EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000016683 (Gene tree)
Gene ID: 103394957
Gene Symbol: rexo1
Alias: fb77b11|si:dkey-45m5.5|wu:fb77b11
Full Name: RNA exonuclease 1 homolog
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 12196 bases
Position: chr2:5239899-5252094
Accession: 103394957
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000026132	RNase_T	PF00929.24	8.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000026473	-	5708	XM_008332462	ENSCSEP00000026132	1264 (aa)	XP_008330684	UPI000497E7CD

Gene Model

Click here to download ENSCSEG00000016683's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000016683's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000016683	rexo1	100	55.131	ENSAMXG00000016463	rexo1	100	55.279	Astyanax_mexicanus
ENSCSEG00000016683	rexo1	100	55.622	ENSELUG00000014078	rexo1	100	56.366	Esox_lucius
ENSCSEG00000016683	rexo1	100	53.307	ENSGMOG00000011119	rexo1	96	62.812	Gadus_morhua
ENSCSEG00000016683	rexo1	100	50.917	ENSLOCG00000001203	rexo1	100	50.765	Lepisosteus_oculatus
ENSCSEG00000016683	rexo1	100	70.173	ENSMMOG00000006931	rexo1	100	70.251	Mola_mola
ENSCSEG00000016683	rexo1	100	55.412	ENSPNAG00000025432	rexo1	100	55.835	Pygocentrus_nattereri
ENSCSEG00000016683	rexo1	99	53.765	ENSSFOG00015001227	rexo1	99	53.429	Scleropages_formosus