EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000016933 (Gene tree)
Gene ID: 103396532
Gene Symbol: rab12
Alias: zgc:111945
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 3187 bases
Position: chr20:10868765-10871951
Accession: 103396532
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000026519	MMR_HSR1	PF01926.23	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000026870	-	732	XM_008334657	ENSCSEP00000026519	243 (aa)	XP_008332879	UPI0004956C01

Gene Model

Click here to download ENSCSEG00000016933's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000016933's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000016933	rab12	68	48.193	ENSCSEG00000007292	rab30	81	48.193
ENSCSEG00000016933	rab12	67	45.062	ENSCSEG00000013400	rab35b	94	41.361
ENSCSEG00000016933	rab12	84	37.379	ENSCSEG00000017026	rab25a	95	37.379
ENSCSEG00000016933	rab12	77	36.170	ENSCSEG00000017024	rab5c	83	36.170
ENSCSEG00000016933	rab12	74	41.667	ENSCSEG00000000205	RAB15	86	41.899
ENSCSEG00000016933	rab12	64	39.744	ENSCSEG00000004941	rab41	73	39.744
ENSCSEG00000016933	rab12	72	36.170	ENSCSEG00000020348	rab33ba	78	36.170
ENSCSEG00000016933	rab12	71	45.930	ENSCSEG00000014416	zgc:171927	80	45.930
ENSCSEG00000016933	rab12	84	37.500	ENSCSEG00000012149	rab11bb	75	42.424
ENSCSEG00000016933	rab12	70	40.698	ENSCSEG00000010582	rab42a	78	40.698
ENSCSEG00000016933	rab12	68	41.317	ENSCSEG00000019722	RAB39B	78	41.317
ENSCSEG00000016933	rab12	65	35.000	ENSCSEG00000012961	rab34a	61	35.000
ENSCSEG00000016933	rab12	67	35.714	ENSCSEG00000014467	rab9b	76	35.714
ENSCSEG00000016933	rab12	79	40.104	ENSCSEG00000017211	rab2a	92	40.306
ENSCSEG00000016933	rab12	55	40.741	ENSCSEG00000011820	rras	87	36.207
ENSCSEG00000016933	rab12	67	30.682	ENSCSEG00000000717	rasl11a	68	30.682
ENSCSEG00000016933	rab12	69	42.262	ENSCSEG00000011996	rab11al	86	42.262
ENSCSEG00000016933	rab12	81	37.245	ENSCSEG00000016498	rab14	80	39.884
ENSCSEG00000016933	rab12	84	45.813	ENSCSEG00000002358	rab13	86	50.581
ENSCSEG00000016933	rab12	77	34.021	ENSCSEG00000010565	rab23	84	33.889
ENSCSEG00000016933	rab12	67	48.171	ENSCSEG00000016803	rab18b	83	48.171
ENSCSEG00000016933	rab12	75	36.702	ENSCSEG00000006243	zgc:101559	80	36.702
ENSCSEG00000016933	rab12	66	38.788	ENSCSEG00000003122	rab6ba	78	39.024
ENSCSEG00000016933	rab12	71	47.674	ENSCSEG00000018732	rab1ba	86	47.674
ENSCSEG00000016933	rab12	66	30.357	ENSCSEG00000003581	rasd4	76	30.357
ENSCSEG00000016933	rab12	65	35.220	ENSCSEG00000019797	rab22a	81	35.220
ENSCSEG00000016933	rab12	84	37.559	ENSCSEG00000007383	rab11a	76	41.212
ENSCSEG00000016933	rab12	70	31.765	ENSCSEG00000003537	rhebl1	90	31.765
ENSCSEG00000016933	rab12	67	39.881	ENSCSEG00000019183	si:dkey-34d22.5	75	39.881
ENSCSEG00000016933	rab12	67	48.780	ENSCSEG00000011816	rab18a	79	48.780
ENSCSEG00000016933	rab12	84	37.379	ENSCSEG00000011982	rab25b	93	37.379
ENSCSEG00000016933	rab12	54	32.090	ENSCSEG00000018987	si:ch73-116o1.2	80	30.357
ENSCSEG00000016933	rab12	77	38.421	ENSCSEG00000005357	-	81	37.870
ENSCSEG00000016933	rab12	67	36.310	ENSCSEG00000010116	rab9a	78	36.310
ENSCSEG00000016933	rab12	84	37.736	ENSCSEG00000007239	-	75	42.424
ENSCSEG00000016933	rab12	68	31.138	ENSCSEG00000016611	rheb	89	31.138
ENSCSEG00000016933	rab12	78	37.173	ENSCSEG00000016556	rab6bb	84	37.714
ENSCSEG00000016933	rab12	84	37.037	ENSCSEG00000007121	rab11ba	68	40.556
ENSCSEG00000016933	rab12	78	45.789	ENSCSEG00000020977	-	82	49.412
ENSCSEG00000016933	rab12	84	36.893	ENSCSEG00000010402	-	84	38.587
ENSCSEG00000016933	rab12	79	36.364	ENSCSEG00000016284	rab33a	58	40.244
ENSCSEG00000016933	rab12	68	42.857	ENSCSEG00000017861	-	78	42.857
ENSCSEG00000016933	rab12	71	44.509	ENSCSEG00000003768	rab15	73	44.509
ENSCSEG00000016933	rab12	50	35.772	ENSCSEG00000009987	rras2	85	31.792
ENSCSEG00000016933	rab12	60	37.500	ENSCSEG00000014479	-	62	37.500
ENSCSEG00000016933	rab12	65	30.864	ENSCSEG00000005737	kras	90	31.214
ENSCSEG00000016933	rab12	68	37.870	ENSCSEG00000002970	RAB7A	75	37.870

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000016933	rab12	100	80.488	ENSG00000206418	RAB12	100	83.740	Homo_sapiens
ENSCSEG00000016933	rab12	89	78.082	ENSAMEG00000007452	RAB12	94	81.735	Ailuropoda_melanoleuca
ENSCSEG00000016933	rab12	100	97.951	ENSACIG00000020616	rab12	100	97.951	Amphilophus_citrinellus
ENSCSEG00000016933	rab12	100	97.119	ENSAOCG00000002130	rab12	100	97.119	Amphiprion_ocellaris
ENSCSEG00000016933	rab12	100	97.119	ENSAPEG00000013255	rab12	100	97.119	Amphiprion_percula
ENSCSEG00000016933	rab12	100	97.942	ENSATEG00000019683	rab12	100	97.942	Anabas_testudineus
ENSCSEG00000016933	rab12	89	84.932	ENSACAG00000003360	RAB12	86	87.892	Anolis_carolinensis
ENSCSEG00000016933	rab12	100	97.942	ENSACLG00000007696	rab12	100	97.942	Astatotilapia_calliptera
ENSCSEG00000016933	rab12	100	88.211	ENSAMXG00000004882	rab12	100	89.024	Astyanax_mexicanus
ENSCSEG00000016933	rab12	100	80.894	ENSBTAG00000010356	RAB12	91	88.341	Bos_taurus
ENSCSEG00000016933	rab12	93	84.071	ENSCJAG00000015468	RAB12	72	83.673	Callithrix_jacchus
ENSCSEG00000016933	rab12	100	80.488	ENSCAFG00020023721	RAB12	84	83.740	Canis_lupus_dingo
ENSCSEG00000016933	rab12	100	80.894	ENSCHIG00000016103	RAB12	91	88.341	Capra_hircus
ENSCSEG00000016933	rab12	86	85.238	ENSCPOG00000022689	RAB12	100	89.524	Cavia_porcellus
ENSCSEG00000016933	rab12	100	80.408	ENSCCAG00000022862	RAB12	100	83.673	Cebus_capucinus
ENSCSEG00000016933	rab12	91	84.375	ENSCATG00000037784	RAB12	93	87.892	Cercocebus_atys
ENSCSEG00000016933	rab12	84	88.780	ENSCSAG00000017569	RAB12	72	83.468	Chlorocebus_sabaeus
ENSCSEG00000016933	rab12	100	79.268	ENSCPBG00000028375	RAB12	91	87.444	Chrysemys_picta_bellii
ENSCSEG00000016933	rab12	89	84.475	ENSCANG00000031453	RAB12	99	88.128	Colobus_angolensis_palliatus
ENSCSEG00000016933	rab12	93	83.700	ENSCGRG00001006958	Rab12	83	82.927	Cricetulus_griseus_chok1gshd
ENSCSEG00000016933	rab12	100	95.935	ENSCVAG00000003539	rab12	100	95.935	Cyprinodon_variegatus
ENSCSEG00000016933	rab12	100	87.654	ENSDARG00000089428	rab12	94	93.182	Danio_rerio
ENSCSEG00000016933	rab12	84	88.293	ENSDNOG00000046064	RAB12	51	87.444	Dasypus_novemcinctus
ENSCSEG00000016933	rab12	92	83.260	ENSDORG00000008920	Rab12	98	87.892	Dipodomys_ordii
ENSCSEG00000016933	rab12	78	66.138	ENSEBUG00000006581	rab12	89	66.484	Eptatretus_burgeri
ENSCSEG00000016933	rab12	100	80.081	ENSEASG00005002926	RAB12	83	83.333	Equus_asinus_asinus
ENSCSEG00000016933	rab12	93	83.700	ENSECAG00000007384	RAB12	71	83.333	Equus_caballus
ENSCSEG00000016933	rab12	100	90.535	ENSELUG00000007123	rab12	100	88.066	Esox_lucius
ENSCSEG00000016933	rab12	93	84.141	ENSFCAG00000027710	RAB12	72	83.740	Felis_catus
ENSCSEG00000016933	rab12	100	95.918	ENSFHEG00000004319	rab12	100	95.918	Fundulus_heteroclitus
ENSCSEG00000016933	rab12	86	91.866	ENSGMOG00000012335	rab12	87	90.431	Gadus_morhua
ENSCSEG00000016933	rab12	93	83.772	ENSGALG00000033608	RAB12	89	87.892	Gallus_gallus
ENSCSEG00000016933	rab12	90	92.202	ENSGACG00000016639	rab12	100	91.284	Gasterosteus_aculeatus
ENSCSEG00000016933	rab12	100	77.959	ENSGAGG00000007278	RAB12	91	87.444	Gopherus_agassizii
ENSCSEG00000016933	rab12	100	97.942	ENSHBUG00000008497	rab12	100	97.942	Haplochromis_burtoni
ENSCSEG00000016933	rab12	97	79.747	ENSHGLG00000006189	RAB12	86	88.235	Heterocephalus_glaber_female
ENSCSEG00000016933	rab12	100	92.181	ENSHCOG00000012376	rab12	100	92.181	Hippocampus_comes
ENSCSEG00000016933	rab12	91	92.308	ENSIPUG00000017401	rab12	90	92.273	Ictalurus_punctatus
ENSCSEG00000016933	rab12	92	82.667	ENSSTOG00000025122	RAB12	96	87.671	Ictidomys_tridecemlineatus
ENSCSEG00000016933	rab12	91	84.375	ENSJJAG00000019064	Rab12	98	87.892	Jaculus_jaculus
ENSCSEG00000016933	rab12	100	91.770	ENSKMAG00000020056	rab12	100	90.123	Kryptolebias_marmoratus
ENSCSEG00000016933	rab12	100	97.531	ENSLBEG00000013756	rab12	100	97.531	Labrus_bergylta
ENSCSEG00000016933	rab12	91	87.444	ENSLACG00000010461	RAB12	90	87.444	Latimeria_chalumnae
ENSCSEG00000016933	rab12	100	83.871	ENSLOCG00000002680	rab12	100	86.290	Lepisosteus_oculatus
ENSCSEG00000016933	rab12	100	80.894	ENSMFAG00000043551	RAB12	100	84.146	Macaca_fascicularis
ENSCSEG00000016933	rab12	91	84.375	ENSMNEG00000040853	RAB12	88	87.892	Macaca_nemestrina
ENSCSEG00000016933	rab12	100	97.942	ENSMAMG00000006862	rab12	100	97.942	Mastacembelus_armatus
ENSCSEG00000016933	rab12	100	97.942	ENSMZEG00005024316	rab12	100	97.942	Maylandia_zebra
ENSCSEG00000016933	rab12	83	84.804	ENSMGAG00000009197	RAB12	100	88.725	Meleagris_gallopavo
ENSCSEG00000016933	rab12	93	83.700	ENSMAUG00000008371	Rab12	83	82.927	Mesocricetus_auratus
ENSCSEG00000016933	rab12	91	83.929	ENSMICG00000030661	RAB12	93	87.444	Microcebus_murinus
ENSCSEG00000016933	rab12	89	84.018	ENSMOCG00000000452	Rab12	100	87.671	Microtus_ochrogaster
ENSCSEG00000016933	rab12	93	84.581	ENSMODG00000021452	RAB12	73	84.146	Monodelphis_domestica
ENSCSEG00000016933	rab12	100	94.650	ENSMALG00000015762	rab12	100	93.416	Monopterus_albus
ENSCSEG00000016933	rab12	93	84.581	MGP_CAROLIEiJ_G0021839	Rab12	84	83.740	Mus_caroli
ENSCSEG00000016933	rab12	100	80.894	ENSMUSG00000023460	Rab12	100	83.740	Mus_musculus
ENSCSEG00000016933	rab12	100	80.894	MGP_PahariEiJ_G0020826	Rab12	100	83.740	Mus_pahari
ENSCSEG00000016933	rab12	93	84.581	MGP_SPRETEiJ_G0022750	Rab12	83	83.740	Mus_spretus
ENSCSEG00000016933	rab12	100	80.488	ENSMLUG00000002883	RAB12	92	88.341	Myotis_lucifugus
ENSCSEG00000016933	rab12	95	81.545	ENSNGAG00000024103	-	95	87.444	Nannospalax_galili
ENSCSEG00000016933	rab12	91	76.786	ENSNGAG00000019722	-	91	76.682	Nannospalax_galili
ENSCSEG00000016933	rab12	100	97.942	ENSNBRG00000014428	rab12	100	97.942	Neolamprologus_brichardi
ENSCSEG00000016933	rab12	100	80.488	ENSNLEG00000006939	RAB12	91	87.892	Nomascus_leucogenys
ENSCSEG00000016933	rab12	100	80.488	ENSMEUG00000000493	RAB12	100	83.740	Notamacropus_eugenii
ENSCSEG00000016933	rab12	89	85.388	ENSODEG00000006414	RAB12	100	89.041	Octodon_degus
ENSCSEG00000016933	rab12	100	97.531	ENSONIG00000018469	rab12	100	97.531	Oreochromis_niloticus
ENSCSEG00000016933	rab12	100	96.296	ENSORLG00000003902	rab12	100	96.296	Oryzias_latipes
ENSCSEG00000016933	rab12	100	95.473	ENSORLG00020005131	rab12	100	93.827	Oryzias_latipes_hni
ENSCSEG00000016933	rab12	100	95.885	ENSORLG00015007869	rab12	100	94.239	Oryzias_latipes_hsok
ENSCSEG00000016933	rab12	100	97.119	ENSOMEG00000008191	rab12	100	97.119	Oryzias_melastigma
ENSCSEG00000016933	rab12	86	84.762	ENSOGAG00000028002	RAB12	99	88.571	Otolemur_garnettii
ENSCSEG00000016933	rab12	86	84.762	ENSOARG00000000728	RAB12	88	87.442	Ovis_aries
ENSCSEG00000016933	rab12	84	84.541	ENSPPAG00000009152	RAB12	97	88.835	Pan_paniscus
ENSCSEG00000016933	rab12	100	80.488	ENSPPRG00000024521	RAB12	100	83.740	Panthera_pardus
ENSCSEG00000016933	rab12	100	80.488	ENSPTRG00000009853	RAB12	100	83.740	Pan_troglodytes
ENSCSEG00000016933	rab12	100	80.972	ENSPANG00000009320	RAB12	90	88.341	Papio_anubis
ENSCSEG00000016933	rab12	100	88.525	ENSPKIG00000008579	rab12	100	88.934	Paramormyrops_kingsleyae
ENSCSEG00000016933	rab12	100	88.889	ENSPMGG00000001890	rab12	100	90.123	Periophthalmus_magnuspinnatus
ENSCSEG00000016933	rab12	93	84.141	ENSPEMG00000021032	Rab12	84	83.333	Peromyscus_maniculatus_bairdii
ENSCSEG00000016933	rab12	93	84.141	ENSPCIG00000010453	RAB12	61	83.740	Phascolarctos_cinereus
ENSCSEG00000016933	rab12	100	94.672	ENSPFOG00000001579	rab12	100	94.672	Poecilia_formosa
ENSCSEG00000016933	rab12	100	94.672	ENSPLAG00000013594	rab12	100	94.672	Poecilia_latipinna
ENSCSEG00000016933	rab12	100	94.672	ENSPMEG00000010417	rab12	100	94.672	Poecilia_mexicana
ENSCSEG00000016933	rab12	100	94.672	ENSPREG00000017487	rab12	100	95.082	Poecilia_reticulata
ENSCSEG00000016933	rab12	93	84.141	ENSPPYG00000009015	-	72	83.740	Pongo_abelii
ENSCSEG00000016933	rab12	100	80.081	ENSPCAG00000015007	RAB12	100	83.333	Procavia_capensis
ENSCSEG00000016933	rab12	100	80.488	ENSPCOG00000019816	RAB12	100	83.740	Propithecus_coquereli
ENSCSEG00000016933	rab12	100	80.081	ENSPVAG00000002757	RAB12	91	87.444	Pteropus_vampyrus
ENSCSEG00000016933	rab12	100	97.942	ENSPNYG00000005654	rab12	100	97.942	Pundamilia_nyererei
ENSCSEG00000016933	rab12	100	97.942	ENSPNYG00000023905	rab12	100	97.942	Pundamilia_nyererei
ENSCSEG00000016933	rab12	100	88.211	ENSPNAG00000015031	rab12	100	89.024	Pygocentrus_nattereri
ENSCSEG00000016933	rab12	93	82.456	ENSRNOG00000019295	Rab12	91	82.018	Rattus_norvegicus
ENSCSEG00000016933	rab12	91	84.375	ENSRBIG00000028760	RAB12	96	87.892	Rhinopithecus_bieti
ENSCSEG00000016933	rab12	91	84.375	ENSRROG00000019249	RAB12	93	87.892	Rhinopithecus_roxellana
ENSCSEG00000016933	rab12	94	79.654	ENSSBOG00000021125	RAB12	80	88.517	Saimiri_boliviensis_boliviensis
ENSCSEG00000016933	rab12	93	83.628	ENSSHAG00000001489	RAB12	100	83.628	Sarcophilus_harrisii
ENSCSEG00000016933	rab12	100	96.708	ENSSMAG00000012678	rab12	100	96.708	Scophthalmus_maximus
ENSCSEG00000016933	rab12	100	98.765	ENSSDUG00000008505	rab12	100	98.765	Seriola_dumerili
ENSCSEG00000016933	rab12	100	98.765	ENSSLDG00000022239	rab12	100	98.765	Seriola_lalandi_dorsalis
ENSCSEG00000016933	rab12	100	81.707	ENSSPUG00000003222	RAB12	100	84.959	Sphenodon_punctatus
ENSCSEG00000016933	rab12	100	97.531	ENSSPAG00000010822	rab12	100	97.531	Stegastes_partitus
ENSCSEG00000016933	rab12	100	80.894	ENSSSCG00000038026	RAB12	91	88.789	Sus_scrofa
ENSCSEG00000016933	rab12	93	84.211	ENSTGUG00000009889	RAB12	89	88.341	Taeniopygia_guttata
ENSCSEG00000016933	rab12	100	93.827	ENSTRUG00000024455	rab12	100	92.181	Takifugu_rubripes
ENSCSEG00000016933	rab12	100	94.239	ENSTNIG00000014859	rab12	100	92.593	Tetraodon_nigroviridis
ENSCSEG00000016933	rab12	89	84.475	ENSTTRG00000008711	RAB12	99	88.128	Tursiops_truncatus
ENSCSEG00000016933	rab12	100	80.488	ENSUAMG00000018092	RAB12	91	87.892	Ursus_americanus
ENSCSEG00000016933	rab12	90	83.710	ENSVVUG00000011748	RAB12	99	87.330	Vulpes_vulpes
ENSCSEG00000016933	rab12	89	88.532	ENSXETG00000004289	rab12	72	88.393	Xenopus_tropicalis
ENSCSEG00000016933	rab12	100	94.262	ENSXCOG00000019310	rab12	100	94.672	Xiphophorus_couchianus
ENSCSEG00000016933	rab12	100	94.672	ENSXMAG00000023617	rab12	100	95.082	Xiphophorus_maculatus