EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000017088 (Gene tree)
Gene ID: 103378460
Gene Symbol: gfm1
Alias: fc96f12|wu:fc96f12|zgc:154041
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 14305 bases
Position: chr4:16965671-16979975
Accession: 103378460
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000026799	GTP_EFTU	PF00009.27	1.6e-61	1	1
ENSCSEP00000026799	GTP_EFTU_D2	PF03144.25	5.4e-17	1	1
ENSCSEP00000026799	EFG_IV	PF03764.18	6.6e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000027156	-	2073	XM_008309682	ENSCSEP00000026799	690 (aa)	XP_008307904	-

Gene Model

Click here to download ENSCSEG00000017088's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000017088's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000017088	gfm1	97	31.275	ENSCSEG00000013115	gfm2	96	31.094
ENSCSEG00000017088	gfm1	72	38.926	ENSCSEG00000002828	-	66	38.926

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000017088	gfm1	98	76.217	ENSG00000168827	GFM1	100	91.667	Homo_sapiens
ENSCSEG00000017088	gfm1	92	83.308	ENSAPOG00000016489	gfm1	95	83.308	Acanthochromis_polyacanthus
ENSCSEG00000017088	gfm1	98	76.880	ENSAMEG00000013542	GFM1	95	76.880	Ailuropoda_melanoleuca
ENSCSEG00000017088	gfm1	99	77.686	ENSACIG00000014465	gfm1	94	77.686	Amphilophus_citrinellus
ENSCSEG00000017088	gfm1	99	81.881	ENSAOCG00000006023	gfm1	97	81.881	Amphiprion_ocellaris
ENSCSEG00000017088	gfm1	99	81.604	ENSAPEG00000024499	gfm1	99	81.025	Amphiprion_percula
ENSCSEG00000017088	gfm1	99	82.538	ENSATEG00000013789	gfm1	98	82.538	Anabas_testudineus
ENSCSEG00000017088	gfm1	99	75.691	ENSAPLG00000005022	GFM1	99	75.691	Anas_platyrhynchos
ENSCSEG00000017088	gfm1	99	76.625	ENSACAG00000006829	GFM1	98	76.625	Anolis_carolinensis
ENSCSEG00000017088	gfm1	98	75.661	ENSANAG00000035983	GFM1	96	75.661	Aotus_nancymaae
ENSCSEG00000017088	gfm1	99	83.679	ENSACLG00000016586	gfm1	99	82.735	Astatotilapia_calliptera
ENSCSEG00000017088	gfm1	99	79.201	ENSAMXG00000013435	gfm1	98	78.095	Astyanax_mexicanus
ENSCSEG00000017088	gfm1	98	76.602	ENSBTAG00000027795	GFM1	95	76.602	Bos_taurus
ENSCSEG00000017088	gfm1	96	53.352	WBGene00009246	gfm-1	93	53.352	Caenorhabditis_elegans
ENSCSEG00000017088	gfm1	98	76.356	ENSCJAG00000000363	GFM1	96	76.356	Callithrix_jacchus
ENSCSEG00000017088	gfm1	98	77.019	ENSCAFG00000009006	GFM1	100	76.331	Canis_familiaris
ENSCSEG00000017088	gfm1	98	77.019	ENSCAFG00020005878	GFM1	98	77.019	Canis_lupus_dingo
ENSCSEG00000017088	gfm1	98	76.880	ENSCHIG00000015220	GFM1	95	76.880	Capra_hircus
ENSCSEG00000017088	gfm1	98	76.217	ENSTSYG00000002013	GFM1	95	76.217	Carlito_syrichta
ENSCSEG00000017088	gfm1	99	65.937	ENSCAPG00000005699	GFM1	97	66.436	Cavia_aperea
ENSCSEG00000017088	gfm1	98	76.634	ENSCPOG00000001194	GFM1	95	76.634	Cavia_porcellus
ENSCSEG00000017088	gfm1	98	75.661	ENSCCAG00000025561	GFM1	96	75.661	Cebus_capucinus
ENSCSEG00000017088	gfm1	99	78.488	ENSCATG00000037622	GFM1	96	78.488	Cercocebus_atys
ENSCSEG00000017088	gfm1	98	75.661	ENSCLAG00000002503	GFM1	95	75.661	Chinchilla_lanigera
ENSCSEG00000017088	gfm1	99	76.283	ENSCSAG00000012162	GFM1	96	76.283	Chlorocebus_sabaeus
ENSCSEG00000017088	gfm1	98	68.384	ENSCHOG00000004867	GFM1	95	68.384	Choloepus_hoffmanni
ENSCSEG00000017088	gfm1	99	77.285	ENSCPBG00000018367	GFM1	97	77.285	Chrysemys_picta_bellii
ENSCSEG00000017088	gfm1	96	55.524	ENSCING00000011960	-	93	55.524	Ciona_intestinalis
ENSCSEG00000017088	gfm1	98	55.989	ENSCSAVG00000008514	-	99	55.556	Ciona_savignyi
ENSCSEG00000017088	gfm1	99	76.144	ENSCANG00000031714	GFM1	96	76.144	Colobus_angolensis_palliatus
ENSCSEG00000017088	gfm1	98	76.569	ENSCGRG00001022095	GFM1	95	76.569	Cricetulus_griseus_chok1gshd
ENSCSEG00000017088	gfm1	98	76.569	ENSCGRG00000012043	GFM1	95	76.569	Cricetulus_griseus_crigri
ENSCSEG00000017088	gfm1	99	83.956	ENSCVAG00000004126	gfm1	100	84.507	Cyprinodon_variegatus
ENSCSEG00000017088	gfm1	99	77.455	ENSDARG00000063624	gfm1	97	77.455	Danio_rerio
ENSCSEG00000017088	gfm1	58	77.262	ENSDNOG00000016385	-	100	77.262	Dasypus_novemcinctus
ENSCSEG00000017088	gfm1	98	74.409	ENSDORG00000014165	Gfm1	96	74.409	Dipodomys_ordii
ENSCSEG00000017088	gfm1	97	64.175	FBgn0263133	mEFG1	95	64.175	Drosophila_melanogaster
ENSCSEG00000017088	gfm1	92	86.364	ENSETEG00000019197	GFM1	86	86.364	Echinops_telfairi
ENSCSEG00000017088	gfm1	91	60.602	ENSEBUG00000012794	gfm1	99	60.602	Eptatretus_burgeri
ENSCSEG00000017088	gfm1	98	55.972	ENSEEUG00000000429	GFM1	99	55.972	Erinaceus_europaeus
ENSCSEG00000017088	gfm1	99	80.775	ENSELUG00000014728	gfm1	97	80.775	Esox_lucius
ENSCSEG00000017088	gfm1	98	76.495	ENSFCAG00000013291	GFM1	95	76.495	Felis_catus
ENSCSEG00000017088	gfm1	92	75.111	ENSFALG00000007619	GFM1	100	76.296	Ficedula_albicollis
ENSCSEG00000017088	gfm1	99	76.006	ENSFDAG00000016559	GFM1	96	76.006	Fukomys_damarensis
ENSCSEG00000017088	gfm1	99	83.126	ENSFHEG00000006091	gfm1	97	83.126	Fundulus_heteroclitus
ENSCSEG00000017088	gfm1	99	80.330	ENSGMOG00000010161	gfm1	100	80.330	Gadus_morhua
ENSCSEG00000017088	gfm1	99	75.623	ENSGALG00000009634	GFM1	98	75.623	Gallus_gallus
ENSCSEG00000017088	gfm1	99	83.126	ENSGAFG00000012527	gfm1	97	83.126	Gambusia_affinis
ENSCSEG00000017088	gfm1	99	82.988	ENSGACG00000009864	gfm1	97	82.988	Gasterosteus_aculeatus
ENSCSEG00000017088	gfm1	98	76.217	ENSGGOG00000003085	GFM1	96	76.217	Gorilla_gorilla
ENSCSEG00000017088	gfm1	99	83.817	ENSHBUG00000002120	gfm1	97	83.817	Haplochromis_burtoni
ENSCSEG00000017088	gfm1	98	75.104	ENSHGLG00000016855	GFM1	95	75.104	Heterocephalus_glaber_female
ENSCSEG00000017088	gfm1	98	75.104	ENSHGLG00100013049	GFM1	95	75.104	Heterocephalus_glaber_male
ENSCSEG00000017088	gfm1	99	82.158	ENSHCOG00000007638	gfm1	99	81.640	Hippocampus_comes
ENSCSEG00000017088	gfm1	99	79.391	ENSIPUG00000005873	gfm1	97	79.391	Ictalurus_punctatus
ENSCSEG00000017088	gfm1	98	74.826	ENSSTOG00000010150	GFM1	97	74.826	Ictidomys_tridecemlineatus
ENSCSEG00000017088	gfm1	98	75.905	ENSJJAG00000016447	Gfm1	96	75.905	Jaculus_jaculus
ENSCSEG00000017088	gfm1	99	81.051	ENSKMAG00000020768	gfm1	97	81.051	Kryptolebias_marmoratus
ENSCSEG00000017088	gfm1	96	82.571	ENSLBEG00000021315	gfm1	100	82.571	Labrus_bergylta
ENSCSEG00000017088	gfm1	99	77.732	ENSLACG00000012295	GFM1	98	77.732	Latimeria_chalumnae
ENSCSEG00000017088	gfm1	99	74.074	ENSLOCG00000003778	gfm1	99	74.074	Lepisosteus_oculatus
ENSCSEG00000017088	gfm1	99	74.105	ENSLAFG00000010945	GFM1	99	73.157	Loxodonta_africana
ENSCSEG00000017088	gfm1	99	76.283	ENSMFAG00000035731	GFM1	96	76.283	Macaca_fascicularis
ENSCSEG00000017088	gfm1	99	76.283	ENSMMUG00000004961	GFM1	96	76.283	Macaca_mulatta
ENSCSEG00000017088	gfm1	99	76.144	ENSMNEG00000033245	GFM1	96	76.144	Macaca_nemestrina
ENSCSEG00000017088	gfm1	99	74.324	ENSMLEG00000030908	GFM1	99	74.324	Mandrillus_leucophaeus
ENSCSEG00000017088	gfm1	99	83.126	ENSMAMG00000011760	gfm1	97	83.126	Mastacembelus_armatus
ENSCSEG00000017088	gfm1	99	83.817	ENSMZEG00005016639	gfm1	97	83.817	Maylandia_zebra
ENSCSEG00000017088	gfm1	99	75.346	ENSMGAG00000010641	GFM1	97	75.346	Meleagris_gallopavo
ENSCSEG00000017088	gfm1	98	76.602	ENSMAUG00000000611	Gfm1	96	76.602	Mesocricetus_auratus
ENSCSEG00000017088	gfm1	99	77.083	ENSMICG00000049086	GFM1	95	77.083	Microcebus_murinus
ENSCSEG00000017088	gfm1	98	77.437	ENSMOCG00000000465	Gfm1	96	77.437	Microtus_ochrogaster
ENSCSEG00000017088	gfm1	99	83.264	ENSMMOG00000012538	gfm1	98	83.264	Mola_mola
ENSCSEG00000017088	gfm1	99	75.519	ENSMODG00000015673	GFM1	97	75.519	Monodelphis_domestica
ENSCSEG00000017088	gfm1	98	81.729	ENSMALG00000012508	gfm1	95	81.729	Monopterus_albus
ENSCSEG00000017088	gfm1	98	76.569	MGP_CAROLIEiJ_G0025052	Gfm1	95	76.569	Mus_caroli
ENSCSEG00000017088	gfm1	98	76.290	ENSMUSG00000027774	Gfm1	95	76.290	Mus_musculus
ENSCSEG00000017088	gfm1	98	76.151	MGP_PahariEiJ_G0026495	Gfm1	95	76.151	Mus_pahari
ENSCSEG00000017088	gfm1	98	76.290	MGP_SPRETEiJ_G0025994	Gfm1	95	76.290	Mus_spretus
ENSCSEG00000017088	gfm1	98	76.773	ENSMPUG00000002859	GFM1	95	76.773	Mustela_putorius_furo
ENSCSEG00000017088	gfm1	98	76.773	ENSMLUG00000000452	GFM1	95	76.773	Myotis_lucifugus
ENSCSEG00000017088	gfm1	98	76.323	ENSNGAG00000012375	Gfm1	96	76.323	Nannospalax_galili
ENSCSEG00000017088	gfm1	99	83.817	ENSNBRG00000004631	gfm1	99	83.817	Neolamprologus_brichardi
ENSCSEG00000017088	gfm1	98	76.217	ENSNLEG00000004176	GFM1	96	76.217	Nomascus_leucogenys
ENSCSEG00000017088	gfm1	91	67.527	ENSMEUG00000007784	GFM1	96	67.527	Notamacropus_eugenii
ENSCSEG00000017088	gfm1	98	75.487	ENSOPRG00000009860	GFM1	97	75.487	Ochotona_princeps
ENSCSEG00000017088	gfm1	98	76.495	ENSODEG00000004316	GFM1	95	76.495	Octodon_degus
ENSCSEG00000017088	gfm1	99	83.679	ENSONIG00000003772	gfm1	97	83.679	Oreochromis_niloticus
ENSCSEG00000017088	gfm1	98	76.356	ENSOCUG00000013561	GFM1	95	76.356	Oryctolagus_cuniculus
ENSCSEG00000017088	gfm1	97	83.051	ENSORLG00000006487	gfm1	100	83.051	Oryzias_latipes
ENSCSEG00000017088	gfm1	99	82.988	ENSORLG00020003362	gfm1	97	82.988	Oryzias_latipes_hni
ENSCSEG00000017088	gfm1	99	82.573	ENSORLG00015005829	gfm1	97	82.573	Oryzias_latipes_hsok
ENSCSEG00000017088	gfm1	99	82.988	ENSOMEG00000012894	gfm1	97	82.988	Oryzias_melastigma
ENSCSEG00000017088	gfm1	99	75.972	ENSOGAG00000008298	GFM1	95	75.972	Otolemur_garnettii
ENSCSEG00000017088	gfm1	98	76.144	ENSOARG00000002409	GFM1	99	76.144	Ovis_aries
ENSCSEG00000017088	gfm1	98	76.217	ENSPPAG00000033881	GFM1	96	76.217	Pan_paniscus
ENSCSEG00000017088	gfm1	98	76.495	ENSPPRG00000009281	GFM1	95	76.495	Panthera_pardus
ENSCSEG00000017088	gfm1	98	76.356	ENSPTIG00000012416	GFM1	95	76.356	Panthera_tigris_altaica
ENSCSEG00000017088	gfm1	98	76.217	ENSPTRG00000015570	GFM1	96	76.217	Pan_troglodytes
ENSCSEG00000017088	gfm1	99	76.144	ENSPANG00000016512	GFM1	96	76.144	Papio_anubis
ENSCSEG00000017088	gfm1	99	78.838	ENSPKIG00000004876	gfm1	97	78.838	Paramormyrops_kingsleyae
ENSCSEG00000017088	gfm1	99	78.532	ENSPSIG00000012567	GFM1	97	78.532	Pelodiscus_sinensis
ENSCSEG00000017088	gfm1	99	83.427	ENSPMGG00000014068	gfm1	100	83.427	Periophthalmus_magnuspinnatus
ENSCSEG00000017088	gfm1	98	76.709	ENSPEMG00000008942	Gfm1	95	76.709	Peromyscus_maniculatus_bairdii
ENSCSEG00000017088	gfm1	84	75.327	ENSPCIG00000020195	GFM1	95	75.285	Phascolarctos_cinereus
ENSCSEG00000017088	gfm1	99	83.956	ENSPFOG00000011022	gfm1	97	83.956	Poecilia_formosa
ENSCSEG00000017088	gfm1	99	83.676	ENSPLAG00000019585	gfm1	97	83.676	Poecilia_latipinna
ENSCSEG00000017088	gfm1	99	83.817	ENSPMEG00000012376	gfm1	97	83.817	Poecilia_mexicana
ENSCSEG00000017088	gfm1	99	84.094	ENSPREG00000001332	gfm1	92	84.094	Poecilia_reticulata
ENSCSEG00000017088	gfm1	98	76.217	ENSPPYG00000014244	GFM1	96	76.217	Pongo_abelii
ENSCSEG00000017088	gfm1	96	74.111	ENSPCAG00000008934	GFM1	100	74.111	Procavia_capensis
ENSCSEG00000017088	gfm1	99	76.667	ENSPCOG00000022259	GFM1	95	76.667	Propithecus_coquereli
ENSCSEG00000017088	gfm1	98	76.356	ENSPVAG00000013605	GFM1	95	76.356	Pteropus_vampyrus
ENSCSEG00000017088	gfm1	99	83.817	ENSPNYG00000006037	gfm1	98	83.817	Pundamilia_nyererei
ENSCSEG00000017088	gfm1	99	79.477	ENSPNAG00000001237	gfm1	98	79.477	Pygocentrus_nattereri
ENSCSEG00000017088	gfm1	98	76.290	ENSRNOG00000012873	Gfm1	95	76.290	Rattus_norvegicus
ENSCSEG00000017088	gfm1	99	76.144	ENSRBIG00000031363	GFM1	96	76.144	Rhinopithecus_bieti
ENSCSEG00000017088	gfm1	99	76.283	ENSRROG00000031081	GFM1	96	76.283	Rhinopithecus_roxellana
ENSCSEG00000017088	gfm1	94	54.101	YLR069C	-	90	54.101	Saccharomyces_cerevisiae
ENSCSEG00000017088	gfm1	98	75.939	ENSSBOG00000023252	GFM1	96	75.939	Saimiri_boliviensis_boliviensis
ENSCSEG00000017088	gfm1	99	75.380	ENSSHAG00000017772	GFM1	97	75.380	Sarcophilus_harrisii
ENSCSEG00000017088	gfm1	99	79.115	ENSSFOG00015003117	gfm1	99	79.115	Scleropages_formosus
ENSCSEG00000017088	gfm1	99	82.711	ENSSMAG00000013221	gfm1	97	82.711	Scophthalmus_maximus
ENSCSEG00000017088	gfm1	99	84.232	ENSSDUG00000018665	gfm1	97	84.232	Seriola_dumerili
ENSCSEG00000017088	gfm1	99	84.371	ENSSLDG00000020606	gfm1	97	84.371	Seriola_lalandi_dorsalis
ENSCSEG00000017088	gfm1	99	74.792	ENSSPUG00000018686	GFM1	98	74.792	Sphenodon_punctatus
ENSCSEG00000017088	gfm1	99	83.126	ENSSPAG00000008800	gfm1	97	83.126	Stegastes_partitus
ENSCSEG00000017088	gfm1	98	76.184	ENSSSCG00000025651	GFM1	95	76.184	Sus_scrofa
ENSCSEG00000017088	gfm1	99	81.604	ENSTRUG00000009244	gfm1	97	81.604	Takifugu_rubripes
ENSCSEG00000017088	gfm1	99	83.541	ENSTNIG00000007729	gfm1	97	83.541	Tetraodon_nigroviridis
ENSCSEG00000017088	gfm1	86	86.154	ENSTBEG00000017404	GFM1	79	86.154	Tupaia_belangeri
ENSCSEG00000017088	gfm1	98	76.602	ENSTTRG00000001735	GFM1	95	76.602	Tursiops_truncatus
ENSCSEG00000017088	gfm1	98	76.634	ENSUAMG00000026381	GFM1	95	76.634	Ursus_americanus
ENSCSEG00000017088	gfm1	98	76.634	ENSUMAG00000011268	GFM1	95	76.634	Ursus_maritimus
ENSCSEG00000017088	gfm1	98	73.677	ENSVPAG00000009444	GFM1	95	73.677	Vicugna_pacos
ENSCSEG00000017088	gfm1	98	76.816	ENSVVUG00000020091	GFM1	100	76.036	Vulpes_vulpes
ENSCSEG00000017088	gfm1	98	79.666	ENSXETG00000032551	GFM1	95	79.666	Xenopus_tropicalis
ENSCSEG00000017088	gfm1	51	80.670	ENSXCOG00000012590	gfm1	89	85.973	Xiphophorus_couchianus
ENSCSEG00000017088	gfm1	99	83.402	ENSXMAG00000000261	gfm1	97	83.402	Xiphophorus_maculatus