EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSEG00000016892 (Gene tree)
Gene ID
103393786
Gene Symbol
cnot3b
Alias
cnot3|wu:fi20g07|zgc:55934
Full Name
CCR4-NOT transcription complex subunit 3-like
Gene Type
protein_coding
Species
Cynoglossus_semilaevis
Status
putative
Strand
Minus strand
Length
5444 bases
Position
chr18:89959-95402
Accession
103393786
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSEP00000026714Not3PF04065.151.4e-9311
ENSCSEP00000026694Not3PF04065.152e-9311
ENSCSEP00000026754Not3PF04065.152.7e-7411
ENSCSEP00000026744Not3PF04065.152.8e-7411
ENSCSEP00000026714NOT2_3_5PF04153.182.9e-4011
ENSCSEP00000026694NOT2_3_5PF04153.183.5e-4011
ENSCSEP00000026744NOT2_3_5PF04153.185e-1811
ENSCSEP00000026754NOT2_3_5PF04153.184.5e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSET00000027047-2622XM_008330874ENSCSEP00000026694873 (aa)XP_008329096-
ENSCSET00000027098-2412-ENSCSEP00000026744803 (aa)--
ENSCSET00000027107-2397-ENSCSEP00000026754798 (aa)--
ENSCSET00000027067-2199-ENSCSEP00000026714732 (aa)--
Gene Model
Click here to download ENSCSEG00000016892's gene model file
Pathways
Pathway IDPathway NameSource
csem03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000016892's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSEG00000016892cnot3b7080.065ENSCSEG00000003574cnot3a10058.174
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSEG00000016892cnot3b7176.543ENSG00000088038CNOT310089.691Homo_sapiens
ENSCSEG00000016892cnot3b6088.745ENSAPOG00000015002cnot3b7188.583Acanthochromis_polyacanthus
ENSCSEG00000016892cnot3b5978.648ENSAPOG00000015499CNOT38778.648Acanthochromis_polyacanthus
ENSCSEG00000016892cnot3b6280.921ENSAMEG00000004528CNOT39980.656Ailuropoda_melanoleuca
ENSCSEG00000016892cnot3b6889.286ENSACIG00000003652cnot3b9989.286Amphilophus_citrinellus
ENSCSEG00000016892cnot3b6290.558ENSACIG00000006635cnot3a10083.206Amphilophus_citrinellus
ENSCSEG00000016892cnot3b6980.921ENSAOCG00000023769cnot3a7283.972Amphiprion_ocellaris
ENSCSEG00000016892cnot3b9764.390ENSAOCG00000018385-9975.962Amphiprion_ocellaris
ENSCSEG00000016892cnot3b9786.111ENSAPEG00000002640cnot3b9990.909Amphiprion_percula
ENSCSEG00000016892cnot3b7080.921ENSAPEG00000006624cnot3a10059.235Amphiprion_percula
ENSCSEG00000016892cnot3b6784.643ENSATEG00000022737cnot3a10058.082Anabas_testudineus
ENSCSEG00000016892cnot3b9879.339ENSATEG00000015777cnot3b9082.533Anabas_testudineus
ENSCSEG00000016892cnot3b10060.526ENSACAG00000016085CNOT310061.141Anolis_carolinensis
ENSCSEG00000016892cnot3b10061.478ENSANAG00000025756CNOT310080.328Aotus_nancymaae
ENSCSEG00000016892cnot3b7280.921ENSACLG00000021136cnot3a10058.082Astatotilapia_calliptera
ENSCSEG00000016892cnot3b10066.810ENSACLG00000016702cnot3b9882.589Astatotilapia_calliptera
ENSCSEG00000016892cnot3b7391.018ENSAMXG00000009447cnot3b9789.714Astyanax_mexicanus
ENSCSEG00000016892cnot3b7281.373ENSAMXG00000012359cnot3a8279.263Astyanax_mexicanus
ENSCSEG00000016892cnot3b6778.370ENSBTAG00000014900CNOT310080.328Bos_taurus
ENSCSEG00000016892cnot3b5555.556WBGene00003826ntl-38255.556Caenorhabditis_elegans
ENSCSEG00000016892cnot3b10061.408ENSCJAG00000001094CNOT310080.328Callithrix_jacchus
ENSCSEG00000016892cnot3b6280.592ENSCAFG00000002699CNOT310080.328Canis_familiaris
ENSCSEG00000016892cnot3b6280.592ENSCAFG00020018359CNOT310080.328Canis_lupus_dingo
ENSCSEG00000016892cnot3b6476.955ENSCHIG00000015302CNOT39978.289Capra_hircus
ENSCSEG00000016892cnot3b10060.972ENSTSYG00000008058CNOT310080.328Carlito_syrichta
ENSCSEG00000016892cnot3b10060.645ENSCAPG00000009533CNOT310080.328Cavia_aperea
ENSCSEG00000016892cnot3b10062.351ENSCPOG00000020741CNOT310080.328Cavia_porcellus
ENSCSEG00000016892cnot3b10061.702ENSCCAG00000036290CNOT310080.328Cebus_capucinus
ENSCSEG00000016892cnot3b10061.429ENSCATG00000030324CNOT39373.684Cercocebus_atys
ENSCSEG00000016892cnot3b10063.081ENSCLAG00000003302CNOT310086.585Chinchilla_lanigera
ENSCSEG00000016892cnot3b6280.592ENSCSAG00000001900CNOT310080.328Chlorocebus_sabaeus
ENSCSEG00000016892cnot3b10061.559ENSCPBG00000011655CNOT310061.024Chrysemys_picta_bellii
ENSCSEG00000016892cnot3b10046.867ENSCING00000000293-6863.636Ciona_intestinalis
ENSCSEG00000016892cnot3b7076.543ENSCANG00000013408CNOT39373.443Colobus_angolensis_palliatus
ENSCSEG00000016892cnot3b10061.449ENSCGRG00001000855Cnot310080.656Cricetulus_griseus_chok1gshd
ENSCSEG00000016892cnot3b5565.116ENSCGRG00000012929Cnot37862.128Cricetulus_griseus_crigri
ENSCSEG00000016892cnot3b8980.065ENSCVAG00000008168cnot3a10058.460Cyprinodon_variegatus
ENSCSEG00000016892cnot3b10065.269ENSCVAG00000022122cnot3b9082.870Cyprinodon_variegatus
ENSCSEG00000016892cnot3b10059.027ENSDARG00000007135cnot3a10060.220Danio_rerio
ENSCSEG00000016892cnot3b7880.782ENSDARG00000019842cnot3b10061.628Danio_rerio
ENSCSEG00000016892cnot3b6280.263ENSDNOG00000045972CNOT310080.000Dasypus_novemcinctus
ENSCSEG00000016892cnot3b10062.517ENSDORG00000008021Cnot310081.609Dipodomys_ordii
ENSCSEG00000016892cnot3b6265.537FBgn0033029Not35067.857Drosophila_melanogaster
ENSCSEG00000016892cnot3b61100.000ENSETEG00000006305CNOT366100.000Echinops_telfairi
ENSCSEG00000016892cnot3b6370.755ENSEBUG00000010437cnot3a6570.930Eptatretus_burgeri
ENSCSEG00000016892cnot3b6280.592ENSEASG00005021591CNOT310080.328Equus_asinus_asinus
ENSCSEG00000016892cnot3b6280.592ENSECAG00000023181CNOT310080.592Equus_caballus
ENSCSEG00000016892cnot3b10059.874ENSELUG00000000953cnot3b10061.758Esox_lucius
ENSCSEG00000016892cnot3b9277.778ENSELUG00000014743cnot3a8579.724Esox_lucius
ENSCSEG00000016892cnot3b10061.640ENSFCAG00000014042CNOT310080.328Felis_catus
ENSCSEG00000016892cnot3b10063.607ENSFHEG00000001696cnot3b9279.911Fundulus_heteroclitus
ENSCSEG00000016892cnot3b6389.831ENSFHEG00000023166cnot3a7489.831Fundulus_heteroclitus
ENSCSEG00000016892cnot3b10050.956ENSGMOG00000005365cnot3a9953.295Gadus_morhua
ENSCSEG00000016892cnot3b10077.686ENSGAFG00000003459cnot3b8881.900Gambusia_affinis
ENSCSEG00000016892cnot3b7080.392ENSGAFG00000013094cnot3a10058.470Gambusia_affinis
ENSCSEG00000016892cnot3b6374.675ENSGACG00000011489cnot3a8572.152Gasterosteus_aculeatus
ENSCSEG00000016892cnot3b9960.847ENSGAGG00000012677CNOT39960.343Gopherus_agassizii
ENSCSEG00000016892cnot3b10062.317ENSGGOG00000012996CNOT310080.328Gorilla_gorilla
ENSCSEG00000016892cnot3b7280.921ENSHBUG00000005275cnot3a7983.972Haplochromis_burtoni
ENSCSEG00000016892cnot3b9962.691ENSHBUG00000019699cnot3b9964.278Haplochromis_burtoni
ENSCSEG00000016892cnot3b6280.592ENSHGLG00000008821CNOT310081.609Heterocephalus_glaber_female
ENSCSEG00000016892cnot3b5479.151ENSHGLG00100006181CNOT310081.609Heterocephalus_glaber_male
ENSCSEG00000016892cnot3b7081.250ENSHCOG00000020968cnot3a8490.558Hippocampus_comes
ENSCSEG00000016892cnot3b7090.558ENSIPUG00000000167cnot37687.200Ictalurus_punctatus
ENSCSEG00000016892cnot3b10062.361ENSIPUG00000009046cnot3b8679.703Ictalurus_punctatus
ENSCSEG00000016892cnot3b6280.592ENSSTOG00000028248CNOT310080.328Ictidomys_tridecemlineatus
ENSCSEG00000016892cnot3b10061.804ENSJJAG00000014594Cnot310081.609Jaculus_jaculus
ENSCSEG00000016892cnot3b10067.676ENSKMAG00000018723cnot3b9080.995Kryptolebias_marmoratus
ENSCSEG00000016892cnot3b8687.500ENSKMAG00000004863cnot3a10079.677Kryptolebias_marmoratus
ENSCSEG00000016892cnot3b5485.156ENSLBEG00000017296cnot3a9477.778Labrus_bergylta
ENSCSEG00000016892cnot3b9478.537ENSLBEG00000018278cnot3b9683.511Labrus_bergylta
ENSCSEG00000016892cnot3b6379.934ENSLACG00000009742CNOT310059.298Latimeria_chalumnae
ENSCSEG00000016892cnot3b8083.660ENSLOCG00000000005cnot3b10083.607Lepisosteus_oculatus
ENSCSEG00000016892cnot3b6079.672ENSLAFG00000022133CNOT310059.633Loxodonta_africana
ENSCSEG00000016892cnot3b7576.543ENSMFAG00000040073CNOT310080.328Macaca_fascicularis
ENSCSEG00000016892cnot3b5586.555ENSMMUG00000009698CNOT310097.059Macaca_mulatta
ENSCSEG00000016892cnot3b7275.309ENSMNEG00000036750CNOT39679.798Macaca_nemestrina
ENSCSEG00000016892cnot3b9167.595ENSMLEG00000036579CNOT310080.328Mandrillus_leucophaeus
ENSCSEG00000016892cnot3b10067.419ENSMAMG00000019357cnot3b9985.268Mastacembelus_armatus
ENSCSEG00000016892cnot3b7081.250ENSMAMG00000019397cnot3a10060.541Mastacembelus_armatus
ENSCSEG00000016892cnot3b7280.921ENSMZEG00005016304cnot3a10058.082Maylandia_zebra
ENSCSEG00000016892cnot3b10066.918ENSMZEG00005002466cnot3b9882.589Maylandia_zebra
ENSCSEG00000016892cnot3b10062.566ENSMAUG00000014996Cnot310080.656Mesocricetus_auratus
ENSCSEG00000016892cnot3b6577.231ENSMICG00000002370CNOT310080.328Microcebus_murinus
ENSCSEG00000016892cnot3b71100.000ENSMOCG00000013249Cnot399100.000Microtus_ochrogaster
ENSCSEG00000016892cnot3b7186.192ENSMMOG00000013086cnot3b10085.833Mola_mola
ENSCSEG00000016892cnot3b7276.645ENSMMOG00000016446cnot3a10058.124Mola_mola
ENSCSEG00000016892cnot3b6280.592ENSMODG00000004066CNOT310080.328Monodelphis_domestica
ENSCSEG00000016892cnot3b7477.946ENSMALG00000009204cnot3a10057.559Monopterus_albus
ENSCSEG00000016892cnot3b5387.200ENSMALG00000004936cnot3b9387.179Monopterus_albus
ENSCSEG00000016892cnot3b10062.434MGP_CAROLIEiJ_G0029095Cnot310093.000Mus_caroli
ENSCSEG00000016892cnot3b10062.434ENSMUSG00000035632Cnot310093.000Mus_musculus
ENSCSEG00000016892cnot3b10062.434MGP_PahariEiJ_G0020964Cnot310093.000Mus_pahari
ENSCSEG00000016892cnot3b10062.434MGP_SPRETEiJ_G0030148Cnot310093.000Mus_spretus
ENSCSEG00000016892cnot3b6280.592ENSMPUG00000010352CNOT39173.443Mustela_putorius_furo
ENSCSEG00000016892cnot3b10062.434ENSNGAG00000013266Cnot310063.172Nannospalax_galili
ENSCSEG00000016892cnot3b6586.328ENSNBRG00000002401cnot3a7983.972Neolamprologus_brichardi
ENSCSEG00000016892cnot3b7985.887ENSNBRG00000003336cnot3b9886.222Neolamprologus_brichardi
ENSCSEG00000016892cnot3b6485.393ENSNLEG00000006272CNOT310080.328Nomascus_leucogenys
ENSCSEG00000016892cnot3b50100.000ENSOPRG00000001605-63100.000Ochotona_princeps
ENSCSEG00000016892cnot3b10062.781ENSODEG00000000705CNOT310089.873Octodon_degus
ENSCSEG00000016892cnot3b7280.921ENSONIG00000006568cnot3a10060.511Oreochromis_niloticus
ENSCSEG00000016892cnot3b10067.822ENSONIG00000007047cnot3b9783.482Oreochromis_niloticus
ENSCSEG00000016892cnot3b10060.847ENSOCUG00000007691CNOT310080.328Oryctolagus_cuniculus
ENSCSEG00000016892cnot3b7183.333ENSORLG00000005982cnot3b9082.143Oryzias_latipes
ENSCSEG00000016892cnot3b7080.719ENSORLG00000011174cnot3a10057.659Oryzias_latipes
ENSCSEG00000016892cnot3b10066.920ENSORLG00020005779cnot3b9782.143Oryzias_latipes_hni
ENSCSEG00000016892cnot3b7080.392ENSORLG00020008009cnot3a10057.112Oryzias_latipes_hni
ENSCSEG00000016892cnot3b7080.392ENSORLG00015013729cnot3a10057.612Oryzias_latipes_hsok
ENSCSEG00000016892cnot3b7183.333ENSORLG00015019021cnot3b10067.206Oryzias_latipes_hsok
ENSCSEG00000016892cnot3b9781.696ENSOMEG00000015557cnot3b9181.696Oryzias_melastigma
ENSCSEG00000016892cnot3b10061.257ENSOMEG00000010309cnot3a9685.053Oryzias_melastigma
ENSCSEG00000016892cnot3b6477.538ENSOGAG00000006945CNOT310080.328Otolemur_garnettii
ENSCSEG00000016892cnot3b10062.317ENSPPAG00000002748CNOT310080.328Pan_paniscus
ENSCSEG00000016892cnot3b10061.640ENSPPRG00000011705CNOT310080.328Panthera_pardus
ENSCSEG00000016892cnot3b8474.702ENSPTIG00000008781CNOT39685.663Panthera_tigris_altaica
ENSCSEG00000016892cnot3b10062.317ENSPTRG00000011444CNOT310080.328Pan_troglodytes
ENSCSEG00000016892cnot3b10062.317ENSPTRG00000046717-10080.328Pan_troglodytes
ENSCSEG00000016892cnot3b10061.429ENSPANG00000009375CNOT39373.443Papio_anubis
ENSCSEG00000016892cnot3b6890.129ENSPKIG00000015967-10085.657Paramormyrops_kingsleyae
ENSCSEG00000016892cnot3b9490.419ENSPKIG00000011733CNOT37989.655Paramormyrops_kingsleyae
ENSCSEG00000016892cnot3b9864.719ENSPMGG00000022539cnot3b9964.422Periophthalmus_magnuspinnatus
ENSCSEG00000016892cnot3b10062.269ENSPEMG00000024185Cnot310080.656Peromyscus_maniculatus_bairdii
ENSCSEG00000016892cnot3b10059.350ENSPCIG00000023018CNOT310080.000Phascolarctos_cinereus
ENSCSEG00000016892cnot3b9180.392ENSPFOG00000008693cnot3a9658.734Poecilia_formosa
ENSCSEG00000016892cnot3b10074.046ENSPFOG00000007168cnot3b9081.900Poecilia_formosa
ENSCSEG00000016892cnot3b10074.046ENSPLAG00000013457cnot3b9081.900Poecilia_latipinna
ENSCSEG00000016892cnot3b9180.392ENSPLAG00000013324cnot3a10058.779Poecilia_latipinna
ENSCSEG00000016892cnot3b10074.427ENSPMEG00000010184cnot3b9082.353Poecilia_mexicana
ENSCSEG00000016892cnot3b9180.392ENSPMEG00000017718cnot3a10058.470Poecilia_mexicana
ENSCSEG00000016892cnot3b6490.129ENSPREG00000007592cnot3a10086.000Poecilia_reticulata
ENSCSEG00000016892cnot3b9877.686ENSPREG00000000662cnot3b8781.900Poecilia_reticulata
ENSCSEG00000016892cnot3b7176.543ENSPPYG00000010372CNOT39373.115Pongo_abelii
ENSCSEG00000016892cnot3b6491.525ENSPCAG00000011999CNOT37791.525Procavia_capensis
ENSCSEG00000016892cnot3b6877.231ENSPCOG00000017673CNOT39373.684Propithecus_coquereli
ENSCSEG00000016892cnot3b10060.800ENSPVAG00000015564CNOT310061.176Pteropus_vampyrus
ENSCSEG00000016892cnot3b9963.348ENSPNYG00000003358cnot3b9275.463Pundamilia_nyererei
ENSCSEG00000016892cnot3b7280.921ENSPNYG00000002282cnot3a7983.972Pundamilia_nyererei
ENSCSEG00000016892cnot3b8182.117ENSPNAG00000017679cnot3a9889.167Pygocentrus_nattereri
ENSCSEG00000016892cnot3b9775.527ENSPNAG00000027459cnot3b10062.473Pygocentrus_nattereri
ENSCSEG00000016892cnot3b10062.434ENSRNOG00000053234Cnot310080.656Rattus_norvegicus
ENSCSEG00000016892cnot3b7076.543ENSRBIG00000031025CNOT310080.328Rhinopithecus_bieti
ENSCSEG00000016892cnot3b7076.543ENSRROG00000003872CNOT310080.328Rhinopithecus_roxellana
ENSCSEG00000016892cnot3b5434.615YPR072W-5140.343Saccharomyces_cerevisiae
ENSCSEG00000016892cnot3b10061.955ENSSBOG00000030268CNOT310080.328Saimiri_boliviensis_boliviensis
ENSCSEG00000016892cnot3b10082.028ENSSFOG00015019203-9682.028Scleropages_formosus
ENSCSEG00000016892cnot3b9782.949ENSSFOG00015000248cnot38982.949Scleropages_formosus
ENSCSEG00000016892cnot3b7080.592ENSSMAG00000013235cnot3a10057.540Scophthalmus_maximus
ENSCSEG00000016892cnot3b9880.658ENSSMAG00000016031cnot3b10068.182Scophthalmus_maximus
ENSCSEG00000016892cnot3b6389.831ENSSDUG00000008181cnot3a10083.969Seriola_dumerili
ENSCSEG00000016892cnot3b7185.294ENSSDUG00000003428cnot3b9784.821Seriola_dumerili
ENSCSEG00000016892cnot3b6681.250ENSSLDG00000014733cnot3a9956.488Seriola_lalandi_dorsalis
ENSCSEG00000016892cnot3b7185.294ENSSLDG00000014376cnot3b9084.821Seriola_lalandi_dorsalis
ENSCSEG00000016892cnot3b10060.915ENSSPUG00000008510CNOT310060.944Sphenodon_punctatus
ENSCSEG00000016892cnot3b10067.914ENSSPAG00000001429cnot3b9084.375Stegastes_partitus
ENSCSEG00000016892cnot3b6586.328ENSSPAG00000003858cnot3a8779.263Stegastes_partitus
ENSCSEG00000016892cnot3b6280.592ENSSSCG00000003264CNOT310062.467Sus_scrofa
ENSCSEG00000016892cnot3b7079.934ENSTRUG00000015732cnot3a10058.242Takifugu_rubripes
ENSCSEG00000016892cnot3b9992.442ENSTRUG00000007248cnot3b9092.442Takifugu_rubripes
ENSCSEG00000016892cnot3b9170.652ENSTNIG00000005663cnot3b10062.630Tetraodon_nigroviridis
ENSCSEG00000016892cnot3b5685.156ENSTNIG00000008082cnot3a7185.560Tetraodon_nigroviridis
ENSCSEG00000016892cnot3b6280.921ENSUAMG00000005234CNOT39980.656Ursus_americanus
ENSCSEG00000016892cnot3b7384.588ENSUMAG00000010934CNOT39984.286Ursus_maritimus
ENSCSEG00000016892cnot3b6280.592ENSVVUG00000008239CNOT39880.328Vulpes_vulpes
ENSCSEG00000016892cnot3b6483.922ENSXETG00000003166cnot310061.273Xenopus_tropicalis
ENSCSEG00000016892cnot3b7081.517ENSXCOG00000019460cnot3a9990.558Xiphophorus_couchianus
ENSCSEG00000016892cnot3b9475.122ENSXCOG00000018976cnot3b8880.435Xiphophorus_couchianus
ENSCSEG00000016892cnot3b9978.099ENSXMAG00000014176cnot3b9082.353Xiphophorus_maculatus
ENSCSEG00000016892cnot3b7080.392ENSXMAG00000012273cnot3a10058.946Xiphophorus_maculatus

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