EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000016539 (Gene tree)
Gene ID: 103390184
Gene Symbol: exosc2 (1 of many)
Alias: fa97b01|wu:fa97b01|zgc:110117
Full Name: exosome complex component RRP4-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 6418 bases
Position: chr14:22489439-22495856
Accession: 103390184
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000025883	ECR1_N	PF14382.6	1.9e-16	1	1
ENSCSEP00000025888	ECR1_N	PF14382.6	1.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000026223	-	2877	-	ENSCSEP00000025883	291 (aa)	XP_008324135	UPI0004985409
ENSCSET00000026227	-	2877	XM_008325926	ENSCSEP00000025888	291 (aa)	XP_008324135	UPI0004985409

Gene Model

Click here to download ENSCSEG00000016539's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000016539's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000016539	exosc2	100	76.792	ENSG00000130713	EXOSC2	100	76.792	Homo_sapiens
ENSCSEG00000016539	exosc2	91	93.962	ENSAPOG00000008861	exosc2	97	93.962	Acanthochromis_polyacanthus
ENSCSEG00000016539	exosc2	100	77.133	ENSAMEG00000016239	EXOSC2	100	77.133	Ailuropoda_melanoleuca
ENSCSEG00000016539	exosc2	100	94.198	ENSACIG00000019054	exosc2	100	94.198	Amphilophus_citrinellus
ENSCSEG00000016539	exosc2	100	93.857	ENSAOCG00000004983	exosc2	100	93.857	Amphiprion_ocellaris
ENSCSEG00000016539	exosc2	100	93.857	ENSAOCG00000008577	exosc2	100	93.857	Amphiprion_ocellaris
ENSCSEG00000016539	exosc2	100	93.857	ENSAPEG00000014088	exosc2	100	93.857	Amphiprion_percula
ENSCSEG00000016539	exosc2	100	95.904	ENSATEG00000018680	exosc2	100	95.904	Anabas_testudineus
ENSCSEG00000016539	exosc2	93	80.586	ENSAPLG00000012516	EXOSC2	94	80.586	Anas_platyrhynchos
ENSCSEG00000016539	exosc2	99	76.207	ENSACAG00000002706	EXOSC2	99	76.207	Anolis_carolinensis
ENSCSEG00000016539	exosc2	100	93.857	ENSACLG00000013613	exosc2	100	93.857	Astatotilapia_calliptera
ENSCSEG00000016539	exosc2	100	86.441	ENSAMXG00000042605	exosc2	100	86.441	Astyanax_mexicanus
ENSCSEG00000016539	exosc2	100	77.816	ENSBTAG00000048071	EXOSC2	100	77.816	Bos_taurus
ENSCSEG00000016539	exosc2	91	43.284	WBGene00022232	exos-2	88	43.284	Caenorhabditis_elegans
ENSCSEG00000016539	exosc2	100	76.792	ENSCJAG00000020537	EXOSC2	100	76.792	Callithrix_jacchus
ENSCSEG00000016539	exosc2	99	76.370	ENSCAFG00000019941	EXOSC2	99	76.370	Canis_familiaris
ENSCSEG00000016539	exosc2	100	76.451	ENSCAFG00020024047	EXOSC2	100	76.451	Canis_lupus_dingo
ENSCSEG00000016539	exosc2	100	77.474	ENSCHIG00000021398	EXOSC2	100	77.474	Capra_hircus
ENSCSEG00000016539	exosc2	100	76.792	ENSTSYG00000001805	EXOSC2	100	76.792	Carlito_syrichta
ENSCSEG00000016539	exosc2	100	73.810	ENSCPOG00000005902	EXOSC2	100	73.810	Cavia_porcellus
ENSCSEG00000016539	exosc2	100	76.792	ENSCCAG00000019749	EXOSC2	100	76.792	Cebus_capucinus
ENSCSEG00000016539	exosc2	100	76.792	ENSCATG00000025389	-	100	76.792	Cercocebus_atys
ENSCSEG00000016539	exosc2	100	76.792	ENSCLAG00000006195	EXOSC2	100	76.792	Chinchilla_lanigera
ENSCSEG00000016539	exosc2	100	76.792	ENSCSAG00000014760	EXOSC2	100	76.792	Chlorocebus_sabaeus
ENSCSEG00000016539	exosc2	100	75.768	ENSCHOG00000000858	EXOSC2	100	75.768	Choloepus_hoffmanni
ENSCSEG00000016539	exosc2	99	76.712	ENSCPBG00000022626	EXOSC2	99	76.712	Chrysemys_picta_bellii
ENSCSEG00000016539	exosc2	96	63.251	ENSCING00000014934	-	94	63.251	Ciona_intestinalis
ENSCSEG00000016539	exosc2	91	67.159	ENSCSAVG00000003684	-	99	67.159	Ciona_savignyi
ENSCSEG00000016539	exosc2	99	70.205	ENSCANG00000029298	-	99	70.205	Colobus_angolensis_palliatus
ENSCSEG00000016539	exosc2	100	76.792	ENSCANG00000039828	-	100	76.792	Colobus_angolensis_palliatus
ENSCSEG00000016539	exosc2	100	77.133	ENSCGRG00001013981	Exosc2	100	77.133	Cricetulus_griseus_chok1gshd
ENSCSEG00000016539	exosc2	100	77.133	ENSCGRG00000017629	Exosc2	100	77.133	Cricetulus_griseus_crigri
ENSCSEG00000016539	exosc2	100	92.491	ENSCVAG00000022260	exosc2	100	92.491	Cyprinodon_variegatus
ENSCSEG00000016539	exosc2	100	81.017	ENSDARG00000028688	exosc2	100	81.017	Danio_rerio
ENSCSEG00000016539	exosc2	91	76.404	ENSDNOG00000025767	-	100	76.404	Dasypus_novemcinctus
ENSCSEG00000016539	exosc2	100	77.133	ENSDORG00000009238	Exosc2	100	77.133	Dipodomys_ordii
ENSCSEG00000016539	exosc2	95	59.567	FBgn0034879	Rrp4	93	59.928	Drosophila_melanogaster
ENSCSEG00000016539	exosc2	93	64.207	ENSETEG00000016130	-	98	64.207	Echinops_telfairi
ENSCSEG00000016539	exosc2	100	77.133	ENSEASG00005008475	EXOSC2	86	77.133	Equus_asinus_asinus
ENSCSEG00000016539	exosc2	100	77.133	ENSECAG00000007897	EXOSC2	86	77.133	Equus_caballus
ENSCSEG00000016539	exosc2	100	89.492	ENSELUG00000013641	exosc2	100	89.492	Esox_lucius
ENSCSEG00000016539	exosc2	100	76.792	ENSFCAG00000025936	EXOSC2	100	76.792	Felis_catus
ENSCSEG00000016539	exosc2	100	73.810	ENSFALG00000001446	EXOSC2	100	73.810	Ficedula_albicollis
ENSCSEG00000016539	exosc2	100	76.109	ENSFDAG00000017196	EXOSC2	100	76.109	Fukomys_damarensis
ENSCSEG00000016539	exosc2	100	93.174	ENSFHEG00000018571	exosc2	100	93.174	Fundulus_heteroclitus
ENSCSEG00000016539	exosc2	100	85.034	ENSGMOG00000011785	exosc2	99	85.034	Gadus_morhua
ENSCSEG00000016539	exosc2	99	79.452	ENSGALG00000040373	EXOSC2	99	79.452	Gallus_gallus
ENSCSEG00000016539	exosc2	99	91.781	ENSGAFG00000010283	exosc2	99	91.781	Gambusia_affinis
ENSCSEG00000016539	exosc2	100	91.126	ENSGACG00000016805	exosc2	99	91.126	Gasterosteus_aculeatus
ENSCSEG00000016539	exosc2	90	78.030	ENSGAGG00000021026	EXOSC2	99	78.030	Gopherus_agassizii
ENSCSEG00000016539	exosc2	100	76.109	ENSGGOG00000010578	EXOSC2	100	76.109	Gorilla_gorilla
ENSCSEG00000016539	exosc2	100	94.539	ENSHBUG00000022437	exosc2	100	94.539	Haplochromis_burtoni
ENSCSEG00000016539	exosc2	100	76.792	ENSHGLG00000012834	EXOSC2	100	76.792	Heterocephalus_glaber_female
ENSCSEG00000016539	exosc2	100	76.792	ENSHGLG00100007092	EXOSC2	100	76.792	Heterocephalus_glaber_male
ENSCSEG00000016539	exosc2	100	90.785	ENSHCOG00000019130	exosc2	100	90.785	Hippocampus_comes
ENSCSEG00000016539	exosc2	100	83.673	ENSIPUG00000015397	exosc2	100	83.673	Ictalurus_punctatus
ENSCSEG00000016539	exosc2	100	76.792	ENSSTOG00000005999	EXOSC2	100	76.792	Ictidomys_tridecemlineatus
ENSCSEG00000016539	exosc2	100	76.792	ENSJJAG00000003188	Exosc2	100	76.792	Jaculus_jaculus
ENSCSEG00000016539	exosc2	99	92.414	ENSKMAG00000017397	exosc2	99	92.414	Kryptolebias_marmoratus
ENSCSEG00000016539	exosc2	100	93.515	ENSLBEG00000019269	exosc2	100	93.515	Labrus_bergylta
ENSCSEG00000016539	exosc2	100	78.571	ENSLACG00000015530	EXOSC2	100	78.571	Latimeria_chalumnae
ENSCSEG00000016539	exosc2	100	76.531	ENSLAFG00000006984	EXOSC2	100	76.531	Loxodonta_africana
ENSCSEG00000016539	exosc2	100	76.792	ENSMFAG00000000597	-	100	76.792	Macaca_fascicularis
ENSCSEG00000016539	exosc2	100	66.212	ENSMFAG00000034160	-	84	66.212	Macaca_fascicularis
ENSCSEG00000016539	exosc2	100	73.720	ENSMMUG00000012498	EXOSC2	100	73.720	Macaca_mulatta
ENSCSEG00000016539	exosc2	100	66.894	ENSMNEG00000028704	-	91	66.894	Macaca_nemestrina
ENSCSEG00000016539	exosc2	100	76.792	ENSMNEG00000031861	-	100	76.792	Macaca_nemestrina
ENSCSEG00000016539	exosc2	100	76.792	ENSMLEG00000042587	-	100	76.792	Mandrillus_leucophaeus
ENSCSEG00000016539	exosc2	100	66.553	ENSMLEG00000029891	-	91	66.553	Mandrillus_leucophaeus
ENSCSEG00000016539	exosc2	100	94.881	ENSMAMG00000012466	exosc2	100	94.881	Mastacembelus_armatus
ENSCSEG00000016539	exosc2	100	93.515	ENSMZEG00005018737	exosc2	100	93.515	Maylandia_zebra
ENSCSEG00000016539	exosc2	99	79.110	ENSMGAG00000005450	EXOSC2	99	79.110	Meleagris_gallopavo
ENSCSEG00000016539	exosc2	100	77.133	ENSMAUG00000008299	Exosc2	100	77.133	Mesocricetus_auratus
ENSCSEG00000016539	exosc2	100	77.816	ENSMICG00000015495	EXOSC2	100	77.816	Microcebus_murinus
ENSCSEG00000016539	exosc2	100	77.474	ENSMOCG00000008262	Exosc2	100	77.474	Microtus_ochrogaster
ENSCSEG00000016539	exosc2	100	93.515	ENSMMOG00000009616	exosc2	100	93.515	Mola_mola
ENSCSEG00000016539	exosc2	100	76.451	ENSMODG00000012114	EXOSC2	100	76.451	Monodelphis_domestica
ENSCSEG00000016539	exosc2	100	94.881	ENSMALG00000022132	exosc2	100	94.881	Monopterus_albus
ENSCSEG00000016539	exosc2	100	76.792	MGP_CAROLIEiJ_G0023415	Exosc2	100	76.792	Mus_caroli
ENSCSEG00000016539	exosc2	100	76.792	ENSMUSG00000039356	Exosc2	100	76.792	Mus_musculus
ENSCSEG00000016539	exosc2	100	76.451	MGP_PahariEiJ_G0024872	Exosc2	100	76.451	Mus_pahari
ENSCSEG00000016539	exosc2	100	76.792	MGP_SPRETEiJ_G0024332	Exosc2	100	76.792	Mus_spretus
ENSCSEG00000016539	exosc2	100	77.133	ENSMPUG00000012686	EXOSC2	100	77.133	Mustela_putorius_furo
ENSCSEG00000016539	exosc2	100	77.288	ENSMLUG00000008776	EXOSC2	100	77.288	Myotis_lucifugus
ENSCSEG00000016539	exosc2	100	76.451	ENSNGAG00000019383	Exosc2	100	76.451	Nannospalax_galili
ENSCSEG00000016539	exosc2	100	94.198	ENSNBRG00000005453	exosc2	100	94.198	Neolamprologus_brichardi
ENSCSEG00000016539	exosc2	100	76.792	ENSNLEG00000012533	EXOSC2	100	76.792	Nomascus_leucogenys
ENSCSEG00000016539	exosc2	100	60.410	ENSMEUG00000000795	EXOSC2	100	60.410	Notamacropus_eugenii
ENSCSEG00000016539	exosc2	56	79.394	ENSOPRG00000008688	EXOSC2	56	79.394	Ochotona_princeps
ENSCSEG00000016539	exosc2	87	78.740	ENSODEG00000019513	-	100	78.740	Octodon_degus
ENSCSEG00000016539	exosc2	100	75.768	ENSODEG00000016880	-	100	75.768	Octodon_degus
ENSCSEG00000016539	exosc2	100	94.198	ENSONIG00000014086	exosc2	100	94.198	Oreochromis_niloticus
ENSCSEG00000016539	exosc2	100	74.061	ENSOANG00000001044	EXOSC2	100	74.061	Ornithorhynchus_anatinus
ENSCSEG00000016539	exosc2	100	77.474	ENSOCUG00000007138	EXOSC2	100	77.474	Oryctolagus_cuniculus
ENSCSEG00000016539	exosc2	100	92.491	ENSORLG00000007443	exosc2	100	92.491	Oryzias_latipes
ENSCSEG00000016539	exosc2	100	92.833	ENSORLG00020018902	exosc2	100	92.833	Oryzias_latipes_hni
ENSCSEG00000016539	exosc2	100	92.491	ENSORLG00015006767	exosc2	100	92.491	Oryzias_latipes_hsok
ENSCSEG00000016539	exosc2	100	92.833	ENSOMEG00000003533	exosc2	100	92.833	Oryzias_melastigma
ENSCSEG00000016539	exosc2	100	77.474	ENSOGAG00000007558	EXOSC2	100	77.474	Otolemur_garnettii
ENSCSEG00000016539	exosc2	100	77.288	ENSOARG00000007438	EXOSC2	100	77.288	Ovis_aries
ENSCSEG00000016539	exosc2	100	76.792	ENSPPAG00000034796	EXOSC2	100	76.792	Pan_paniscus
ENSCSEG00000016539	exosc2	100	77.133	ENSPPRG00000001089	EXOSC2	100	77.133	Panthera_pardus
ENSCSEG00000016539	exosc2	100	77.133	ENSPTIG00000021163	EXOSC2	100	77.133	Panthera_tigris_altaica
ENSCSEG00000016539	exosc2	100	76.792	ENSPTRG00000045766	-	100	76.792	Pan_troglodytes
ENSCSEG00000016539	exosc2	100	76.792	ENSPTRG00000021476	EXOSC2	100	76.792	Pan_troglodytes
ENSCSEG00000016539	exosc2	100	76.792	ENSPANG00000025966	EXOSC2	100	76.792	Papio_anubis
ENSCSEG00000016539	exosc2	100	82.877	ENSPKIG00000004271	exosc2	100	82.877	Paramormyrops_kingsleyae
ENSCSEG00000016539	exosc2	99	76.370	ENSPSIG00000006743	EXOSC2	99	76.370	Pelodiscus_sinensis
ENSCSEG00000016539	exosc2	87	94.466	ENSPMGG00000010980	exosc2	99	94.466	Periophthalmus_magnuspinnatus
ENSCSEG00000016539	exosc2	100	77.474	ENSPEMG00000006345	Exosc2	100	77.474	Peromyscus_maniculatus_bairdii
ENSCSEG00000016539	exosc2	93	77.778	ENSPMAG00000001280	exosc2	92	77.778	Petromyzon_marinus
ENSCSEG00000016539	exosc2	100	76.451	ENSPCIG00000024122	EXOSC2	97	76.451	Phascolarctos_cinereus
ENSCSEG00000016539	exosc2	99	92.150	ENSPFOG00000019819	exosc2	99	92.150	Poecilia_formosa
ENSCSEG00000016539	exosc2	99	92.466	ENSPLAG00000004605	exosc2	99	92.466	Poecilia_latipinna
ENSCSEG00000016539	exosc2	99	92.466	ENSPMEG00000010976	exosc2	99	92.466	Poecilia_mexicana
ENSCSEG00000016539	exosc2	99	92.123	ENSPREG00000014306	exosc2	99	92.123	Poecilia_reticulata
ENSCSEG00000016539	exosc2	100	76.792	ENSPPYG00000019695	EXOSC2	100	76.792	Pongo_abelii
ENSCSEG00000016539	exosc2	100	77.474	ENSPCAG00000013400	EXOSC2	100	77.474	Procavia_capensis
ENSCSEG00000016539	exosc2	100	77.133	ENSPCOG00000017639	EXOSC2	100	77.133	Propithecus_coquereli
ENSCSEG00000016539	exosc2	100	76.451	ENSPVAG00000001513	EXOSC2	100	76.451	Pteropus_vampyrus
ENSCSEG00000016539	exosc2	100	94.539	ENSPNYG00000007383	exosc2	100	94.539	Pundamilia_nyererei
ENSCSEG00000016539	exosc2	100	86.054	ENSPNAG00000014281	exosc2	100	86.054	Pygocentrus_nattereri
ENSCSEG00000016539	exosc2	100	76.451	ENSRNOG00000009245	Exosc2	100	76.451	Rattus_norvegicus
ENSCSEG00000016539	exosc2	100	76.792	ENSRBIG00000031203	-	100	76.792	Rhinopithecus_bieti
ENSCSEG00000016539	exosc2	99	70.548	ENSRBIG00000029791	-	99	70.548	Rhinopithecus_bieti
ENSCSEG00000016539	exosc2	100	76.792	ENSRROG00000010827	-	100	76.792	Rhinopithecus_roxellana
ENSCSEG00000016539	exosc2	99	69.521	ENSRROG00000043609	-	99	69.521	Rhinopithecus_roxellana
ENSCSEG00000016539	exosc2	90	41.528	YHR069C	-	84	41.528	Saccharomyces_cerevisiae
ENSCSEG00000016539	exosc2	100	76.451	ENSSBOG00000022712	EXOSC2	100	76.451	Saimiri_boliviensis_boliviensis
ENSCSEG00000016539	exosc2	100	76.451	ENSSHAG00000016050	EXOSC2	100	76.451	Sarcophilus_harrisii
ENSCSEG00000016539	exosc2	100	83.904	ENSSFOG00015011245	exosc2	100	83.904	Scleropages_formosus
ENSCSEG00000016539	exosc2	100	94.845	ENSSMAG00000003112	exosc2	100	94.845	Scophthalmus_maximus
ENSCSEG00000016539	exosc2	100	94.898	ENSSDUG00000004634	exosc2	100	94.898	Seriola_dumerili
ENSCSEG00000016539	exosc2	100	95.876	ENSSLDG00000010616	exosc2	100	95.876	Seriola_lalandi_dorsalis
ENSCSEG00000016539	exosc2	99	76.610	ENSSPUG00000013391	EXOSC2	99	76.610	Sphenodon_punctatus
ENSCSEG00000016539	exosc2	100	93.857	ENSSPAG00000022947	exosc2	100	93.857	Stegastes_partitus
ENSCSEG00000016539	exosc2	100	78.157	ENSSSCG00000005704	EXOSC2	100	78.157	Sus_scrofa
ENSCSEG00000016539	exosc2	99	73.973	ENSTGUG00000004697	EXOSC2	99	73.973	Taeniopygia_guttata
ENSCSEG00000016539	exosc2	100	84.983	ENSTRUG00000022436	exosc2	100	84.983	Takifugu_rubripes
ENSCSEG00000016539	exosc2	100	72.014	ENSTTRG00000015159	EXOSC2	100	72.014	Tursiops_truncatus
ENSCSEG00000016539	exosc2	95	75.090	ENSUAMG00000009651	EXOSC2	99	75.090	Ursus_americanus
ENSCSEG00000016539	exosc2	100	76.792	ENSUMAG00000018726	EXOSC2	100	76.792	Ursus_maritimus
ENSCSEG00000016539	exosc2	100	76.451	ENSVVUG00000027665	EXOSC2	100	76.451	Vulpes_vulpes
ENSCSEG00000016539	exosc2	100	75.768	ENSXETG00000001340	exosc2	100	75.768	Xenopus_tropicalis
ENSCSEG00000016539	exosc2	99	91.781	ENSXMAG00000005265	exosc2	99	91.781	Xiphophorus_maculatus