EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000016653 (Gene tree)
Gene ID: 103381919
Gene Symbol: polr3a
Alias: fb81e09|im:7139382|wu:fb81e09
Full Name: RNA polymerase III subunit A
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 15415 bases
Position: chr8:8843110-8858524
Accession: 103381919
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000026108	RNA_pol_Rpb1_5	PF04998.17	2.2e-88	1	1
ENSCSEP00000026108	RNA_pol_Rpb1_4	PF05000.17	1.1e-31	1	1
ENSCSEP00000026108	RNA_pol_Rpb1_2	PF00623.20	1.2e-72	1	1
ENSCSEP00000026108	RNA_pol_Rpb1_3	PF04983.18	1.7e-40	1	1
ENSCSEP00000026108	RNA_pol_Rpb1_1	PF04997.12	3.8e-94	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000026449	-	4345	XM_008314518	ENSCSEP00000026108	1390 (aa)	XP_008312740	UPI00049844B5

Gene Model

Click here to download ENSCSEG00000016653's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03020	RNA polymerase	KEGG
csem04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000016653's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000016653	polr3a	69	31.783	ENSCSEG00000020190	polr1a	64	31.783
ENSCSEG00000016653	polr3a	91	38.827	ENSCSEG00000002635	polr2a	68	38.865

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000016653	polr3a	100	89.928	ENSG00000148606	POLR3A	98	93.038	Homo_sapiens
ENSCSEG00000016653	polr3a	62	92.102	ENSAPOG00000022727	polr3a	99	92.102	Acanthochromis_polyacanthus
ENSCSEG00000016653	polr3a	100	89.663	ENSAMEG00000017801	POLR3A	100	89.663	Ailuropoda_melanoleuca
ENSCSEG00000016653	polr3a	94	96.000	ENSACIG00000024504	polr3a	97	96.000	Amphilophus_citrinellus
ENSCSEG00000016653	polr3a	100	92.518	ENSAOCG00000003949	-	100	92.518	Amphiprion_ocellaris
ENSCSEG00000016653	polr3a	100	95.899	ENSAOCG00000002071	polr3a	100	95.899	Amphiprion_ocellaris
ENSCSEG00000016653	polr3a	100	95.899	ENSAPEG00000013351	polr3a	100	95.899	Amphiprion_percula
ENSCSEG00000016653	polr3a	100	95.755	ENSAPEG00000001966	-	100	95.755	Amphiprion_percula
ENSCSEG00000016653	polr3a	100	96.259	ENSATEG00000023277	polr3a	100	96.259	Anabas_testudineus
ENSCSEG00000016653	polr3a	99	90.618	ENSAPLG00000015878	POLR3A	99	90.618	Anas_platyrhynchos
ENSCSEG00000016653	polr3a	93	89.076	ENSACAG00000007985	POLR3A	99	89.076	Anolis_carolinensis
ENSCSEG00000016653	polr3a	100	87.275	ENSANAG00000028922	POLR3A	96	93.631	Aotus_nancymaae
ENSCSEG00000016653	polr3a	100	95.683	ENSACLG00000005914	polr3a	100	95.683	Astatotilapia_calliptera
ENSCSEG00000016653	polr3a	99	89.769	ENSAMXG00000018852	polr3a	99	89.769	Astyanax_mexicanus
ENSCSEG00000016653	polr3a	100	89.856	ENSBTAG00000013259	POLR3A	100	89.856	Bos_taurus
ENSCSEG00000016653	polr3a	99	56.228	WBGene00004411	rpc-1	99	56.228	Caenorhabditis_elegans
ENSCSEG00000016653	polr3a	100	89.784	ENSCJAG00000001015	POLR3A	100	89.784	Callithrix_jacchus
ENSCSEG00000016653	polr3a	100	89.928	ENSCAFG00000015546	POLR3A	100	89.928	Canis_familiaris
ENSCSEG00000016653	polr3a	100	89.928	ENSCAFG00020014711	POLR3A	100	89.928	Canis_lupus_dingo
ENSCSEG00000016653	polr3a	100	89.640	ENSCHIG00000000352	POLR3A	100	89.640	Capra_hircus
ENSCSEG00000016653	polr3a	100	89.424	ENSTSYG00000006671	POLR3A	100	89.424	Carlito_syrichta
ENSCSEG00000016653	polr3a	99	89.818	ENSCAPG00000016031	POLR3A	100	89.818	Cavia_aperea
ENSCSEG00000016653	polr3a	100	89.856	ENSCPOG00000022387	POLR3A	100	89.856	Cavia_porcellus
ENSCSEG00000016653	polr3a	100	88.705	ENSCCAG00000032995	POLR3A	96	93.038	Cebus_capucinus
ENSCSEG00000016653	polr3a	100	89.928	ENSCATG00000035842	POLR3A	98	93.038	Cercocebus_atys
ENSCSEG00000016653	polr3a	100	90.000	ENSCLAG00000009629	POLR3A	100	90.000	Chinchilla_lanigera
ENSCSEG00000016653	polr3a	100	89.928	ENSCSAG00000009292	POLR3A	100	89.928	Chlorocebus_sabaeus
ENSCSEG00000016653	polr3a	85	75.591	ENSCHOG00000008368	POLR3A	100	75.591	Choloepus_hoffmanni
ENSCSEG00000016653	polr3a	99	90.569	ENSCPBG00000002079	POLR3A	99	90.569	Chrysemys_picta_bellii
ENSCSEG00000016653	polr3a	99	68.732	ENSCSAVG00000009925	-	99	68.732	Ciona_savignyi
ENSCSEG00000016653	polr3a	86	85.341	ENSCANG00000041071	POLR3A	98	92.405	Colobus_angolensis_palliatus
ENSCSEG00000016653	polr3a	78	90.850	ENSCGRG00001015599	-	92	90.850	Cricetulus_griseus_chok1gshd
ENSCSEG00000016653	polr3a	88	89.052	ENSCGRG00000001019	Polr3a	100	89.052	Cricetulus_griseus_crigri
ENSCSEG00000016653	polr3a	100	95.468	ENSCVAG00000023049	polr3a	100	95.468	Cyprinodon_variegatus
ENSCSEG00000016653	polr3a	99	91.715	ENSDARG00000102569	polr3a	99	91.715	Danio_rerio
ENSCSEG00000016653	polr3a	100	89.065	ENSDNOG00000010194	POLR3A	100	89.065	Dasypus_novemcinctus
ENSCSEG00000016653	polr3a	100	89.856	ENSDORG00000000184	Polr3a	100	89.856	Dipodomys_ordii
ENSCSEG00000016653	polr3a	99	57.164	FBgn0030687	CG17209	99	57.164	Drosophila_melanogaster
ENSCSEG00000016653	polr3a	88	89.879	ENSETEG00000007477	POLR3A	89	89.879	Echinops_telfairi
ENSCSEG00000016653	polr3a	59	76.112	ENSEBUG00000013761	polr3a	98	76.112	Eptatretus_burgeri
ENSCSEG00000016653	polr3a	100	89.784	ENSEASG00005023053	POLR3A	100	89.784	Equus_asinus_asinus
ENSCSEG00000016653	polr3a	97	89.940	ENSECAG00000019416	POLR3A	100	89.564	Equus_caballus
ENSCSEG00000016653	polr3a	96	85.384	ENSEEUG00000001774	POLR3A	100	85.384	Erinaceus_europaeus
ENSCSEG00000016653	polr3a	100	90.739	ENSELUG00000014016	polr3a	100	90.739	Esox_lucius
ENSCSEG00000016653	polr3a	100	90.000	ENSFCAG00000000843	POLR3A	100	90.000	Felis_catus
ENSCSEG00000016653	polr3a	100	90.295	ENSFALG00000006913	POLR3A	100	90.295	Ficedula_albicollis
ENSCSEG00000016653	polr3a	100	90.000	ENSFDAG00000007813	POLR3A	100	90.000	Fukomys_damarensis
ENSCSEG00000016653	polr3a	95	95.658	ENSFHEG00000011922	polr3a	99	95.658	Fundulus_heteroclitus
ENSCSEG00000016653	polr3a	100	87.969	ENSGMOG00000000291	polr3a	99	87.969	Gadus_morhua
ENSCSEG00000016653	polr3a	100	90.647	ENSGALG00000004947	POLR3A	100	90.647	Gallus_gallus
ENSCSEG00000016653	polr3a	100	95.612	ENSGAFG00000005112	polr3a	100	95.612	Gambusia_affinis
ENSCSEG00000016653	polr3a	100	94.892	ENSGACG00000002304	polr3a	100	94.892	Gasterosteus_aculeatus
ENSCSEG00000016653	polr3a	95	90.386	ENSGAGG00000010386	POLR3A	98	90.386	Gopherus_agassizii
ENSCSEG00000016653	polr3a	99	88.801	ENSGGOG00000027729	POLR3A	98	93.038	Gorilla_gorilla
ENSCSEG00000016653	polr3a	100	95.683	ENSHBUG00000018098	polr3a	100	95.683	Haplochromis_burtoni
ENSCSEG00000016653	polr3a	100	90.072	ENSHGLG00000017899	POLR3A	100	90.072	Heterocephalus_glaber_female
ENSCSEG00000016653	polr3a	100	90.072	ENSHGLG00100008483	POLR3A	100	90.072	Heterocephalus_glaber_male
ENSCSEG00000016653	polr3a	100	94.604	ENSHCOG00000001075	polr3a	100	94.604	Hippocampus_comes
ENSCSEG00000016653	polr3a	100	90.144	ENSSTOG00000012983	POLR3A	100	90.144	Ictidomys_tridecemlineatus
ENSCSEG00000016653	polr3a	100	94.748	ENSKMAG00000015290	polr3a	100	94.748	Kryptolebias_marmoratus
ENSCSEG00000016653	polr3a	99	94.312	ENSLBEG00000017214	polr3a	99	94.312	Labrus_bergylta
ENSCSEG00000016653	polr3a	97	88.401	ENSLACG00000018557	POLR3A	99	88.401	Latimeria_chalumnae
ENSCSEG00000016653	polr3a	100	92.462	ENSLOCG00000004942	polr3a	100	92.462	Lepisosteus_oculatus
ENSCSEG00000016653	polr3a	100	88.497	ENSLAFG00000016719	POLR3A	100	88.497	Loxodonta_africana
ENSCSEG00000016653	polr3a	100	89.856	ENSMFAG00000032218	POLR3A	100	89.856	Macaca_fascicularis
ENSCSEG00000016653	polr3a	100	89.856	ENSMMUG00000005514	POLR3A	98	93.038	Macaca_mulatta
ENSCSEG00000016653	polr3a	99	83.417	ENSMNEG00000035163	POLR3A	99	89.413	Macaca_nemestrina
ENSCSEG00000016653	polr3a	100	86.115	ENSMLEG00000030014	POLR3A	98	93.038	Mandrillus_leucophaeus
ENSCSEG00000016653	polr3a	100	96.331	ENSMAMG00000017497	polr3a	100	96.331	Mastacembelus_armatus
ENSCSEG00000016653	polr3a	100	95.683	ENSMZEG00005000576	polr3a	100	95.683	Maylandia_zebra
ENSCSEG00000016653	polr3a	100	73.224	ENSMGAG00000005713	-	100	73.224	Meleagris_gallopavo
ENSCSEG00000016653	polr3a	100	87.842	ENSMAUG00000016247	Polr3a	100	87.842	Mesocricetus_auratus
ENSCSEG00000016653	polr3a	100	89.928	ENSMICG00000005937	POLR3A	100	90.877	Microcebus_murinus
ENSCSEG00000016653	polr3a	100	90.000	ENSMOCG00000012185	Polr3a	100	90.000	Microtus_ochrogaster
ENSCSEG00000016653	polr3a	100	94.604	ENSMMOG00000013822	polr3a	100	94.604	Mola_mola
ENSCSEG00000016653	polr3a	100	90.000	ENSMODG00000001036	POLR3A	100	90.000	Monodelphis_domestica
ENSCSEG00000016653	polr3a	100	96.259	ENSMALG00000001249	polr3a	100	96.259	Monopterus_albus
ENSCSEG00000016653	polr3a	100	89.928	MGP_CAROLIEiJ_G0019016	Polr3a	100	89.928	Mus_caroli
ENSCSEG00000016653	polr3a	100	90.000	ENSMUSG00000025280	Polr3a	100	90.000	Mus_musculus
ENSCSEG00000016653	polr3a	100	89.928	MGP_PahariEiJ_G0030029	Polr3a	100	89.928	Mus_pahari
ENSCSEG00000016653	polr3a	100	87.338	MGP_SPRETEiJ_G0019894	Polr3a	97	96.040	Mus_spretus
ENSCSEG00000016653	polr3a	100	89.230	ENSMPUG00000003790	POLR3A	100	89.230	Mustela_putorius_furo
ENSCSEG00000016653	polr3a	100	88.705	ENSMLUG00000011522	POLR3A	100	88.705	Myotis_lucifugus
ENSCSEG00000016653	polr3a	100	88.777	ENSNGAG00000015863	Polr3a	100	88.777	Nannospalax_galili
ENSCSEG00000016653	polr3a	100	93.597	ENSNBRG00000014262	polr3a	100	93.597	Neolamprologus_brichardi
ENSCSEG00000016653	polr3a	88	83.233	ENSNLEG00000010501	POLR3A	92	83.233	Nomascus_leucogenys
ENSCSEG00000016653	polr3a	99	77.309	ENSMEUG00000012446	POLR3A	100	77.309	Notamacropus_eugenii
ENSCSEG00000016653	polr3a	100	85.252	ENSOPRG00000001880	-	100	85.252	Ochotona_princeps
ENSCSEG00000016653	polr3a	100	89.424	ENSODEG00000015146	POLR3A	100	89.424	Octodon_degus
ENSCSEG00000016653	polr3a	100	95.755	ENSONIG00000016129	polr3a	100	95.755	Oreochromis_niloticus
ENSCSEG00000016653	polr3a	98	89.408	ENSOANG00000007013	POLR3A	100	89.408	Ornithorhynchus_anatinus
ENSCSEG00000016653	polr3a	100	89.712	ENSOCUG00000012450	POLR3A	100	89.712	Oryctolagus_cuniculus
ENSCSEG00000016653	polr3a	100	95.540	ENSORLG00000008958	polr3a	100	95.540	Oryzias_latipes
ENSCSEG00000016653	polr3a	100	93.165	ENSORLG00020007525	polr3a	98	95.753	Oryzias_latipes_hni
ENSCSEG00000016653	polr3a	100	95.540	ENSORLG00015006633	polr3a	100	95.540	Oryzias_latipes_hsok
ENSCSEG00000016653	polr3a	100	94.892	ENSOMEG00000012865	polr3a	100	94.892	Oryzias_melastigma
ENSCSEG00000016653	polr3a	100	89.856	ENSOGAG00000010995	POLR3A	100	89.856	Otolemur_garnettii
ENSCSEG00000016653	polr3a	100	89.511	ENSOARG00000009656	POLR3A	100	89.511	Ovis_aries
ENSCSEG00000016653	polr3a	100	90.000	ENSPPRG00000002128	POLR3A	100	90.000	Panthera_pardus
ENSCSEG00000016653	polr3a	100	90.000	ENSPTIG00000020916	POLR3A	100	90.000	Panthera_tigris_altaica
ENSCSEG00000016653	polr3a	100	90.000	ENSPTRG00000002664	POLR3A	98	93.038	Pan_troglodytes
ENSCSEG00000016653	polr3a	100	89.856	ENSPANG00000022508	POLR3A	98	93.038	Papio_anubis
ENSCSEG00000016653	polr3a	100	92.662	ENSPKIG00000008140	polr3a	100	92.662	Paramormyrops_kingsleyae
ENSCSEG00000016653	polr3a	98	90.504	ENSPSIG00000002092	POLR3A	100	90.504	Pelodiscus_sinensis
ENSCSEG00000016653	polr3a	100	89.712	ENSPEMG00000006768	Polr3a	100	89.712	Peromyscus_maniculatus_bairdii
ENSCSEG00000016653	polr3a	100	89.856	ENSPCIG00000015842	POLR3A	100	89.856	Phascolarctos_cinereus
ENSCSEG00000016653	polr3a	54	96.779	ENSPFOG00000006458	polr3a	100	96.779	Poecilia_formosa
ENSCSEG00000016653	polr3a	100	95.971	ENSPLAG00000000997	polr3a	100	95.971	Poecilia_latipinna
ENSCSEG00000016653	polr3a	100	95.899	ENSPMEG00000006821	polr3a	100	95.899	Poecilia_mexicana
ENSCSEG00000016653	polr3a	100	95.755	ENSPREG00000002385	polr3a	100	95.755	Poecilia_reticulata
ENSCSEG00000016653	polr3a	93	89.698	ENSPPYG00000002305	POLR3A	99	89.698	Pongo_abelii
ENSCSEG00000016653	polr3a	84	78.244	ENSPCAG00000005690	POLR3A	87	78.244	Procavia_capensis
ENSCSEG00000016653	polr3a	100	89.784	ENSPCOG00000028311	POLR3A	100	89.784	Propithecus_coquereli
ENSCSEG00000016653	polr3a	100	88.417	ENSPVAG00000015553	POLR3A	100	88.417	Pteropus_vampyrus
ENSCSEG00000016653	polr3a	100	95.612	ENSPNYG00000020987	polr3a	100	95.612	Pundamilia_nyererei
ENSCSEG00000016653	polr3a	99	88.617	ENSPNAG00000006629	polr3a	99	88.617	Pygocentrus_nattereri
ENSCSEG00000016653	polr3a	100	89.856	ENSRNOG00000010008	Polr3a	100	89.856	Rattus_norvegicus
ENSCSEG00000016653	polr3a	100	86.187	ENSRBIG00000034967	POLR3A	98	93.038	Rhinopithecus_bieti
ENSCSEG00000016653	polr3a	100	89.856	ENSRROG00000025527	POLR3A	98	93.038	Rhinopithecus_roxellana
ENSCSEG00000016653	polr3a	98	50.173	YOR116C	RPO31	98	50.173	Saccharomyces_cerevisiae
ENSCSEG00000016653	polr3a	100	89.856	ENSSBOG00000022199	POLR3A	100	89.856	Saimiri_boliviensis_boliviensis
ENSCSEG00000016653	polr3a	100	89.784	ENSSHAG00000007588	POLR3A	94	89.784	Sarcophilus_harrisii
ENSCSEG00000016653	polr3a	100	93.309	ENSSFOG00015014357	polr3a	100	93.309	Scleropages_formosus
ENSCSEG00000016653	polr3a	100	96.475	ENSSMAG00000001780	polr3a	100	96.475	Scophthalmus_maximus
ENSCSEG00000016653	polr3a	100	96.835	ENSSDUG00000019840	polr3a	100	96.835	Seriola_dumerili
ENSCSEG00000016653	polr3a	100	96.691	ENSSLDG00000023908	polr3a	100	96.691	Seriola_lalandi_dorsalis
ENSCSEG00000016653	polr3a	69	89.342	ENSSARG00000009916	POLR3A	89	89.342	Sorex_araneus
ENSCSEG00000016653	polr3a	100	88.489	ENSSPUG00000013209	POLR3A	100	88.489	Sphenodon_punctatus
ENSCSEG00000016653	polr3a	100	96.043	ENSSPAG00000017712	polr3a	100	96.043	Stegastes_partitus
ENSCSEG00000016653	polr3a	100	89.712	ENSSSCG00000010327	POLR3A	100	89.712	Sus_scrofa
ENSCSEG00000016653	polr3a	100	90.216	ENSTGUG00000006423	-	100	90.216	Taeniopygia_guttata
ENSCSEG00000016653	polr3a	100	94.748	ENSTRUG00000013488	polr3a	100	94.748	Takifugu_rubripes
ENSCSEG00000016653	polr3a	100	94.971	ENSTNIG00000013151	polr3a	100	94.971	Tetraodon_nigroviridis
ENSCSEG00000016653	polr3a	71	91.489	ENSTBEG00000015288	POLR3A	75	91.489	Tupaia_belangeri
ENSCSEG00000016653	polr3a	100	83.741	ENSTTRG00000007817	POLR3A	100	83.741	Tursiops_truncatus
ENSCSEG00000016653	polr3a	100	87.554	ENSUAMG00000011283	POLR3A	100	87.554	Ursus_americanus
ENSCSEG00000016653	polr3a	100	89.856	ENSUMAG00000013913	POLR3A	100	89.856	Ursus_maritimus
ENSCSEG00000016653	polr3a	99	81.964	ENSVPAG00000003285	POLR3A	100	81.964	Vicugna_pacos
ENSCSEG00000016653	polr3a	100	89.928	ENSVVUG00000025523	POLR3A	100	89.928	Vulpes_vulpes
ENSCSEG00000016653	polr3a	86	90.393	ENSXETG00000018101	polr3a	100	90.393	Xenopus_tropicalis
ENSCSEG00000016653	polr3a	100	95.899	ENSXMAG00000015213	polr3a	100	95.899	Xiphophorus_maculatus