EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000017352 (Gene tree)
Gene ID: -
Gene Symbol: swt1
Alias: si:dkeyp-11g8.2|si:dkeyp-11g8.4|wu:fb81g09
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 14914 bases
Position: chr2:5635608-5650521
Accession: 103395216
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000027154	PIN_4	PF13638.6	1.2e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000027520	-	3000	XM_008332852	ENSCSEP00000027154	762 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000017352's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000017352's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000017352	swt1	74	33.390	ENSG00000116668	SWT1	60	33.618	Homo_sapiens
ENSCSEG00000017352	swt1	96	56.505	ENSAPOG00000014897	-	77	56.505	Acanthochromis_polyacanthus
ENSCSEG00000017352	swt1	74	33.898	ENSAMEG00000013585	SWT1	61	33.898	Ailuropoda_melanoleuca
ENSCSEG00000017352	swt1	94	59.116	ENSAOCG00000013932	swt1	62	65.246	Amphiprion_ocellaris
ENSCSEG00000017352	swt1	94	58.904	ENSAPEG00000009613	-	62	65.246	Amphiprion_percula
ENSCSEG00000017352	swt1	98	58.278	ENSATEG00000018946	swt1	77	57.576	Anabas_testudineus
ENSCSEG00000017352	swt1	74	37.056	ENSAPLG00000008607	SWT1	74	37.162	Anas_platyrhynchos
ENSCSEG00000017352	swt1	79	33.649	ENSACAG00000002276	SWT1	66	33.760	Anolis_carolinensis
ENSCSEG00000017352	swt1	75	34.179	ENSANAG00000027068	SWT1	61	34.179	Aotus_nancymaae
ENSCSEG00000017352	swt1	80	57.471	ENSACLG00000009742	swt1	75	58.238	Astatotilapia_calliptera
ENSCSEG00000017352	swt1	96	39.500	ENSAMXG00000010971	swt1	57	47.069	Astyanax_mexicanus
ENSCSEG00000017352	swt1	75	34.060	ENSCJAG00000005544	SWT1	61	34.118	Callithrix_jacchus
ENSCSEG00000017352	swt1	75	34.003	ENSCAFG00000013543	SWT1	61	34.615	Canis_familiaris
ENSCSEG00000017352	swt1	75	34.003	ENSCAFG00020015648	SWT1	65	34.396	Canis_lupus_dingo
ENSCSEG00000017352	swt1	75	34.506	ENSCHIG00000023511	SWT1	95	33.499	Capra_hircus
ENSCSEG00000017352	swt1	75	33.784	ENSTSYG00000010470	SWT1	61	33.784	Carlito_syrichta
ENSCSEG00000017352	swt1	68	35.240	ENSCPOG00000014251	SWT1	63	34.312	Cavia_porcellus
ENSCSEG00000017352	swt1	75	33.615	ENSCCAG00000033926	SWT1	61	33.672	Cebus_capucinus
ENSCSEG00000017352	swt1	75	33.672	ENSCATG00000042210	SWT1	94	33.672	Cercocebus_atys
ENSCSEG00000017352	swt1	75	34.224	ENSCLAG00000013959	SWT1	63	33.611	Chinchilla_lanigera
ENSCSEG00000017352	swt1	75	33.333	ENSCSAG00000012895	SWT1	61	33.333	Chlorocebus_sabaeus
ENSCSEG00000017352	swt1	76	38.158	ENSCPBG00000015691	SWT1	63	37.829	Chrysemys_picta_bellii
ENSCSEG00000017352	swt1	75	33.277	ENSCANG00000032207	SWT1	94	33.503	Colobus_angolensis_palliatus
ENSCSEG00000017352	swt1	85	32.936	ENSCGRG00001022955	Swt1	70	33.125	Cricetulus_griseus_chok1gshd
ENSCSEG00000017352	swt1	81	33.333	ENSCGRG00000010224	Swt1	67	33.125	Cricetulus_griseus_crigri
ENSCSEG00000017352	swt1	74	45.724	ENSDARG00000094010	swt1	56	45.550	Danio_rerio
ENSCSEG00000017352	swt1	65	35.893	ENSDNOG00000005254	SWT1	59	35.893	Dasypus_novemcinctus
ENSCSEG00000017352	swt1	75	33.782	ENSDORG00000010531	Swt1	66	34.118	Dipodomys_ordii
ENSCSEG00000017352	swt1	75	32.546	ENSEASG00005005530	SWT1	65	31.872	Equus_asinus_asinus
ENSCSEG00000017352	swt1	62	47.826	ENSECAG00000012085	SWT1	59	47.826	Equus_caballus
ENSCSEG00000017352	swt1	96	44.166	ENSELUG00000020565	swt1	63	48.636	Esox_lucius
ENSCSEG00000017352	swt1	75	33.613	ENSFCAG00000011286	SWT1	62	33.613	Felis_catus
ENSCSEG00000017352	swt1	76	35.585	ENSFALG00000003206	SWT1	64	35.726	Ficedula_albicollis
ENSCSEG00000017352	swt1	75	34.506	ENSFDAG00000007569	SWT1	62	34.506	Fukomys_damarensis
ENSCSEG00000017352	swt1	90	33.607	ENSGALG00000034230	SWT1	69	36.068	Gallus_gallus
ENSCSEG00000017352	swt1	98	51.178	ENSGAFG00000007803	-	61	58.487	Gambusia_affinis
ENSCSEG00000017352	swt1	77	37.397	ENSGAGG00000025050	SWT1	95	37.241	Gopherus_agassizii
ENSCSEG00000017352	swt1	68	33.272	ENSGGOG00000041167	-	92	33.333	Gorilla_gorilla
ENSCSEG00000017352	swt1	84	57.566	ENSHBUG00000006188	swt1	76	58.295	Haplochromis_burtoni
ENSCSEG00000017352	swt1	85	32.999	ENSHGLG00000006542	SWT1	73	33.133	Heterocephalus_glaber_female
ENSCSEG00000017352	swt1	85	32.855	ENSHGLG00100014408	SWT1	71	33.434	Heterocephalus_glaber_male
ENSCSEG00000017352	swt1	75	44.218	ENSIPUG00000009113	-	58	43.707	Ictalurus_punctatus
ENSCSEG00000017352	swt1	75	34.622	ENSSTOG00000010356	SWT1	62	34.622	Ictidomys_tridecemlineatus
ENSCSEG00000017352	swt1	75	34.628	ENSJJAG00000015927	Swt1	64	34.628	Jaculus_jaculus
ENSCSEG00000017352	swt1	96	51.900	ENSKMAG00000012533	swt1	63	59.574	Kryptolebias_marmoratus
ENSCSEG00000017352	swt1	96	55.378	ENSLBEG00000020663	-	75	55.040	Labrus_bergylta
ENSCSEG00000017352	swt1	85	36.222	ENSLACG00000009194	SWT1	90	37.220	Latimeria_chalumnae
ENSCSEG00000017352	swt1	74	41.356	ENSLOCG00000001749	swt1	99	41.021	Lepisosteus_oculatus
ENSCSEG00000017352	swt1	75	33.556	ENSLAFG00000004346	-	95	33.779	Loxodonta_africana
ENSCSEG00000017352	swt1	75	33.558	ENSMFAG00000031793	SWT1	94	33.727	Macaca_fascicularis
ENSCSEG00000017352	swt1	73	33.048	ENSMMUG00000013882	SWT1	93	33.219	Macaca_mulatta
ENSCSEG00000017352	swt1	75	33.895	ENSMNEG00000035502	SWT1	94	33.784	Macaca_nemestrina
ENSCSEG00000017352	swt1	79	33.387	ENSMLEG00000038692	SWT1	94	33.503	Mandrillus_leucophaeus
ENSCSEG00000017352	swt1	84	57.722	ENSMZEG00005018489	swt1	76	58.450	Maylandia_zebra
ENSCSEG00000017352	swt1	73	37.842	ENSMGAG00000000973	SWT1	93	37.075	Meleagris_gallopavo
ENSCSEG00000017352	swt1	75	32.586	ENSMAUG00000007996	Swt1	58	32.241	Mesocricetus_auratus
ENSCSEG00000017352	swt1	75	33.956	ENSMICG00000014975	SWT1	61	34.184	Microcebus_murinus
ENSCSEG00000017352	swt1	75	34.184	ENSMOCG00000009776	Swt1	61	34.184	Microtus_ochrogaster
ENSCSEG00000017352	swt1	74	34.465	ENSMODG00000007472	SWT1	60	34.583	Monodelphis_domestica
ENSCSEG00000017352	swt1	97	57.656	ENSMALG00000019308	swt1	77	57.656	Monopterus_albus
ENSCSEG00000017352	swt1	81	34.748	MGP_CAROLIEiJ_G0014692	Swt1	88	41.593	Mus_caroli
ENSCSEG00000017352	swt1	81	33.962	ENSMUSG00000052748	Swt1	87	40.708	Mus_musculus
ENSCSEG00000017352	swt1	74	34.932	MGP_PahariEiJ_G0027928	Swt1	65	46.341	Mus_pahari
ENSCSEG00000017352	swt1	81	34.591	MGP_SPRETEiJ_G0015499	Swt1	88	41.150	Mus_spretus
ENSCSEG00000017352	swt1	75	33.502	ENSMPUG00000011913	SWT1	61	33.844	Mustela_putorius_furo
ENSCSEG00000017352	swt1	78	34.150	ENSMLUG00000001142	SWT1	63	33.279	Myotis_lucifugus
ENSCSEG00000017352	swt1	74	34.983	ENSNGAG00000021080	Swt1	60	34.642	Nannospalax_galili
ENSCSEG00000017352	swt1	74	33.276	ENSNLEG00000018031	SWT1	60	33.505	Nomascus_leucogenys
ENSCSEG00000017352	swt1	75	60.034	ENSONIG00000009994	swt1	97	55.282	Oreochromis_niloticus
ENSCSEG00000017352	swt1	75	34.060	ENSOANG00000001013	-	71	34.060	Ornithorhynchus_anatinus
ENSCSEG00000017352	swt1	88	32.394	ENSOCUG00000004901	SWT1	62	34.007	Oryctolagus_cuniculus
ENSCSEG00000017352	swt1	92	52.566	ENSORLG00000009682	swt1	64	57.166	Oryzias_latipes
ENSCSEG00000017352	swt1	92	53.186	ENSORLG00020011654	swt1	64	57.556	Oryzias_latipes_hni
ENSCSEG00000017352	swt1	92	52.566	ENSORLG00015007734	swt1	64	56.844	Oryzias_latipes_hsok
ENSCSEG00000017352	swt1	86	54.370	ENSOMEG00000006607	swt1	63	55.873	Oryzias_melastigma
ENSCSEG00000017352	swt1	75	33.333	ENSOGAG00000016195	SWT1	61	34.014	Otolemur_garnettii
ENSCSEG00000017352	swt1	75	34.338	ENSOARG00000004156	SWT1	60	33.890	Ovis_aries
ENSCSEG00000017352	swt1	74	33.390	ENSPPAG00000021400	SWT1	60	33.618	Pan_paniscus
ENSCSEG00000017352	swt1	75	33.613	ENSPPRG00000023754	SWT1	62	33.613	Panthera_pardus
ENSCSEG00000017352	swt1	75	33.613	ENSPTIG00000021889	SWT1	62	33.613	Panthera_tigris_altaica
ENSCSEG00000017352	swt1	78	32.846	ENSPTRG00000001777	SWT1	60	33.618	Pan_troglodytes
ENSCSEG00000017352	swt1	75	33.503	ENSPANG00000005099	SWT1	94	33.729	Papio_anubis
ENSCSEG00000017352	swt1	78	44.590	ENSPKIG00000005979	swt1	61	44.262	Paramormyrops_kingsleyae
ENSCSEG00000017352	swt1	75	37.248	ENSPSIG00000008961	SWT1	61	37.416	Pelodiscus_sinensis
ENSCSEG00000017352	swt1	81	33.019	ENSPEMG00000008208	Swt1	66	33.019	Peromyscus_maniculatus_bairdii
ENSCSEG00000017352	swt1	75	33.498	ENSPCIG00000002443	SWT1	61	33.662	Phascolarctos_cinereus
ENSCSEG00000017352	swt1	86	54.867	ENSPFOG00000010988	-	70	57.023	Poecilia_formosa
ENSCSEG00000017352	swt1	78	59.046	ENSPLAG00000022908	-	62	59.046	Poecilia_latipinna
ENSCSEG00000017352	swt1	86	54.748	ENSPMEG00000006943	-	62	58.775	Poecilia_mexicana
ENSCSEG00000017352	swt1	74	33.733	ENSPPYG00000000415	SWT1	60	33.904	Pongo_abelii
ENSCSEG00000017352	swt1	75	31.197	ENSPVAG00000005968	SWT1	67	30.878	Pteropus_vampyrus
ENSCSEG00000017352	swt1	84	57.829	ENSPNYG00000012934	swt1	75	59.119	Pundamilia_nyererei
ENSCSEG00000017352	swt1	90	43.000	ENSPNAG00000017795	swt1	59	46.812	Pygocentrus_nattereri
ENSCSEG00000017352	swt1	85	34.074	ENSRNOG00000032258	Swt1	69	34.375	Rattus_norvegicus
ENSCSEG00000017352	swt1	75	33.333	ENSRBIG00000040630	SWT1	94	33.560	Rhinopithecus_bieti
ENSCSEG00000017352	swt1	75	33.446	ENSSBOG00000028825	SWT1	61	33.959	Saimiri_boliviensis_boliviensis
ENSCSEG00000017352	swt1	75	34.281	ENSSHAG00000009241	SWT1	61	34.281	Sarcophilus_harrisii
ENSCSEG00000017352	swt1	76	46.496	ENSSFOG00015004895	swt1	57	46.496	Scleropages_formosus
ENSCSEG00000017352	swt1	98	59.848	ENSSMAG00000020761	-	64	59.848	Scophthalmus_maximus
ENSCSEG00000017352	swt1	98	64.550	ENSSDUG00000012345	swt1	78	64.550	Seriola_dumerili
ENSCSEG00000017352	swt1	98	64.201	ENSSLDG00000003821	swt1	78	64.201	Seriola_lalandi_dorsalis
ENSCSEG00000017352	swt1	87	35.345	ENSSPUG00000003899	SWT1	62	48.837	Sphenodon_punctatus
ENSCSEG00000017352	swt1	96	57.441	ENSSPAG00000001030	swt1	60	66.839	Stegastes_partitus
ENSCSEG00000017352	swt1	75	34.622	ENSSSCG00000015569	SWT1	64	34.118	Sus_scrofa
ENSCSEG00000017352	swt1	74	36.410	ENSTGUG00000003718	-	98	36.068	Taeniopygia_guttata
ENSCSEG00000017352	swt1	88	53.630	ENSTRUG00000006420	swt1	65	56.645	Takifugu_rubripes
ENSCSEG00000017352	swt1	75	33.558	ENSTTRG00000005914	SWT1	61	33.556	Tursiops_truncatus
ENSCSEG00000017352	swt1	75	33.333	ENSUAMG00000020937	SWT1	67	33.333	Ursus_americanus
ENSCSEG00000017352	swt1	75	33.333	ENSUMAG00000021918	SWT1	62	33.507	Ursus_maritimus
ENSCSEG00000017352	swt1	71	33.094	ENSVPAG00000011855	SWT1	53	41.772	Vicugna_pacos
ENSCSEG00000017352	swt1	75	34.003	ENSVVUG00000009182	SWT1	64	34.396	Vulpes_vulpes
ENSCSEG00000017352	swt1	98	52.026	ENSXMAG00000023472	-	62	59.008	Xiphophorus_maculatus