EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000017388 (Gene tree)
Gene ID: 103396116
Gene Symbol: -
Alias: -
Full Name: nucleolin-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 5682 bases
Position: chr20:4369336-4375017
Accession: 103396116
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000027204	RRM_1	PF00076.22	1.6e-43	1	4
ENSCSEP00000027204	RRM_1	PF00076.22	1.6e-43	2	4
ENSCSEP00000027204	RRM_1	PF00076.22	1.6e-43	3	4
ENSCSEP00000027204	RRM_1	PF00076.22	1.6e-43	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000027570	-	3368	XM_008334080	ENSCSEP00000027204	529 (aa)	XP_008332302	UPI000495EC7B

Gene Model

Click here to download ENSCSEG00000017388's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000017388's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000017388	-	72	42.746	ENSCSEG00000015089	ncl	70	38.742

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000017388	-	76	48.929	ENSACIG00000021941	-	94	48.929	Amphilophus_citrinellus
ENSCSEG00000017388	-	74	42.994	ENSACLG00000009613	-	94	45.547	Astatotilapia_calliptera
ENSCSEG00000017388	-	83	47.392	ENSFHEG00000017265	-	92	47.717	Fundulus_heteroclitus
ENSCSEG00000017388	-	75	38.660	ENSGMOG00000017831	-	98	38.168	Gadus_morhua
ENSCSEG00000017388	-	76	47.666	ENSGAFG00000018408	-	82	47.458	Gambusia_affinis
ENSCSEG00000017388	-	77	42.038	ENSHBUG00000006683	-	98	44.363	Haplochromis_burtoni
ENSCSEG00000017388	-	76	47.512	ENSHCOG00000020361	-	94	47.512	Hippocampus_comes
ENSCSEG00000017388	-	79	54.197	ENSKMAG00000003154	-	88	54.177	Kryptolebias_marmoratus
ENSCSEG00000017388	-	77	42.675	ENSMZEG00005005300	-	98	44.853	Maylandia_zebra
ENSCSEG00000017388	-	79	52.029	ENSMMOG00000018095	-	96	51.790	Mola_mola
ENSCSEG00000017388	-	88	44.507	ENSMALG00000006207	-	92	43.944	Monopterus_albus
ENSCSEG00000017388	-	74	45.340	ENSPMGG00000013705	-	94	46.096	Periophthalmus_magnuspinnatus
ENSCSEG00000017388	-	73	49.257	ENSPFOG00000016767	-	89	48.515	Poecilia_formosa
ENSCSEG00000017388	-	76	48.905	ENSPLAG00000000597	-	81	48.905	Poecilia_latipinna
ENSCSEG00000017388	-	76	48.900	ENSPMEG00000004046	-	82	48.900	Poecilia_mexicana
ENSCSEG00000017388	-	73	48.878	ENSPREG00000007170	-	87	47.529	Poecilia_reticulata
ENSCSEG00000017388	-	76	44.695	ENSPNYG00000000391	-	98	46.420	Pundamilia_nyererei
ENSCSEG00000017388	-	73	50.900	ENSTRUG00000023880	-	79	50.643	Takifugu_rubripes
ENSCSEG00000017388	-	79	46.572	ENSXMAG00000004403	-	84	47.170	Xiphophorus_maculatus