EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000016803 (Gene tree)
Gene ID: 103398841
Gene Symbol: rab18b
Alias: zgc:92523
Full Name: ras-related protein Rab-18-B-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 35447 bases
Position: chrKI934288.1:74700-110146
Accession: 103398841
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000026311	MMR_HSR1	PF01926.23	2.9e-07	1	1
ENSCSEP00000026330	MMR_HSR1	PF01926.23	4.6e-07	1	1
ENSCSEP00000026320	MMR_HSR1	PF01926.23	5.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000026657	-	4613	-	ENSCSEP00000026311	212 (aa)	-	-
ENSCSET00000026679	-	951	XM_008337584	ENSCSEP00000026330	196 (aa)	XP_008335806	-
ENSCSET00000026667	-	1047	-	ENSCSEP00000026320	228 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000016803's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000016803's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000016803	rab18b	85	36.471	ENSCSEG00000005479	rabl2	85	35.204
ENSCSEG00000016803	rab18b	83	36.527	ENSCSEG00000002970	RAB7A	75	36.527
ENSCSEG00000016803	rab18b	83	50.610	ENSCSEG00000007292	rab30	80	50.610
ENSCSEG00000016803	rab18b	90	30.939	ENSCSEG00000014284	dnajc27	64	30.939
ENSCSEG00000016803	rab18b	83	49.390	ENSCSEG00000013400	rab35b	87	46.893
ENSCSEG00000016803	rab18b	99	41.538	ENSCSEG00000017026	rab25a	92	39.631
ENSCSEG00000016803	rab18b	84	44.848	ENSCSEG00000017024	rab5c	75	44.848
ENSCSEG00000016803	rab18b	86	44.706	ENSCSEG00000000205	RAB15	81	44.706
ENSCSEG00000016803	rab18b	83	48.171	ENSCSEG00000016933	rab12	67	48.171
ENSCSEG00000016803	rab18b	76	41.333	ENSCSEG00000020348	rab33ba	63	41.333
ENSCSEG00000016803	rab18b	82	49.383	ENSCSEG00000014416	zgc:171927	76	49.383
ENSCSEG00000016803	rab18b	87	45.614	ENSCSEG00000012149	rab11bb	78	45.614
ENSCSEG00000016803	rab18b	83	40.606	ENSCSEG00000010582	rab42a	76	40.606
ENSCSEG00000016803	rab18b	87	39.535	ENSCSEG00000019722	RAB39B	81	39.535
ENSCSEG00000016803	rab18b	87	46.199	ENSCSEG00000007121	rab11ba	66	46.199
ENSCSEG00000016803	rab18b	93	33.690	ENSCSEG00000012961	rab34a	71	33.690
ENSCSEG00000016803	rab18b	74	46.259	ENSCSEG00000016284	rab33a	53	46.259
ENSCSEG00000016803	rab18b	83	37.952	ENSCSEG00000014467	rab9b	75	37.952
ENSCSEG00000016803	rab18b	94	47.368	ENSCSEG00000017211	rab2a	88	47.368
ENSCSEG00000016803	rab18b	79	33.540	ENSCSEG00000011820	rras	94	33.155
ENSCSEG00000016803	rab18b	87	39.766	ENSCSEG00000004941	rab41	79	39.766
ENSCSEG00000016803	rab18b	82	45.679	ENSCSEG00000011996	rab11al	85	44.578
ENSCSEG00000016803	rab18b	83	47.561	ENSCSEG00000016498	rab14	76	47.561
ENSCSEG00000016803	rab18b	83	47.561	ENSCSEG00000002358	rab13	82	47.561
ENSCSEG00000016803	rab18b	99	82.051	ENSCSEG00000011816	rab18a	96	82.051
ENSCSEG00000016803	rab18b	78	35.714	ENSCSEG00000010565	rab23	75	35.714
ENSCSEG00000016803	rab18b	90	35.938	ENSCSEG00000006243	zgc:101559	80	35.938
ENSCSEG00000016803	rab18b	90	38.764	ENSCSEG00000003122	rab6ba	85	38.764
ENSCSEG00000016803	rab18b	85	33.133	ENSCSEG00000007927	hrasb	87	33.133
ENSCSEG00000016803	rab18b	82	48.765	ENSCSEG00000018732	rab1ba	83	47.904
ENSCSEG00000016803	rab18b	94	43.085	ENSCSEG00000019797	rab22a	94	43.085
ENSCSEG00000016803	rab18b	87	45.029	ENSCSEG00000007383	rab11a	79	45.029
ENSCSEG00000016803	rab18b	84	31.395	ENSCSEG00000003537	rhebl1	90	31.395
ENSCSEG00000016803	rab18b	84	42.857	ENSCSEG00000019183	si:dkey-34d22.5	76	42.857
ENSCSEG00000016803	rab18b	82	46.914	ENSCSEG00000011982	rab25b	74	46.914
ENSCSEG00000016803	rab18b	86	35.882	ENSCSEG00000018987	si:ch73-116o1.2	81	35.882
ENSCSEG00000016803	rab18b	83	36.527	ENSCSEG00000005357	-	81	36.527
ENSCSEG00000016803	rab18b	82	34.146	ENSCSEG00000015770	si:cabz01085950.1	81	34.146
ENSCSEG00000016803	rab18b	84	37.500	ENSCSEG00000010116	rab9a	79	37.500
ENSCSEG00000016803	rab18b	87	45.614	ENSCSEG00000007239	-	78	45.614
ENSCSEG00000016803	rab18b	73	34.228	ENSCSEG00000016611	rheb	78	34.228
ENSCSEG00000016803	rab18b	87	39.766	ENSCSEG00000016556	rab6bb	80	39.766
ENSCSEG00000016803	rab18b	85	49.102	ENSCSEG00000020977	-	81	49.102
ENSCSEG00000016803	rab18b	89	41.573	ENSCSEG00000010402	-	81	41.573
ENSCSEG00000016803	rab18b	54	31.429	ENSCSEG00000015746	-	80	32.759
ENSCSEG00000016803	rab18b	87	41.860	ENSCSEG00000017861	-	81	41.860
ENSCSEG00000016803	rab18b	85	47.024	ENSCSEG00000003768	rab15	70	47.024
ENSCSEG00000016803	rab18b	51	59.596	ENSCSEG00000009988	si:dkey-16l2.16	76	59.596
ENSCSEG00000016803	rab18b	76	36.000	ENSCSEG00000009987	rras2	83	36.095
ENSCSEG00000016803	rab18b	75	43.791	ENSCSEG00000014479	-	63	44.079
ENSCSEG00000016803	rab18b	84	33.537	ENSCSEG00000005737	kras	87	33.537
ENSCSEG00000016803	rab18b	89	30.726	ENSCSEG00000018133	rab34b	71	30.726

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000016803	rab18b	98	85.417	ENSG00000099246	RAB18	95	84.615	Homo_sapiens
ENSCSEG00000016803	rab18b	99	93.846	ENSAPOG00000019881	rab18b	95	94.330	Acanthochromis_polyacanthus
ENSCSEG00000016803	rab18b	98	73.874	ENSAMEG00000015990	RAB18	95	73.333	Ailuropoda_melanoleuca
ENSCSEG00000016803	rab18b	99	93.846	ENSACIG00000008102	rab18b	95	94.330	Amphilophus_citrinellus
ENSCSEG00000016803	rab18b	99	93.846	ENSAOCG00000013479	rab18b	95	94.330	Amphiprion_ocellaris
ENSCSEG00000016803	rab18b	99	94.359	ENSAPEG00000022923	rab18b	95	94.845	Amphiprion_percula
ENSCSEG00000016803	rab18b	99	92.821	ENSATEG00000002952	rab18b	99	89.706	Anabas_testudineus
ENSCSEG00000016803	rab18b	98	85.417	ENSANAG00000035856	RAB18	95	84.615	Aotus_nancymaae
ENSCSEG00000016803	rab18b	99	94.845	ENSACLG00000015289	rab18b	95	94.845	Astatotilapia_calliptera
ENSCSEG00000016803	rab18b	98	88.542	ENSAMXG00000042073	rab18b	94	88.542	Astyanax_mexicanus
ENSCSEG00000016803	rab18b	99	82.564	ENSBTAG00000050873	-	95	82.564	Bos_taurus
ENSCSEG00000016803	rab18b	98	85.417	ENSBTAG00000009871	RAB18	83	84.615	Bos_taurus
ENSCSEG00000016803	rab18b	98	85.417	ENSCJAG00000045749	RAB18	95	84.615	Callithrix_jacchus
ENSCSEG00000016803	rab18b	98	85.417	ENSCAFG00020003253	RAB18	95	84.615	Canis_lupus_dingo
ENSCSEG00000016803	rab18b	98	85.417	ENSCHIG00000008749	RAB18	95	84.615	Capra_hircus
ENSCSEG00000016803	rab18b	98	84.896	ENSTSYG00000013092	RAB18	95	84.103	Carlito_syrichta
ENSCSEG00000016803	rab18b	99	84.615	ENSCPOG00000032827	RAB18	95	84.615	Cavia_porcellus
ENSCSEG00000016803	rab18b	98	85.417	ENSCCAG00000006762	RAB18	95	84.615	Cebus_capucinus
ENSCSEG00000016803	rab18b	99	84.615	ENSCATG00000009672	RAB18	95	84.615	Cercocebus_atys
ENSCSEG00000016803	rab18b	98	85.417	ENSCSAG00000011749	RAB18	95	84.615	Chlorocebus_sabaeus
ENSCSEG00000016803	rab18b	98	85.417	ENSCANG00000035397	RAB18	95	84.615	Colobus_angolensis_palliatus
ENSCSEG00000016803	rab18b	99	84.615	ENSCGRG00001017519	Rab18	95	84.615	Cricetulus_griseus_chok1gshd
ENSCSEG00000016803	rab18b	99	84.615	ENSCGRG00000017201	Rab18	95	84.615	Cricetulus_griseus_crigri
ENSCSEG00000016803	rab18b	99	87.629	ENSDARG00000098344	rab18b	95	87.629	Danio_rerio
ENSCSEG00000016803	rab18b	58	87.611	ENSDNOG00000038845	-	75	87.611	Dasypus_novemcinctus
ENSCSEG00000016803	rab18b	98	85.417	ENSDNOG00000047713	RAB18	95	84.615	Dasypus_novemcinctus
ENSCSEG00000016803	rab18b	89	81.609	ENSDORG00000029360	-	99	69.626	Dipodomys_ordii
ENSCSEG00000016803	rab18b	99	84.615	ENSDORG00000028596	-	95	84.615	Dipodomys_ordii
ENSCSEG00000016803	rab18b	98	85.417	ENSEASG00005007164	RAB18	95	84.615	Equus_asinus_asinus
ENSCSEG00000016803	rab18b	98	85.417	ENSECAG00000017521	RAB18	83	84.615	Equus_caballus
ENSCSEG00000016803	rab18b	99	84.184	ENSELUG00000016450	rab18b	95	84.615	Esox_lucius
ENSCSEG00000016803	rab18b	98	85.417	ENSFCAG00000027161	RAB18	95	84.615	Felis_catus
ENSCSEG00000016803	rab18b	98	84.896	ENSFALG00000007160	RAB18	94	84.103	Ficedula_albicollis
ENSCSEG00000016803	rab18b	99	90.769	ENSFHEG00000020035	rab18b	95	90.769	Fundulus_heteroclitus
ENSCSEG00000016803	rab18b	99	84.615	ENSGMOG00000016608	rab18b	95	84.615	Gadus_morhua
ENSCSEG00000016803	rab18b	98	85.417	ENSGALG00000007435	RAB18	95	84.615	Gallus_gallus
ENSCSEG00000016803	rab18b	99	92.308	ENSGAFG00000008560	rab18b	99	89.216	Gambusia_affinis
ENSCSEG00000016803	rab18b	98	91.667	ENSGACG00000016395	rab18b	94	91.667	Gasterosteus_aculeatus
ENSCSEG00000016803	rab18b	98	85.417	ENSGGOG00000008086	RAB18	95	84.615	Gorilla_gorilla
ENSCSEG00000016803	rab18b	99	94.845	ENSHBUG00000003696	rab18b	95	94.845	Haplochromis_burtoni
ENSCSEG00000016803	rab18b	99	84.615	ENSHGLG00000004365	RAB18	95	84.615	Heterocephalus_glaber_female
ENSCSEG00000016803	rab18b	92	77.348	ENSHGLG00000007301	-	88	77.348	Heterocephalus_glaber_female
ENSCSEG00000016803	rab18b	99	84.615	ENSHGLG00100013089	-	95	84.615	Heterocephalus_glaber_male
ENSCSEG00000016803	rab18b	92	77.348	ENSHGLG00100009117	-	88	77.348	Heterocephalus_glaber_male
ENSCSEG00000016803	rab18b	99	93.846	ENSHCOG00000002217	rab18b	95	93.846	Hippocampus_comes
ENSCSEG00000016803	rab18b	97	85.864	ENSIPUG00000010859	rab18b	93	85.864	Ictalurus_punctatus
ENSCSEG00000016803	rab18b	99	84.615	ENSSTOG00000014560	-	95	84.615	Ictidomys_tridecemlineatus
ENSCSEG00000016803	rab18b	99	90.769	ENSKMAG00000007364	rab18b	95	90.769	Kryptolebias_marmoratus
ENSCSEG00000016803	rab18b	99	93.333	ENSLBEG00000019428	rab18b	95	93.333	Labrus_bergylta
ENSCSEG00000016803	rab18b	96	77.128	ENSLACG00000011256	rab18b	92	77.128	Latimeria_chalumnae
ENSCSEG00000016803	rab18b	98	85.417	ENSLAFG00000015582	RAB18	95	84.615	Loxodonta_africana
ENSCSEG00000016803	rab18b	98	85.417	ENSMFAG00000006430	RAB18	95	84.615	Macaca_fascicularis
ENSCSEG00000016803	rab18b	99	84.615	ENSMMUG00000046971	RAB18	70	84.615	Macaca_mulatta
ENSCSEG00000016803	rab18b	98	85.417	ENSMNEG00000038180	RAB18	95	84.615	Macaca_nemestrina
ENSCSEG00000016803	rab18b	98	85.417	ENSMLEG00000033595	RAB18	95	84.615	Mandrillus_leucophaeus
ENSCSEG00000016803	rab18b	98	92.708	ENSMAMG00000018445	rab18b	100	87.805	Mastacembelus_armatus
ENSCSEG00000016803	rab18b	99	94.845	ENSMZEG00005008244	rab18b	95	94.845	Maylandia_zebra
ENSCSEG00000016803	rab18b	98	78.125	ENSMAUG00000020698	-	97	80.220	Mesocricetus_auratus
ENSCSEG00000016803	rab18b	98	85.417	ENSMICG00000017280	RAB18	95	84.615	Microcebus_murinus
ENSCSEG00000016803	rab18b	99	84.615	ENSMOCG00000013044	Rab18	95	84.615	Microtus_ochrogaster
ENSCSEG00000016803	rab18b	95	77.273	ENSMMOG00000017849	rab18b	95	76.214	Mola_mola
ENSCSEG00000016803	rab18b	99	77.949	ENSMODG00000024936	-	100	75.610	Monodelphis_domestica
ENSCSEG00000016803	rab18b	99	84.615	ENSMODG00000008253	RAB18	95	84.615	Monodelphis_domestica
ENSCSEG00000016803	rab18b	99	91.282	ENSMALG00000005069	rab18b	95	91.282	Monopterus_albus
ENSCSEG00000016803	rab18b	99	85.128	MGP_CAROLIEiJ_G0021978	Rab18	95	85.128	Mus_caroli
ENSCSEG00000016803	rab18b	99	85.128	ENSMUSG00000073639	Rab18	95	85.128	Mus_musculus
ENSCSEG00000016803	rab18b	99	85.128	MGP_PahariEiJ_G0018716	Rab18	95	85.128	Mus_pahari
ENSCSEG00000016803	rab18b	99	85.128	MGP_SPRETEiJ_G0022894	Rab18	95	85.128	Mus_spretus
ENSCSEG00000016803	rab18b	98	85.417	ENSMPUG00000010592	RAB18	95	84.615	Mustela_putorius_furo
ENSCSEG00000016803	rab18b	98	73.874	ENSMLUG00000027295	RAB18	95	73.333	Myotis_lucifugus
ENSCSEG00000016803	rab18b	99	84.615	ENSNGAG00000001465	Rab18	95	84.615	Nannospalax_galili
ENSCSEG00000016803	rab18b	99	94.845	ENSNBRG00000008137	rab18b	95	94.845	Neolamprologus_brichardi
ENSCSEG00000016803	rab18b	98	85.417	ENSNLEG00000016970	RAB18	95	84.615	Nomascus_leucogenys
ENSCSEG00000016803	rab18b	99	84.615	ENSODEG00000004150	-	95	84.615	Octodon_degus
ENSCSEG00000016803	rab18b	99	94.845	ENSONIG00000018673	rab18b	95	94.845	Oreochromis_niloticus
ENSCSEG00000016803	rab18b	95	87.701	ENSOANG00000021391	RAB18	95	85.128	Ornithorhynchus_anatinus
ENSCSEG00000016803	rab18b	99	84.103	ENSOCUG00000022307	RAB18	99	81.281	Oryctolagus_cuniculus
ENSCSEG00000016803	rab18b	99	91.282	ENSORLG00000009609	rab18b	95	91.282	Oryzias_latipes
ENSCSEG00000016803	rab18b	99	91.282	ENSORLG00020011590	rab18b	95	91.282	Oryzias_latipes_hni
ENSCSEG00000016803	rab18b	99	91.282	ENSORLG00015007182	rab18b	95	91.282	Oryzias_latipes_hsok
ENSCSEG00000016803	rab18b	99	91.282	ENSOMEG00000007546	rab18b	95	91.282	Oryzias_melastigma
ENSCSEG00000016803	rab18b	98	85.417	ENSOGAG00000028015	RAB18	95	84.615	Otolemur_garnettii
ENSCSEG00000016803	rab18b	98	85.417	ENSOARG00000016208	RAB18	95	84.615	Ovis_aries
ENSCSEG00000016803	rab18b	98	85.417	ENSPPAG00000041625	RAB18	95	84.615	Pan_paniscus
ENSCSEG00000016803	rab18b	98	85.417	ENSPPRG00000010314	RAB18	95	84.615	Panthera_pardus
ENSCSEG00000016803	rab18b	98	85.417	ENSPTIG00000011667	RAB18	95	84.615	Panthera_tigris_altaica
ENSCSEG00000016803	rab18b	98	85.417	ENSPTRG00000002384	RAB18	95	84.615	Pan_troglodytes
ENSCSEG00000016803	rab18b	98	85.417	ENSPANG00000023005	RAB18	95	84.615	Papio_anubis
ENSCSEG00000016803	rab18b	91	89.385	ENSPMAG00000005322	rab18b	99	80.000	Petromyzon_marinus
ENSCSEG00000016803	rab18b	99	85.128	ENSPCIG00000028705	-	88	81.951	Phascolarctos_cinereus
ENSCSEG00000016803	rab18b	99	92.821	ENSPFOG00000013491	rab18b	99	89.706	Poecilia_formosa
ENSCSEG00000016803	rab18b	99	92.821	ENSPLAG00000019136	rab18b	99	89.706	Poecilia_latipinna
ENSCSEG00000016803	rab18b	99	92.821	ENSPMEG00000008223	rab18b	99	89.706	Poecilia_mexicana
ENSCSEG00000016803	rab18b	98	85.417	ENSPPYG00000002172	RAB18	95	84.615	Pongo_abelii
ENSCSEG00000016803	rab18b	98	85.417	ENSPCOG00000018906	RAB18	95	84.615	Propithecus_coquereli
ENSCSEG00000016803	rab18b	99	94.845	ENSPNYG00000001751	rab18b	95	94.845	Pundamilia_nyererei
ENSCSEG00000016803	rab18b	98	86.979	ENSPNAG00000002404	rab18b	94	86.979	Pygocentrus_nattereri
ENSCSEG00000016803	rab18b	99	84.615	ENSRNOG00000018972	Rab18	95	84.615	Rattus_norvegicus
ENSCSEG00000016803	rab18b	98	84.896	ENSRBIG00000035948	RAB18	95	84.103	Rhinopithecus_bieti
ENSCSEG00000016803	rab18b	98	85.417	ENSRROG00000040563	RAB18	95	84.615	Rhinopithecus_roxellana
ENSCSEG00000016803	rab18b	99	85.128	ENSSHAG00000007613	RAB18	95	85.128	Sarcophilus_harrisii
ENSCSEG00000016803	rab18b	99	92.821	ENSSMAG00000011814	rab18b	95	92.821	Scophthalmus_maximus
ENSCSEG00000016803	rab18b	99	94.359	ENSSDUG00000005960	rab18b	99	91.176	Seriola_dumerili
ENSCSEG00000016803	rab18b	99	94.359	ENSSLDG00000006014	rab18b	99	91.176	Seriola_lalandi_dorsalis
ENSCSEG00000016803	rab18b	99	94.359	ENSSPAG00000020875	rab18b	95	94.845	Stegastes_partitus
ENSCSEG00000016803	rab18b	98	85.417	ENSSSCG00000028655	RAB18	95	84.615	Sus_scrofa
ENSCSEG00000016803	rab18b	98	74.429	ENSTGUG00000001105	-	95	73.874	Taeniopygia_guttata
ENSCSEG00000016803	rab18b	94	92.391	ENSTRUG00000004283	rab18b	99	87.255	Takifugu_rubripes
ENSCSEG00000016803	rab18b	99	88.718	ENSTNIG00000007882	rab18b	95	88.718	Tetraodon_nigroviridis
ENSCSEG00000016803	rab18b	98	85.417	ENSVVUG00000001705	RAB18	95	84.615	Vulpes_vulpes
ENSCSEG00000016803	rab18b	94	94.022	ENSXMAG00000006945	rab18b	99	89.216	Xiphophorus_maculatus