EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000017499 (Gene tree)
Gene ID: 103383084
Gene Symbol: apex1
Alias: hm:zehn1532|wu:fc13d11|zap1|zgc:66204
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 1544 bases
Position: chr8:29447325-29448868
Accession: 103383084
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000027393	Exo_endo_phos	PF03372.23	5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000027761	-	936	XM_008316091	ENSCSEP00000027393	311 (aa)	XP_008314313	-

Gene Model

Click here to download ENSCSEG00000017499's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000017499's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000017499	apex1	99	65.094	ENSG00000100823	APEX1	99	65.094	Homo_sapiens
ENSCSEG00000017499	apex1	99	87.097	ENSAPOG00000017002	apex1	100	87.097	Acanthochromis_polyacanthus
ENSCSEG00000017499	apex1	99	64.151	ENSAMEG00000005418	APEX1	99	64.465	Ailuropoda_melanoleuca
ENSCSEG00000017499	apex1	89	88.087	ENSACIG00000010653	apex1	98	87.285	Amphilophus_citrinellus
ENSCSEG00000017499	apex1	99	87.742	ENSAOCG00000009649	apex1	100	87.742	Amphiprion_ocellaris
ENSCSEG00000017499	apex1	99	88.065	ENSAPEG00000021453	apex1	100	88.065	Amphiprion_percula
ENSCSEG00000017499	apex1	99	87.055	ENSATEG00000002883	apex1	97	87.055	Anabas_testudineus
ENSCSEG00000017499	apex1	99	65.397	ENSACAG00000008099	APEX1	99	65.714	Anolis_carolinensis
ENSCSEG00000017499	apex1	80	30.592	ENSACAG00000011201	APEX2	59	30.233	Anolis_carolinensis
ENSCSEG00000017499	apex1	99	65.094	ENSANAG00000030117	APEX1	99	64.984	Aotus_nancymaae
ENSCSEG00000017499	apex1	99	88.710	ENSACLG00000018441	apex1	100	88.710	Astatotilapia_calliptera
ENSCSEG00000017499	apex1	99	84.194	ENSAMXG00000034699	apex1	99	84.194	Astyanax_mexicanus
ENSCSEG00000017499	apex1	99	63.208	ENSBTAG00000002745	APEX1	99	63.291	Bos_taurus
ENSCSEG00000017499	apex1	98	42.810	WBGene00001372	exo-3	98	42.810	Caenorhabditis_elegans
ENSCSEG00000017499	apex1	99	65.094	ENSCJAG00000009726	APEX1	99	65.094	Callithrix_jacchus
ENSCSEG00000017499	apex1	99	64.465	ENSCAFG00000032033	APEX1	99	65.094	Canis_familiaris
ENSCSEG00000017499	apex1	99	64.465	ENSCAFG00020014377	-	99	65.094	Canis_lupus_dingo
ENSCSEG00000017499	apex1	53	59.302	ENSCAFG00020023002	-	94	60.465	Canis_lupus_dingo
ENSCSEG00000017499	apex1	99	63.208	ENSCHIG00000007298	-	99	63.291	Capra_hircus
ENSCSEG00000017499	apex1	88	54.545	ENSCHIG00000014537	-	90	52.297	Capra_hircus
ENSCSEG00000017499	apex1	99	63.722	ENSTSYG00000034813	APEX1	99	63.722	Carlito_syrichta
ENSCSEG00000017499	apex1	86	61.818	ENSCAPG00000016235	APEX1	97	61.818	Cavia_aperea
ENSCSEG00000017499	apex1	99	64.038	ENSCPOG00000030909	APEX1	99	64.038	Cavia_porcellus
ENSCSEG00000017499	apex1	99	56.918	ENSCCAG00000031931	-	99	56.467	Cebus_capucinus
ENSCSEG00000017499	apex1	99	65.094	ENSCCAG00000033056	-	99	65.094	Cebus_capucinus
ENSCSEG00000017499	apex1	99	64.780	ENSCATG00000015580	APEX1	99	64.780	Cercocebus_atys
ENSCSEG00000017499	apex1	99	64.353	ENSCLAG00000001002	APEX1	99	64.353	Chinchilla_lanigera
ENSCSEG00000017499	apex1	99	65.094	ENSCSAG00000016685	-	99	65.094	Chlorocebus_sabaeus
ENSCSEG00000017499	apex1	99	65.094	ENSCSAG00000016670	-	99	65.094	Chlorocebus_sabaeus
ENSCSEG00000017499	apex1	99	68.038	ENSCPBG00000009567	APEX1	99	68.354	Chrysemys_picta_bellii
ENSCSEG00000017499	apex1	98	54.575	ENSCING00000008137	-	93	54.575	Ciona_intestinalis
ENSCSEG00000017499	apex1	86	50.746	ENSCSAVG00000007144	-	100	52.713	Ciona_savignyi
ENSCSEG00000017499	apex1	99	65.094	ENSCANG00000030726	APEX1	99	65.094	Colobus_angolensis_palliatus
ENSCSEG00000017499	apex1	99	63.407	ENSCGRG00001017046	Apex1	99	63.407	Cricetulus_griseus_chok1gshd
ENSCSEG00000017499	apex1	99	63.407	ENSCGRG00000008984	Apex1	99	63.407	Cricetulus_griseus_crigri
ENSCSEG00000017499	apex1	99	88.387	ENSCVAG00000022075	apex1	100	88.387	Cyprinodon_variegatus
ENSCSEG00000017499	apex1	99	81.230	ENSDARG00000045843	apex1	99	81.230	Danio_rerio
ENSCSEG00000017499	apex1	99	61.006	ENSDNOG00000042234	APEX1	94	61.514	Dasypus_novemcinctus
ENSCSEG00000017499	apex1	99	63.924	ENSDORG00000001616	Apex1	99	63.924	Dipodomys_ordii
ENSCSEG00000017499	apex1	99	64.151	ENSETEG00000004855	-	99	64.465	Echinops_telfairi
ENSCSEG00000017499	apex1	76	59.664	ENSEBUG00000000622	-	92	59.664	Eptatretus_burgeri
ENSCSEG00000017499	apex1	99	65.300	ENSEASG00005017489	APEX1	73	65.300	Equus_asinus_asinus
ENSCSEG00000017499	apex1	99	65.300	ENSECAG00000022325	APEX1	81	65.300	Equus_caballus
ENSCSEG00000017499	apex1	86	68.773	ENSEEUG00000012569	APEX1	96	68.231	Erinaceus_europaeus
ENSCSEG00000017499	apex1	99	81.290	ENSELUG00000021706	apex1	99	81.613	Esox_lucius
ENSCSEG00000017499	apex1	99	65.409	ENSFCAG00000030869	APEX1	99	65.409	Felis_catus
ENSCSEG00000017499	apex1	99	64.669	ENSFDAG00000006120	APEX1	99	64.669	Fukomys_damarensis
ENSCSEG00000017499	apex1	99	86.129	ENSFHEG00000009031	apex1	83	86.129	Fundulus_heteroclitus
ENSCSEG00000017499	apex1	99	75.806	ENSGMOG00000007943	apex1	99	75.806	Gadus_morhua
ENSCSEG00000017499	apex1	99	88.387	ENSGAFG00000005311	apex1	100	88.387	Gambusia_affinis
ENSCSEG00000017499	apex1	99	86.774	ENSGACG00000019497	apex1	99	89.474	Gasterosteus_aculeatus
ENSCSEG00000017499	apex1	99	67.722	ENSGAGG00000014999	APEX1	99	68.671	Gopherus_agassizii
ENSCSEG00000017499	apex1	99	64.780	ENSGGOG00000002128	APEX1	99	64.780	Gorilla_gorilla
ENSCSEG00000017499	apex1	99	88.710	ENSHBUG00000005894	apex1	100	88.710	Haplochromis_burtoni
ENSCSEG00000017499	apex1	99	64.353	ENSHGLG00000002848	APEX1	99	64.353	Heterocephalus_glaber_female
ENSCSEG00000017499	apex1	99	64.353	ENSHGLG00100017878	APEX1	99	64.353	Heterocephalus_glaber_male
ENSCSEG00000017499	apex1	99	85.209	ENSHCOG00000009961	apex1	100	85.209	Hippocampus_comes
ENSCSEG00000017499	apex1	99	81.553	ENSIPUG00000005799	apex1	99	81.553	Ictalurus_punctatus
ENSCSEG00000017499	apex1	99	63.836	ENSSTOG00000010096	APEX1	99	64.669	Ictidomys_tridecemlineatus
ENSCSEG00000017499	apex1	99	63.722	ENSJJAG00000012067	-	99	63.722	Jaculus_jaculus
ENSCSEG00000017499	apex1	89	59.857	ENSJJAG00000020465	-	94	58.020	Jaculus_jaculus
ENSCSEG00000017499	apex1	99	56.329	ENSJJAG00000003660	-	99	56.782	Jaculus_jaculus
ENSCSEG00000017499	apex1	99	86.452	ENSKMAG00000021171	apex1	100	86.452	Kryptolebias_marmoratus
ENSCSEG00000017499	apex1	99	85.161	ENSLBEG00000010248	apex1	100	85.161	Labrus_bergylta
ENSCSEG00000017499	apex1	99	70.513	ENSLACG00000008617	APEX1	99	70.513	Latimeria_chalumnae
ENSCSEG00000017499	apex1	99	76.038	ENSLOCG00000015516	apex1	99	76.038	Lepisosteus_oculatus
ENSCSEG00000017499	apex1	89	68.459	ENSLAFG00000021872	APEX1	99	63.291	Loxodonta_africana
ENSCSEG00000017499	apex1	99	64.780	ENSMFAG00000002565	APEX1	99	64.780	Macaca_fascicularis
ENSCSEG00000017499	apex1	99	64.780	ENSMMUG00000048039	APEX1	99	64.780	Macaca_mulatta
ENSCSEG00000017499	apex1	99	64.780	ENSMNEG00000036944	APEX1	99	64.780	Macaca_nemestrina
ENSCSEG00000017499	apex1	99	64.780	ENSMLEG00000042125	APEX1	99	64.780	Mandrillus_leucophaeus
ENSCSEG00000017499	apex1	99	88.710	ENSMAMG00000023526	apex1	100	88.710	Mastacembelus_armatus
ENSCSEG00000017499	apex1	99	88.710	ENSMZEG00005014187	apex1	100	88.710	Maylandia_zebra
ENSCSEG00000017499	apex1	99	63.608	ENSMAUG00000013994	Apex1	99	63.608	Mesocricetus_auratus
ENSCSEG00000017499	apex1	99	64.984	ENSMICG00000043554	APEX1	99	64.984	Microcebus_murinus
ENSCSEG00000017499	apex1	99	64.151	ENSMOCG00000013721	Apex1	99	64.151	Microtus_ochrogaster
ENSCSEG00000017499	apex1	99	86.174	ENSMMOG00000010031	apex1	97	86.174	Mola_mola
ENSCSEG00000017499	apex1	91	65.724	ENSMODG00000007125	APEX1	99	62.264	Monodelphis_domestica
ENSCSEG00000017499	apex1	90	81.786	ENSMALG00000011699	apex1	79	80.137	Monopterus_albus
ENSCSEG00000017499	apex1	99	65.190	MGP_CAROLIEiJ_G0019209	Apex1	99	65.190	Mus_caroli
ENSCSEG00000017499	apex1	99	64.984	ENSMUSG00000035960	Apex1	99	64.984	Mus_musculus
ENSCSEG00000017499	apex1	99	64.127	MGP_PahariEiJ_G0030232	Apex1	99	64.669	Mus_pahari
ENSCSEG00000017499	apex1	99	64.984	MGP_SPRETEiJ_G0020101	Apex1	99	64.984	Mus_spretus
ENSCSEG00000017499	apex1	99	63.750	ENSMLUG00000028957	APEX1	99	63.750	Myotis_lucifugus
ENSCSEG00000017499	apex1	87	52.158	ENSNGAG00000021748	-	85	52.158	Nannospalax_galili
ENSCSEG00000017499	apex1	99	64.669	ENSNGAG00000002725	-	99	64.669	Nannospalax_galili
ENSCSEG00000017499	apex1	99	88.710	ENSNBRG00000005334	apex1	91	88.710	Neolamprologus_brichardi
ENSCSEG00000017499	apex1	99	64.780	ENSNLEG00000010839	APEX1	99	65.176	Nomascus_leucogenys
ENSCSEG00000017499	apex1	99	63.578	ENSMEUG00000014519	APEX1	99	63.578	Notamacropus_eugenii
ENSCSEG00000017499	apex1	99	64.241	ENSOPRG00000014029	APEX1	99	64.241	Ochotona_princeps
ENSCSEG00000017499	apex1	99	64.353	ENSODEG00000001703	-	99	64.353	Octodon_degus
ENSCSEG00000017499	apex1	99	51.393	ENSODEG00000006583	-	99	51.393	Octodon_degus
ENSCSEG00000017499	apex1	81	55.159	ENSODEG00000004777	-	83	55.159	Octodon_degus
ENSCSEG00000017499	apex1	99	88.710	ENSONIG00000012089	apex1	100	88.710	Oreochromis_niloticus
ENSCSEG00000017499	apex1	88	66.545	ENSOANG00000008836	APEX1	80	62.654	Ornithorhynchus_anatinus
ENSCSEG00000017499	apex1	99	65.409	ENSOCUG00000005022	APEX1	99	65.615	Oryctolagus_cuniculus
ENSCSEG00000017499	apex1	99	86.817	ENSORLG00000012378	apex1	100	86.817	Oryzias_latipes
ENSCSEG00000017499	apex1	99	86.817	ENSORLG00020021371	apex1	100	86.817	Oryzias_latipes_hni
ENSCSEG00000017499	apex1	99	86.817	ENSORLG00015020089	apex1	100	86.817	Oryzias_latipes_hsok
ENSCSEG00000017499	apex1	99	86.174	ENSOMEG00000018876	apex1	100	86.174	Oryzias_melastigma
ENSCSEG00000017499	apex1	99	64.780	ENSOGAG00000013335	-	99	64.780	Otolemur_garnettii
ENSCSEG00000017499	apex1	89	60.573	ENSOGAG00000029355	-	99	56.774	Otolemur_garnettii
ENSCSEG00000017499	apex1	99	63.208	ENSOARG00000019740	-	99	63.291	Ovis_aries
ENSCSEG00000017499	apex1	97	54.072	ENSOARG00000014424	-	98	53.746	Ovis_aries
ENSCSEG00000017499	apex1	96	60.390	ENSOARG00000001876	-	99	60.714	Ovis_aries
ENSCSEG00000017499	apex1	99	65.094	ENSPPAG00000038760	APEX1	99	65.176	Pan_paniscus
ENSCSEG00000017499	apex1	99	65.094	ENSPPRG00000011794	APEX1	99	65.409	Panthera_pardus
ENSCSEG00000017499	apex1	99	65.409	ENSPTIG00000014829	APEX1	99	65.409	Panthera_tigris_altaica
ENSCSEG00000017499	apex1	99	65.094	ENSPTRG00000006093	APEX1	99	65.176	Pan_troglodytes
ENSCSEG00000017499	apex1	99	64.780	ENSPANG00000022757	APEX1	99	64.780	Papio_anubis
ENSCSEG00000017499	apex1	89	82.609	ENSPKIG00000003504	apex1	99	79.167	Paramormyrops_kingsleyae
ENSCSEG00000017499	apex1	86	75.836	ENSPMGG00000016596	apex1	79	75.836	Periophthalmus_magnuspinnatus
ENSCSEG00000017499	apex1	99	64.038	ENSPEMG00000019097	Apex1	99	64.038	Peromyscus_maniculatus_bairdii
ENSCSEG00000017499	apex1	92	71.080	ENSPMAG00000007275	-	97	71.080	Petromyzon_marinus
ENSCSEG00000017499	apex1	89	66.667	ENSPCIG00000023274	APEX1	99	62.025	Phascolarctos_cinereus
ENSCSEG00000017499	apex1	99	87.097	ENSPFOG00000004178	apex1	100	87.097	Poecilia_formosa
ENSCSEG00000017499	apex1	99	87.419	ENSPLAG00000012779	apex1	100	87.419	Poecilia_latipinna
ENSCSEG00000017499	apex1	99	87.097	ENSPMEG00000019623	apex1	100	87.097	Poecilia_mexicana
ENSCSEG00000017499	apex1	99	85.484	ENSPREG00000014298	apex1	99	85.484	Poecilia_reticulata
ENSCSEG00000017499	apex1	99	64.780	ENSPPYG00000005565	APEX1	99	64.780	Pongo_abelii
ENSCSEG00000017499	apex1	99	62.461	ENSPCAG00000010376	APEX1	99	62.461	Procavia_capensis
ENSCSEG00000017499	apex1	99	65.300	ENSPCOG00000021564	APEX1	99	65.300	Propithecus_coquereli
ENSCSEG00000017499	apex1	99	63.950	ENSPVAG00000010736	APEX1	99	63.950	Pteropus_vampyrus
ENSCSEG00000017499	apex1	99	89.032	ENSPNYG00000023940	apex1	100	89.032	Pundamilia_nyererei
ENSCSEG00000017499	apex1	92	81.119	ENSPNAG00000020897	apex1	96	81.053	Pygocentrus_nattereri
ENSCSEG00000017499	apex1	99	64.353	ENSRNOG00000009663	Apex1	99	64.353	Rattus_norvegicus
ENSCSEG00000017499	apex1	99	65.094	ENSRBIG00000038325	APEX1	98	65.094	Rhinopithecus_bieti
ENSCSEG00000017499	apex1	99	65.094	ENSSBOG00000018921	-	99	64.669	Saimiri_boliviensis_boliviensis
ENSCSEG00000017499	apex1	99	57.051	ENSSBOG00000031372	-	99	57.051	Saimiri_boliviensis_boliviensis
ENSCSEG00000017499	apex1	89	65.957	ENSSHAG00000013524	APEX1	99	62.112	Sarcophilus_harrisii
ENSCSEG00000017499	apex1	99	78.641	ENSSFOG00015001948	apex1	99	78.641	Scleropages_formosus
ENSCSEG00000017499	apex1	99	85.079	ENSSMAG00000013348	apex1	100	85.714	Scophthalmus_maximus
ENSCSEG00000017499	apex1	99	89.032	ENSSDUG00000016377	apex1	99	89.032	Seriola_dumerili
ENSCSEG00000017499	apex1	99	88.710	ENSSLDG00000023005	apex1	100	88.710	Seriola_lalandi_dorsalis
ENSCSEG00000017499	apex1	90	70.000	ENSSPUG00000000531	APEX1	95	70.000	Sphenodon_punctatus
ENSCSEG00000017499	apex1	99	86.774	ENSSPAG00000000458	apex1	100	86.774	Stegastes_partitus
ENSCSEG00000017499	apex1	99	65.094	ENSSSCG00000040060	-	99	64.465	Sus_scrofa
ENSCSEG00000017499	apex1	95	39.535	ENSSSCG00000039705	-	98	38.870	Sus_scrofa
ENSCSEG00000017499	apex1	76	57.872	ENSTGUG00000014378	APEX1	100	57.872	Taeniopygia_guttata
ENSCSEG00000017499	apex1	99	82.748	ENSTRUG00000004268	apex1	95	83.706	Takifugu_rubripes
ENSCSEG00000017499	apex1	99	82.903	ENSTNIG00000005778	apex1	100	82.903	Tetraodon_nigroviridis
ENSCSEG00000017499	apex1	99	61.006	ENSTBEG00000006405	APEX1	99	61.006	Tupaia_belangeri
ENSCSEG00000017499	apex1	76	66.383	ENSTTRG00000007860	APEX1	100	66.383	Tursiops_truncatus
ENSCSEG00000017499	apex1	99	63.924	ENSUAMG00000010457	APEX1	99	63.924	Ursus_americanus
ENSCSEG00000017499	apex1	99	63.924	ENSUMAG00000009178	APEX1	99	63.924	Ursus_maritimus
ENSCSEG00000017499	apex1	76	62.553	ENSVPAG00000005083	APEX1	100	62.553	Vicugna_pacos
ENSCSEG00000017499	apex1	99	64.151	ENSVVUG00000009010	APEX1	99	65.094	Vulpes_vulpes
ENSCSEG00000017499	apex1	99	68.790	ENSXETG00000024773	apex1	99	69.427	Xenopus_tropicalis
ENSCSEG00000017499	apex1	99	87.742	ENSXCOG00000015233	apex1	99	87.742	Xiphophorus_couchianus
ENSCSEG00000017499	apex1	99	87.742	ENSXMAG00000006195	apex1	100	87.742	Xiphophorus_maculatus