EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000016863 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: si:dkey-109n11.2
Full Name: -
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 8405 bases
Position: chr18:62877-71281
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000026382	zf-C2H2	PF00096.26	9.5e-34	1	7
ENSCSEP00000026382	zf-C2H2	PF00096.26	9.5e-34	2	7
ENSCSEP00000026382	zf-C2H2	PF00096.26	9.5e-34	3	7
ENSCSEP00000026382	zf-C2H2	PF00096.26	9.5e-34	4	7
ENSCSEP00000026382	zf-C2H2	PF00096.26	9.5e-34	5	7
ENSCSEP00000026382	zf-C2H2	PF00096.26	9.5e-34	6	7
ENSCSEP00000026382	zf-C2H2	PF00096.26	9.5e-34	7	7
ENSCSEP00000026382	zf-met	PF12874.7	9.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000026735	-	3972	-	ENSCSEP00000026382	1323 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000016863's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000016863's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000016863	-	50	46.341	ENSCSEG00000005935	ZNF319	86	46.341

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000016863	-	99	79.556	ENSAPOG00000014819	-	99	80.593	Acanthochromis_polyacanthus
ENSCSEG00000016863	-	62	89.381	ENSAOCG00000022926	-	97	88.053	Amphiprion_ocellaris
ENSCSEG00000016863	-	99	76.493	ENSCVAG00000022101	-	98	77.554	Cyprinodon_variegatus
ENSCSEG00000016863	-	63	75.922	ENSFHEG00000001706	-	98	78.603	Fundulus_heteroclitus
ENSCSEG00000016863	-	99	70.112	ENSHCOG00000018630	-	99	71.386	Hippocampus_comes
ENSCSEG00000016863	-	63	75.870	ENSKMAG00000018789	-	98	77.076	Kryptolebias_marmoratus
ENSCSEG00000016863	-	98	78.134	ENSMMOG00000013085	-	99	78.869	Mola_mola
ENSCSEG00000016863	-	98	79.213	ENSONIG00000007045	-	100	89.637	Oreochromis_niloticus
ENSCSEG00000016863	-	98	77.321	ENSORLG00015019057	-	98	77.242	Oryzias_latipes_hsok
ENSCSEG00000016863	-	90	47.059	ENSPKIG00000012449	si:dkeyp-69b9.6	82	57.909	Paramormyrops_kingsleyae
ENSCSEG00000016863	-	99	78.544	ENSPFOG00000007425	-	100	79.151	Poecilia_formosa
ENSCSEG00000016863	-	99	76.861	ENSPLAG00000013476	-	98	77.422	Poecilia_latipinna
ENSCSEG00000016863	-	99	75.506	ENSPMEG00000010070	-	98	77.188	Poecilia_mexicana
ENSCSEG00000016863	-	92	54.586	ENSSFOG00015000866	si:dkeyp-69b9.6	94	56.077	Scleropages_formosus
ENSCSEG00000016863	-	99	79.670	ENSSMAG00000016019	-	97	80.795	Scophthalmus_maximus
ENSCSEG00000016863	-	63	91.393	ENSSPAG00000001452	-	99	90.164	Stegastes_partitus