EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000017200 (Gene tree)
Gene ID: 103396131
Gene Symbol: imp3
Alias: zgc:56526
Full Name: IMP3%2C U3 small nucleolar ribonucleoprotein
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 1361 bases
Position: chr20:4293958-4295318
Accession: 103396131
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000026926	S4	PF01479.25	6.2e-09	1	1
ENSCSEP00000026926	Ribosomal_S4	PF00163.19	3.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000027286	-	552	XM_008334104	ENSCSEP00000026926	183 (aa)	XP_008332326	UPI0004969D99

Gene Model

Click here to download ENSCSEG00000017200's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000017200's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000017200	imp3	99	89.560	ENSAPOG00000014720	imp3	99	89.560	Acanthochromis_polyacanthus
ENSCSEG00000017200	imp3	99	69.780	ENSAMEG00000019247	IMP3	99	69.780	Ailuropoda_melanoleuca
ENSCSEG00000017200	imp3	98	89.944	ENSACIG00000022070	imp3	96	89.944	Amphilophus_citrinellus
ENSCSEG00000017200	imp3	99	90.110	ENSAOCG00000015761	imp3	99	90.110	Amphiprion_ocellaris
ENSCSEG00000017200	imp3	99	90.110	ENSAPEG00000005250	imp3	99	90.110	Amphiprion_percula
ENSCSEG00000017200	imp3	99	90.659	ENSATEG00000020021	imp3	99	90.659	Anabas_testudineus
ENSCSEG00000017200	imp3	99	69.730	ENSACAG00000016259	IMP3	99	69.730	Anolis_carolinensis
ENSCSEG00000017200	imp3	99	58.242	ENSANAG00000036874	-	99	58.242	Aotus_nancymaae
ENSCSEG00000017200	imp3	99	68.132	ENSANAG00000016669	-	99	68.132	Aotus_nancymaae
ENSCSEG00000017200	imp3	99	91.209	ENSACLG00000009929	imp3	99	91.209	Astatotilapia_calliptera
ENSCSEG00000017200	imp3	96	86.286	ENSAMXG00000018715	imp3	99	86.286	Astyanax_mexicanus
ENSCSEG00000017200	imp3	100	50.273	WBGene00016740	C48B6.2	100	50.273	Caenorhabditis_elegans
ENSCSEG00000017200	imp3	99	68.132	ENSCJAG00000044585	IMP3	99	68.132	Callithrix_jacchus
ENSCSEG00000017200	imp3	99	66.484	ENSCAFG00000018039	IMP3	81	66.484	Canis_familiaris
ENSCSEG00000017200	imp3	99	66.484	ENSCAFG00020003760	-	99	66.484	Canis_lupus_dingo
ENSCSEG00000017200	imp3	99	55.495	ENSCAFG00020006737	-	99	56.044	Canis_lupus_dingo
ENSCSEG00000017200	imp3	99	69.231	ENSCHIG00000006295	IMP3	99	69.231	Capra_hircus
ENSCSEG00000017200	imp3	99	68.681	ENSTSYG00000005503	IMP3	99	68.681	Carlito_syrichta
ENSCSEG00000017200	imp3	99	69.231	ENSCPOG00000012016	IMP3	99	69.231	Cavia_porcellus
ENSCSEG00000017200	imp3	98	60.000	ENSCCAG00000023378	-	99	58.621	Cebus_capucinus
ENSCSEG00000017200	imp3	99	68.132	ENSCCAG00000002712	-	99	68.132	Cebus_capucinus
ENSCSEG00000017200	imp3	99	68.681	ENSCATG00000015188	IMP3	99	68.681	Cercocebus_atys
ENSCSEG00000017200	imp3	99	68.681	ENSCSAG00000019732	IMP3	99	68.681	Chlorocebus_sabaeus
ENSCSEG00000017200	imp3	99	69.231	ENSCHOG00000012046	IMP3	99	69.231	Choloepus_hoffmanni
ENSCSEG00000017200	imp3	99	66.120	ENSCPBG00000021662	IMP3	99	66.120	Chrysemys_picta_bellii
ENSCSEG00000017200	imp3	99	67.403	ENSCING00000004233	-	100	67.403	Ciona_intestinalis
ENSCSEG00000017200	imp3	99	67.403	ENSCSAVG00000000698	-	100	67.403	Ciona_savignyi
ENSCSEG00000017200	imp3	99	68.681	ENSCANG00000018342	IMP3	99	68.681	Colobus_angolensis_palliatus
ENSCSEG00000017200	imp3	99	67.582	ENSCGRG00001001326	Imp3	99	67.582	Cricetulus_griseus_chok1gshd
ENSCSEG00000017200	imp3	99	67.582	ENSCGRG00000018907	Imp3	99	67.582	Cricetulus_griseus_crigri
ENSCSEG00000017200	imp3	99	82.011	ENSCVAG00000019511	imp3	99	82.011	Cyprinodon_variegatus
ENSCSEG00000017200	imp3	99	87.363	ENSDARG00000115266	imp3	100	86.982	Danio_rerio
ENSCSEG00000017200	imp3	99	69.231	ENSDNOG00000015787	IMP3	80	69.231	Dasypus_novemcinctus
ENSCSEG00000017200	imp3	99	68.132	ENSDORG00000029301	Imp3	99	68.132	Dipodomys_ordii
ENSCSEG00000017200	imp3	99	62.431	FBgn0034232	CG4866	100	62.431	Drosophila_melanogaster
ENSCSEG00000017200	imp3	99	70.330	ENSETEG00000004278	IMP3	99	70.330	Echinops_telfairi
ENSCSEG00000017200	imp3	99	75.138	ENSEBUG00000002343	imp3	99	75.138	Eptatretus_burgeri
ENSCSEG00000017200	imp3	99	69.231	ENSEASG00005015693	IMP3	99	69.231	Equus_asinus_asinus
ENSCSEG00000017200	imp3	99	68.681	ENSECAG00000015786	IMP3	99	68.681	Equus_caballus
ENSCSEG00000017200	imp3	99	89.011	ENSELUG00000023264	imp3	99	89.011	Esox_lucius
ENSCSEG00000017200	imp3	99	68.681	ENSFCAG00000040328	IMP3	99	68.681	Felis_catus
ENSCSEG00000017200	imp3	70	56.589	ENSFALG00000014811	IMP3	98	58.915	Ficedula_albicollis
ENSCSEG00000017200	imp3	99	69.231	ENSFDAG00000018422	IMP3	99	69.231	Fukomys_damarensis
ENSCSEG00000017200	imp3	99	88.462	ENSFHEG00000016954	imp3	99	88.462	Fundulus_heteroclitus
ENSCSEG00000017200	imp3	99	88.462	ENSGMOG00000018162	imp3	99	88.462	Gadus_morhua
ENSCSEG00000017200	imp3	99	55.191	ENSGALG00000040238	IMP3	99	56.831	Gallus_gallus
ENSCSEG00000017200	imp3	99	89.011	ENSGAFG00000007425	imp3	99	89.011	Gambusia_affinis
ENSCSEG00000017200	imp3	99	89.560	ENSGACG00000015998	imp3	99	89.560	Gasterosteus_aculeatus
ENSCSEG00000017200	imp3	99	66.120	ENSGAGG00000008163	IMP3	99	66.120	Gopherus_agassizii
ENSCSEG00000017200	imp3	99	68.681	ENSGGOG00000025122	IMP3	99	68.681	Gorilla_gorilla
ENSCSEG00000017200	imp3	99	91.758	ENSHBUG00000018453	imp3	99	91.758	Haplochromis_burtoni
ENSCSEG00000017200	imp3	99	68.681	ENSHGLG00000019824	IMP3	99	68.681	Heterocephalus_glaber_female
ENSCSEG00000017200	imp3	99	68.681	ENSHGLG00100020660	IMP3	99	68.681	Heterocephalus_glaber_male
ENSCSEG00000017200	imp3	99	90.659	ENSHCOG00000020565	imp3	99	90.659	Hippocampus_comes
ENSCSEG00000017200	imp3	99	86.264	ENSIPUG00000013142	imp3	99	86.264	Ictalurus_punctatus
ENSCSEG00000017200	imp3	99	69.231	ENSSTOG00000030143	IMP3	99	69.231	Ictidomys_tridecemlineatus
ENSCSEG00000017200	imp3	99	89.011	ENSKMAG00000001956	imp3	99	89.011	Kryptolebias_marmoratus
ENSCSEG00000017200	imp3	99	89.560	ENSLBEG00000008178	imp3	99	89.560	Labrus_bergylta
ENSCSEG00000017200	imp3	99	82.873	ENSLACG00000022148	imp3	99	82.873	Latimeria_chalumnae
ENSCSEG00000017200	imp3	99	84.615	ENSLOCG00000010237	imp3	99	84.615	Lepisosteus_oculatus
ENSCSEG00000017200	imp3	99	68.681	ENSLAFG00000004425	IMP3	99	68.681	Loxodonta_africana
ENSCSEG00000017200	imp3	99	68.681	ENSMFAG00000008867	IMP3	99	68.681	Macaca_fascicularis
ENSCSEG00000017200	imp3	99	68.681	ENSMMUG00000016103	IMP3	99	68.681	Macaca_mulatta
ENSCSEG00000017200	imp3	99	68.681	ENSMNEG00000026328	IMP3	99	68.681	Macaca_nemestrina
ENSCSEG00000017200	imp3	99	89.560	ENSMAMG00000003215	imp3	99	89.560	Mastacembelus_armatus
ENSCSEG00000017200	imp3	99	91.209	ENSMZEG00005005544	imp3	99	91.209	Maylandia_zebra
ENSCSEG00000017200	imp3	99	68.132	ENSMAUG00000010279	Imp3	99	68.132	Mesocricetus_auratus
ENSCSEG00000017200	imp3	99	68.681	ENSMICG00000044149	IMP3	99	68.681	Microcebus_murinus
ENSCSEG00000017200	imp3	99	68.681	ENSMOCG00000008647	Imp3	99	68.681	Microtus_ochrogaster
ENSCSEG00000017200	imp3	96	91.429	ENSMMOG00000018117	imp3	84	91.429	Mola_mola
ENSCSEG00000017200	imp3	99	69.780	ENSMODG00000025193	IMP3	99	69.780	Monodelphis_domestica
ENSCSEG00000017200	imp3	99	90.110	ENSMALG00000006505	imp3	99	90.110	Monopterus_albus
ENSCSEG00000017200	imp3	99	67.582	MGP_CAROLIEiJ_G0032258	Imp3	99	67.582	Mus_caroli
ENSCSEG00000017200	imp3	99	67.582	ENSMUSG00000032288	Imp3	99	67.582	Mus_musculus
ENSCSEG00000017200	imp3	99	67.582	MGP_PahariEiJ_G0015125	Imp3	99	67.582	Mus_pahari
ENSCSEG00000017200	imp3	99	67.582	MGP_SPRETEiJ_G0033398	Imp3	99	67.582	Mus_spretus
ENSCSEG00000017200	imp3	99	68.132	ENSMPUG00000020147	IMP3	99	68.132	Mustela_putorius_furo
ENSCSEG00000017200	imp3	99	68.681	ENSMLUG00000014032	IMP3	99	68.681	Myotis_lucifugus
ENSCSEG00000017200	imp3	99	67.582	ENSNGAG00000017248	Imp3	99	67.582	Nannospalax_galili
ENSCSEG00000017200	imp3	99	91.209	ENSNBRG00000004060	imp3	99	91.209	Neolamprologus_brichardi
ENSCSEG00000017200	imp3	99	69.780	ENSOPRG00000015906	-	99	69.780	Ochotona_princeps
ENSCSEG00000017200	imp3	99	69.231	ENSODEG00000020194	IMP3	99	69.231	Octodon_degus
ENSCSEG00000017200	imp3	99	91.209	ENSONIG00000010661	imp3	99	91.209	Oreochromis_niloticus
ENSCSEG00000017200	imp3	99	68.681	ENSOCUG00000004690	IMP3	99	68.681	Oryctolagus_cuniculus
ENSCSEG00000017200	imp3	99	87.293	ENSORLG00000004484	imp3	99	87.293	Oryzias_latipes
ENSCSEG00000017200	imp3	99	87.293	ENSORLG00020003771	imp3	99	87.293	Oryzias_latipes_hni
ENSCSEG00000017200	imp3	99	86.740	ENSORLG00015006933	imp3	99	86.740	Oryzias_latipes_hsok
ENSCSEG00000017200	imp3	99	88.950	ENSOMEG00000016160	imp3	99	88.950	Oryzias_melastigma
ENSCSEG00000017200	imp3	99	69.780	ENSOGAG00000004917	IMP3	99	69.780	Otolemur_garnettii
ENSCSEG00000017200	imp3	99	68.681	ENSPPAG00000009241	IMP3	99	68.681	Pan_paniscus
ENSCSEG00000017200	imp3	99	68.681	ENSPPRG00000018701	IMP3	99	68.681	Panthera_pardus
ENSCSEG00000017200	imp3	99	68.681	ENSPTRG00000052235	IMP3	99	68.681	Pan_troglodytes
ENSCSEG00000017200	imp3	99	68.681	ENSPANG00000013668	IMP3	99	68.681	Papio_anubis
ENSCSEG00000017200	imp3	99	87.363	ENSPKIG00000007169	imp3	99	87.363	Paramormyrops_kingsleyae
ENSCSEG00000017200	imp3	99	78.378	ENSPMGG00000009379	imp3	99	78.378	Periophthalmus_magnuspinnatus
ENSCSEG00000017200	imp3	99	67.582	ENSPEMG00000013003	Imp3	99	67.582	Peromyscus_maniculatus_bairdii
ENSCSEG00000017200	imp3	99	89.011	ENSPFOG00000016529	imp3	99	89.011	Poecilia_formosa
ENSCSEG00000017200	imp3	99	89.560	ENSPLAG00000013831	imp3	99	89.560	Poecilia_latipinna
ENSCSEG00000017200	imp3	99	89.011	ENSPMEG00000000797	imp3	99	89.011	Poecilia_mexicana
ENSCSEG00000017200	imp3	99	89.011	ENSPREG00000006885	imp3	99	89.011	Poecilia_reticulata
ENSCSEG00000017200	imp3	99	69.231	ENSPPYG00000006664	IMP3	99	69.231	Pongo_abelii
ENSCSEG00000017200	imp3	99	69.231	ENSPCAG00000006920	IMP3	99	69.231	Procavia_capensis
ENSCSEG00000017200	imp3	99	68.681	ENSPCOG00000012367	IMP3	99	68.681	Propithecus_coquereli
ENSCSEG00000017200	imp3	99	69.231	ENSPVAG00000010036	IMP3	99	69.231	Pteropus_vampyrus
ENSCSEG00000017200	imp3	99	91.209	ENSPNYG00000000324	imp3	99	91.209	Pundamilia_nyererei
ENSCSEG00000017200	imp3	99	88.462	ENSPNAG00000017113	imp3	99	88.462	Pygocentrus_nattereri
ENSCSEG00000017200	imp3	99	67.582	ENSRNOG00000017460	Imp3	99	67.582	Rattus_norvegicus
ENSCSEG00000017200	imp3	99	69.231	ENSRBIG00000024522	IMP3	99	69.231	Rhinopithecus_bieti
ENSCSEG00000017200	imp3	99	69.231	ENSRROG00000024157	IMP3	99	69.231	Rhinopithecus_roxellana
ENSCSEG00000017200	imp3	99	54.396	YHR148W	-	99	54.396	Saccharomyces_cerevisiae
ENSCSEG00000017200	imp3	99	58.791	ENSSBOG00000026404	-	99	58.791	Saimiri_boliviensis_boliviensis
ENSCSEG00000017200	imp3	99	68.132	ENSSBOG00000006542	-	99	68.132	Saimiri_boliviensis_boliviensis
ENSCSEG00000017200	imp3	99	66.484	ENSSHAG00000006200	IMP3	99	66.484	Sarcophilus_harrisii
ENSCSEG00000017200	imp3	99	86.813	ENSSFOG00015012483	imp3	99	86.813	Scleropages_formosus
ENSCSEG00000017200	imp3	99	89.011	ENSSMAG00000007865	imp3	99	89.011	Scophthalmus_maximus
ENSCSEG00000017200	imp3	99	90.659	ENSSDUG00000010594	imp3	99	90.659	Seriola_dumerili
ENSCSEG00000017200	imp3	99	90.659	ENSSLDG00000015587	imp3	99	90.659	Seriola_lalandi_dorsalis
ENSCSEG00000017200	imp3	99	69.231	ENSSARG00000009657	IMP3	99	69.231	Sorex_araneus
ENSCSEG00000017200	imp3	99	89.560	ENSSPAG00000002088	imp3	99	89.560	Stegastes_partitus
ENSCSEG00000017200	imp3	99	56.284	ENSTGUG00000013228	IMP3	99	57.923	Taeniopygia_guttata
ENSCSEG00000017200	imp3	100	89.071	ENSTRUG00000025783	imp3	100	89.071	Takifugu_rubripes
ENSCSEG00000017200	imp3	99	69.231	ENSUAMG00000022724	IMP3	99	69.231	Ursus_americanus
ENSCSEG00000017200	imp3	99	69.231	ENSUMAG00000003736	IMP3	99	69.231	Ursus_maritimus
ENSCSEG00000017200	imp3	99	67.033	ENSVVUG00000019589	IMP3	99	67.033	Vulpes_vulpes
ENSCSEG00000017200	imp3	96	89.714	ENSXCOG00000007392	imp3	96	89.714	Xiphophorus_couchianus
ENSCSEG00000017200	imp3	99	90.110	ENSXMAG00000023049	imp3	99	90.110	Xiphophorus_maculatus