSEG00000016479	ercc3	100	86.132	ENSPCIG00000011821	ERCC3	100	86.658	Phascolarctos_cinereus
ENSCSEG00000016479	ercc3	98	92.588	ENSPFOG00000015604	ercc3	100	91.720	Poecilia_formosa
ENSCSEG00000016479	ercc3	98	89.883	ENSPLAG00000022245	ercc3	100	93.213	Poecilia_latipinna
ENSCSEG00000016479	ercc3	98	92.588	ENSPMEG00000016987	ercc3	100	91.720	Poecilia_mexicana
ENSCSEG00000016479	ercc3	100	91.720	ENSPREG00000020921	ercc3	100	91.720	Poecilia_reticulata
ENSCSEG00000016479	ercc3	100	85.787	ENSPPYG00000012769	ERCC3	100	85.787	Pongo_abelii
ENSCSEG00000016479	ercc3	100	86.404	ENSPCOG00000024903	ERCC3	100	86.277	Propithecus_coquereli
ENSCSEG00000016479	ercc3	90	86.486	ENSPVAG00000013774	ERCC3	90	86.486	Pteropus_vampyrus
ENSCSEG00000016479	ercc3	100	94.013	ENSPNYG00000001208	ercc3	100	94.013	Pundamilia_nyererei
ENSCSEG00000016479	ercc3	100	90.828	ENSPNAG00000005748	ercc3	100	90.828	Pygocentrus_nattereri
ENSCSEG00000016479	ercc3	100	86.277	ENSRNOG00000013180	Ercc3	100	86.277	Rattus_norvegicus
ENSCSEG00000016479	ercc3	100	86.531	ENSRBIG00000027692	ERCC3	100	86.531	Rhinopithecus_bieti
ENSCSEG00000016479	ercc3	100	86.531	ENSRROG00000040673	ERCC3	100	86.531	Rhinopithecus_roxellana
ENSCSEG00000016479	ercc3	91	55.374	YIL143C	SSL2	85	55.389	Saccharomyces_cerevisiae
ENSCSEG00000016479	ercc3	100	86.150	ENSSBOG00000023079	ERCC3	100	86.150	Saimiri_boliviensis_boliviensis
ENSCSEG00000016479	ercc3	96	87.715	ENSSHAG00000007423	ERCC3	100	86.658	Sarcophilus_harrisii
ENSCSEG00000016479	ercc3	98	89.179	ENSSFOG00015012753	ercc3	100	88.280	Scleropages_formosus
ENSCSEG00000016479	ercc3	100	92.122	ENSSMAG00000011915	ercc3	100	92.122	Scophthalmus_maximus
ENSCSEG00000016479	ercc3	100	92.739	ENSSDUG00000021181	ercc3	100	92.739	Seriola_dumerili
ENSCSEG00000016479	ercc3	100	92.994	ENSSLDG00000008744	ercc3	98	92.994	Seriola_lalandi_dorsalis
ENSCSEG00000016479	ercc3	55	78.621	ENSSARG00000000751	-	85	78.621	Sorex_araneus
ENSCSEG00000016479	ercc3	90	86.460	ENSSPUG00000015183	ERCC3	91	86.460	Sphenodon_punctatus
ENSCSEG00000016479	ercc3	100	93.121	ENSSPAG00000004748	ercc3	100	93.121	Stegastes_partitus
ENSCSEG00000016479	ercc3	100	86.277	ENSSSCG00000015721	ERCC3	100	87.937	Sus_scrofa
ENSCSEG00000016479	ercc3	99	85.494	ENSTGUG00000004920	-	100	86.393	Taeniopygia_guttata
ENSCSEG00000016479	ercc3	100	89.936	ENSTRUG00000017185	ercc3	100	89.809	Takifugu_rubripes
ENSCSEG00000016479	ercc3	97	87.696	ENSTNIG00000005457	ercc3	99	88.786	Tetraodon_nigroviridis
ENSCSEG00000016479	ercc3	80	87.937	ENSTBEG00000009381	ERCC3	81	87.937	Tupaia_belangeri
ENSCSEG00000016479	ercc3	68	92.467	ENSUAMG00000009589	-	100	92.467	Ursus_americanus
ENSCSEG00000016479	ercc3	100	86.785	ENSUMAG00000008361	ERCC3	100	86.785	Ursus_maritimus
ENSCSEG00000016479	ercc3	92	87.967	ENSVVUG00000010431	ERCC3	100	87.967	Vulpes_vulpes
ENSCSEG00000016479	ercc3	100	85.425	ENSXETG00000033646	ercc3	100	85.425	Xenopus_tropicalis
ENSCSEG00000016479	ercc3	98	91.850	ENSXCOG00000001791	ercc3	99	91.850	Xiphophorus_couchianus
ENSCSEG00000016479	ercc3	100	91.975	ENSXMAG00000003641	ercc3	100	91.975	Xiphophorus_maculatus