EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000017460 (Gene tree)
Gene ID: -
Gene Symbol: rc3h2
Alias: si:ch211-243g18.1
Full Name: roquin-2
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 51322 bases
Position: chr14:2627388-2678709
Accession: 103389135
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000027338	zf-CCCH	PF00642.24	1.4e-06	1	1
ENSCSEP00000027326	zf-CCCH	PF00642.24	1.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000027693	-	4358	-	ENSCSEP00000027326	1159 (aa)	-	-
ENSCSET00000027705	-	4148	XM_008324423	ENSCSEP00000027338	1089 (aa)	XP_008322645	-

Gene Model

Click here to download ENSCSEG00000017460's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000017460's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000017460	rc3h2	96	55.526	ENSG00000056586	RC3H2	95	86.062	Homo_sapiens
ENSCSEG00000017460	rc3h2	100	83.717	ENSAPOG00000002117	rc3h2	100	83.973	Acanthochromis_polyacanthus
ENSCSEG00000017460	rc3h2	96	55.880	ENSAMEG00000006498	RC3H2	90	55.212	Ailuropoda_melanoleuca
ENSCSEG00000017460	rc3h2	100	83.618	ENSAPEG00000007757	rc3h2	100	83.874	Amphiprion_percula
ENSCSEG00000017460	rc3h2	100	82.097	ENSATEG00000019414	rc3h2	100	82.182	Anabas_testudineus
ENSCSEG00000017460	rc3h2	96	57.003	ENSAPLG00000013920	RC3H2	90	56.572	Anas_platyrhynchos
ENSCSEG00000017460	rc3h2	96	55.526	ENSANAG00000030862	RC3H2	95	86.062	Aotus_nancymaae
ENSCSEG00000017460	rc3h2	100	80.525	ENSACLG00000023136	rc3h2	100	80.356	Astatotilapia_calliptera
ENSCSEG00000017460	rc3h2	94	65.024	ENSAMXG00000006778	rc3h2	100	65.912	Astyanax_mexicanus
ENSCSEG00000017460	rc3h2	96	55.674	ENSBTAG00000023867	RC3H2	90	55.359	Bos_taurus
ENSCSEG00000017460	rc3h2	96	55.526	ENSCJAG00000020050	RC3H2	95	86.062	Callithrix_jacchus
ENSCSEG00000017460	rc3h2	96	55.890	ENSCAFG00020015288	RC3H2	95	86.062	Canis_lupus_dingo
ENSCSEG00000017460	rc3h2	96	55.733	ENSCHIG00000019319	RC3H2	90	55.417	Capra_hircus
ENSCSEG00000017460	rc3h2	90	49.663	ENSCAPG00000017086	RC3H2	94	48.656	Cavia_aperea
ENSCSEG00000017460	rc3h2	96	56.117	ENSCPOG00000008511	RC3H2	90	55.713	Cavia_porcellus
ENSCSEG00000017460	rc3h2	96	56.156	ENSCCAG00000001404	RC3H2	95	86.062	Cebus_capucinus
ENSCSEG00000017460	rc3h2	96	55.526	ENSCATG00000036655	RC3H2	95	86.062	Cercocebus_atys
ENSCSEG00000017460	rc3h2	96	55.802	ENSCLAG00000013261	RC3H2	90	55.398	Chinchilla_lanigera
ENSCSEG00000017460	rc3h2	85	52.695	ENSCSAG00000013416	RC3H2	89	52.243	Chlorocebus_sabaeus
ENSCSEG00000017460	rc3h2	96	57.054	ENSCPBG00000009811	RC3H2	90	56.646	Chrysemys_picta_bellii
ENSCSEG00000017460	rc3h2	96	55.526	ENSCANG00000043140	RC3H2	95	86.062	Colobus_angolensis_palliatus
ENSCSEG00000017460	rc3h2	98	54.777	ENSCGRG00001010006	Rc3h2	90	54.787	Cricetulus_griseus_chok1gshd
ENSCSEG00000017460	rc3h2	74	61.366	ENSCGRG00000009255	Rc3h2	79	59.502	Cricetulus_griseus_crigri
ENSCSEG00000017460	rc3h2	99	75.235	ENSCVAG00000012202	rc3h2	100	75.128	Cyprinodon_variegatus
ENSCSEG00000017460	rc3h2	100	60.585	ENSDARG00000063050	rc3h2	100	60.660	Danio_rerio
ENSCSEG00000017460	rc3h2	96	55.802	ENSDNOG00000014557	RC3H2	90	55.487	Dasypus_novemcinctus
ENSCSEG00000017460	rc3h2	96	56.145	ENSDORG00000006398	Rc3h2	90	55.742	Dipodomys_ordii
ENSCSEG00000017460	rc3h2	96	55.566	ENSEASG00005020897	RC3H2	94	81.416	Equus_asinus_asinus
ENSCSEG00000017460	rc3h2	96	55.890	ENSECAG00000022176	RC3H2	90	55.575	Equus_caballus
ENSCSEG00000017460	rc3h2	100	69.074	ENSELUG00000006105	rc3h2	100	69.074	Esox_lucius
ENSCSEG00000017460	rc3h2	96	55.979	ENSFCAG00000007375	RC3H2	90	55.664	Felis_catus
ENSCSEG00000017460	rc3h2	96	57.003	ENSFALG00000002011	RC3H2	90	56.595	Ficedula_albicollis
ENSCSEG00000017460	rc3h2	96	55.940	ENSFDAG00000012477	RC3H2	90	55.536	Fukomys_damarensis
ENSCSEG00000017460	rc3h2	99	76.536	ENSFHEG00000012272	rc3h2	100	76.089	Fundulus_heteroclitus
ENSCSEG00000017460	rc3h2	73	66.338	ENSGMOG00000016709	-	99	66.831	Gadus_morhua
ENSCSEG00000017460	rc3h2	96	56.864	ENSGALG00000001253	RC3H2	90	56.549	Gallus_gallus
ENSCSEG00000017460	rc3h2	97	78.146	ENSGAFG00000007679	rc3h2	100	76.628	Gambusia_affinis
ENSCSEG00000017460	rc3h2	79	79.725	ENSGACG00000017369	rc3h2	100	95.928	Gasterosteus_aculeatus
ENSCSEG00000017460	rc3h2	96	56.812	ENSGAGG00000018295	RC3H2	98	56.406	Gopherus_agassizii
ENSCSEG00000017460	rc3h2	96	55.526	ENSGGOG00000017062	RC3H2	95	86.062	Gorilla_gorilla
ENSCSEG00000017460	rc3h2	100	81.266	ENSHBUG00000003976	rc3h2	100	81.095	Haplochromis_burtoni
ENSCSEG00000017460	rc3h2	96	55.851	ENSHGLG00100018015	RC3H2	90	55.447	Heterocephalus_glaber_male
ENSCSEG00000017460	rc3h2	100	73.012	ENSHCOG00000003006	rc3h2	100	73.012	Hippocampus_comes
ENSCSEG00000017460	rc3h2	100	57.534	ENSIPUG00000021433	rc3h2	100	57.423	Ictalurus_punctatus
ENSCSEG00000017460	rc3h2	96	55.940	ENSSTOG00000010655	RC3H2	90	55.536	Ictidomys_tridecemlineatus
ENSCSEG00000017460	rc3h2	96	56.289	ENSJJAG00000022376	Rc3h2	90	55.793	Jaculus_jaculus
ENSCSEG00000017460	rc3h2	100	77.645	ENSKMAG00000010936	rc3h2	100	77.560	Kryptolebias_marmoratus
ENSCSEG00000017460	rc3h2	97	58.618	ENSLOCG00000002894	rc3h2	100	55.296	Lepisosteus_oculatus
ENSCSEG00000017460	rc3h2	96	56.071	ENSLAFG00000003521	RC3H2	90	55.754	Loxodonta_africana
ENSCSEG00000017460	rc3h2	87	86.425	ENSMFAG00000035621	RC3H2	95	86.062	Macaca_fascicularis
ENSCSEG00000017460	rc3h2	96	55.979	ENSMMUG00000021134	RC3H2	95	86.062	Macaca_mulatta
ENSCSEG00000017460	rc3h2	96	55.526	ENSMNEG00000031599	RC3H2	95	83.850	Macaca_nemestrina
ENSCSEG00000017460	rc3h2	96	55.979	ENSMLEG00000033809	RC3H2	95	86.062	Mandrillus_leucophaeus
ENSCSEG00000017460	rc3h2	100	81.266	ENSMZEG00005017019	rc3h2	100	81.095	Maylandia_zebra
ENSCSEG00000017460	rc3h2	96	56.877	ENSMGAG00000007984	RC3H2	90	56.472	Meleagris_gallopavo
ENSCSEG00000017460	rc3h2	78	61.175	ENSMAUG00000003117	Rc3h2	85	60.289	Mesocricetus_auratus
ENSCSEG00000017460	rc3h2	96	55.979	ENSMICG00000003227	RC3H2	95	85.841	Microcebus_murinus
ENSCSEG00000017460	rc3h2	96	55.644	ENSMOCG00000009592	Rc3h2	90	55.240	Microtus_ochrogaster
ENSCSEG00000017460	rc3h2	89	96.256	ENSMMOG00000021305	rc3h2	98	96.256	Mola_mola
ENSCSEG00000017460	rc3h2	96	56.637	ENSMODG00000019725	RC3H2	78	54.623	Monodelphis_domestica
ENSCSEG00000017460	rc3h2	96	56.947	MGP_CAROLIEiJ_G0023516	Rc3h2	95	86.283	Mus_caroli
ENSCSEG00000017460	rc3h2	96	55.961	ENSMUSG00000075376	Rc3h2	95	86.283	Mus_musculus
ENSCSEG00000017460	rc3h2	96	55.893	MGP_PahariEiJ_G0024969	Rc3h2	95	86.283	Mus_pahari
ENSCSEG00000017460	rc3h2	96	55.804	MGP_SPRETEiJ_G0024436	Rc3h2	95	86.283	Mus_spretus
ENSCSEG00000017460	rc3h2	96	56.067	ENSMPUG00000014141	RC3H2	90	55.664	Mustela_putorius_furo
ENSCSEG00000017460	rc3h2	96	56.256	ENSMLUG00000013992	RC3H2	90	55.851	Myotis_lucifugus
ENSCSEG00000017460	rc3h2	100	81.437	ENSNBRG00000009276	rc3h2	100	81.266	Neolamprologus_brichardi
ENSCSEG00000017460	rc3h2	96	54.642	ENSNLEG00000017204	RC3H2	95	86.062	Nomascus_leucogenys
ENSCSEG00000017460	rc3h2	56	86.957	ENSMEUG00000001299	-	55	86.957	Notamacropus_eugenii
ENSCSEG00000017460	rc3h2	71	56.335	ENSOPRG00000000135	RC3H2	67	69.466	Ochotona_princeps
ENSCSEG00000017460	rc3h2	100	80.541	ENSONIG00000003945	rc3h2	100	80.541	Oreochromis_niloticus
ENSCSEG00000017460	rc3h2	96	56.061	ENSOANG00000008194	RC3H2	100	54.969	Ornithorhynchus_anatinus
ENSCSEG00000017460	rc3h2	96	55.940	ENSOCUG00000008804	RC3H2	90	55.536	Oryctolagus_cuniculus
ENSCSEG00000017460	rc3h2	100	77.455	ENSORLG00000010018	rc3h2	100	77.455	Oryzias_latipes
ENSCSEG00000017460	rc3h2	100	77.370	ENSORLG00020013257	rc3h2	100	77.370	Oryzias_latipes_hni
ENSCSEG00000017460	rc3h2	100	77.455	ENSORLG00015001525	rc3h2	100	77.455	Oryzias_latipes_hsok
ENSCSEG00000017460	rc3h2	100	77.901	ENSOMEG00000023540	rc3h2	100	77.901	Oryzias_melastigma
ENSCSEG00000017460	rc3h2	96	55.851	ENSOGAG00000010678	RC3H2	91	54.856	Otolemur_garnettii
ENSCSEG00000017460	rc3h2	96	55.634	ENSOARG00000013965	RC3H2	90	55.319	Ovis_aries
ENSCSEG00000017460	rc3h2	96	55.526	ENSPPAG00000036013	RC3H2	95	86.062	Pan_paniscus
ENSCSEG00000017460	rc3h2	96	55.880	ENSPPRG00000008698	RC3H2	92	57.955	Panthera_pardus
ENSCSEG00000017460	rc3h2	96	55.880	ENSPTIG00000014257	RC3H2	92	57.955	Panthera_tigris_altaica
ENSCSEG00000017460	rc3h2	96	55.526	ENSPTRG00000021339	RC3H2	95	86.062	Pan_troglodytes
ENSCSEG00000017460	rc3h2	96	54.023	ENSPANG00000025840	RC3H2	94	82.301	Papio_anubis
ENSCSEG00000017460	rc3h2	97	66.478	ENSPKIG00000021910	rc3h2	96	63.419	Paramormyrops_kingsleyae
ENSCSEG00000017460	rc3h2	96	56.584	ENSPSIG00000005393	RC3H2	90	56.089	Pelodiscus_sinensis
ENSCSEG00000017460	rc3h2	86	91.593	ENSPMGG00000023963	rc3h2	94	93.905	Periophthalmus_magnuspinnatus
ENSCSEG00000017460	rc3h2	96	55.595	ENSPEMG00000023441	Rc3h2	90	55.191	Peromyscus_maniculatus_bairdii
ENSCSEG00000017460	rc3h2	87	86.652	ENSPCIG00000025559	RC3H2	89	86.652	Phascolarctos_cinereus
ENSCSEG00000017460	rc3h2	100	74.614	ENSPFOG00000019699	rc3h2	100	75.310	Poecilia_formosa
ENSCSEG00000017460	rc3h2	97	69.063	ENSPLAG00000005799	rc3h2	100	67.213	Poecilia_latipinna
ENSCSEG00000017460	rc3h2	100	75.129	ENSPMEG00000014187	rc3h2	97	76.309	Poecilia_mexicana
ENSCSEG00000017460	rc3h2	97	77.956	ENSPREG00000008979	rc3h2	100	75.493	Poecilia_reticulata
ENSCSEG00000017460	rc3h2	82	74.308	ENSPCAG00000010154	RC3H2	76	74.308	Procavia_capensis
ENSCSEG00000017460	rc3h2	100	80.372	ENSPNYG00000012063	rc3h2	100	80.203	Pundamilia_nyererei
ENSCSEG00000017460	rc3h2	100	61.709	ENSPNAG00000017502	rc3h2	100	61.709	Pygocentrus_nattereri
ENSCSEG00000017460	rc3h2	96	55.940	ENSRNOG00000009196	Rc3h2	94	54.943	Rattus_norvegicus
ENSCSEG00000017460	rc3h2	96	56.067	ENSRBIG00000032579	RC3H2	95	86.062	Rhinopithecus_bieti
ENSCSEG00000017460	rc3h2	96	55.979	ENSRROG00000043784	RC3H2	95	86.062	Rhinopithecus_roxellana
ENSCSEG00000017460	rc3h2	96	55.703	ENSSBOG00000029100	RC3H2	95	86.062	Saimiri_boliviensis_boliviensis
ENSCSEG00000017460	rc3h2	96	56.537	ENSSHAG00000007498	RC3H2	90	55.869	Sarcophilus_harrisii
ENSCSEG00000017460	rc3h2	100	84.215	ENSSMAG00000020048	rc3h2	100	84.300	Scophthalmus_maximus
ENSCSEG00000017460	rc3h2	100	85.226	ENSSDUG00000016022	rc3h2	100	85.312	Seriola_dumerili
ENSCSEG00000017460	rc3h2	100	85.141	ENSSLDG00000016070	rc3h2	100	85.141	Seriola_lalandi_dorsalis
ENSCSEG00000017460	rc3h2	96	56.018	ENSSARG00000012329	RC3H2	90	55.703	Sorex_araneus
ENSCSEG00000017460	rc3h2	96	57.168	ENSSPUG00000001457	RC3H2	90	56.676	Sphenodon_punctatus
ENSCSEG00000017460	rc3h2	100	84.556	ENSSPAG00000005233	rc3h2	100	84.727	Stegastes_partitus
ENSCSEG00000017460	rc3h2	96	55.752	ENSSSCG00000005575	RC3H2	93	85.841	Sus_scrofa
ENSCSEG00000017460	rc3h2	96	56.798	ENSTGUG00000006889	-	90	56.390	Taeniopygia_guttata
ENSCSEG00000017460	rc3h2	90	72.472	ENSTNIG00000004942	rc3h2	98	72.154	Tetraodon_nigroviridis
ENSCSEG00000017460	rc3h2	74	61.775	ENSTBEG00000009622	RC3H2	79	61.584	Tupaia_belangeri
ENSCSEG00000017460	rc3h2	90	66.021	ENSTTRG00000016954	RC3H2	84	65.179	Tursiops_truncatus
ENSCSEG00000017460	rc3h2	96	55.979	ENSUAMG00000015355	RC3H2	90	55.398	Ursus_americanus
ENSCSEG00000017460	rc3h2	96	55.979	ENSUMAG00000003161	RC3H2	95	86.062	Ursus_maritimus
ENSCSEG00000017460	rc3h2	96	55.575	ENSVPAG00000005994	RC3H2	90	54.907	Vicugna_pacos
ENSCSEG00000017460	rc3h2	96	55.890	ENSVVUG00000009519	RC3H2	93	55.575	Vulpes_vulpes
ENSCSEG00000017460	rc3h2	99	68.705	ENSXCOG00000005002	rc3h2	94	95.238	Xiphophorus_couchianus
ENSCSEG00000017460	rc3h2	97	78.430	ENSXMAG00000001724	rc3h2	100	75.835	Xiphophorus_maculatus