EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSEG00000017647 (Gene tree)
Gene ID
103394401
Gene Symbol
atxn1a
Alias
atxn1b|si:ch211-125a6.1
Full Name
ataxin 1
Gene Type
protein_coding
Species
Cynoglossus_semilaevis
Status
putative
Strand
Plus strand
Length
55898 bases
Position
chr18:10566340-10622237
Accession
103394401
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSEP00000027621AXHPF08517.128e-4311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSET00000027990-3202XM_008331694ENSCSEP00000027621823 (aa)XP_008329916UPI000498561A
Gene Model
Click here to download ENSCSEG00000017647's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000017647's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSEG00000017647atxn1a9939.906ENSCSEG00000004666atxn1b9939.456
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSEG00000017647atxn1a10040.839ENSG00000124788ATXN17145.551Homo_sapiens
ENSCSEG00000017647atxn1a10074.101ENSAPOG00000018662atxn1a10074.221Acanthochromis_polyacanthus
ENSCSEG00000017647atxn1a9940.067ENSAPOG00000005003atxn1b9939.038Acanthochromis_polyacanthus
ENSCSEG00000017647atxn1a10042.022ENSAMEG00000004299ATXN110041.302Ailuropoda_melanoleuca
ENSCSEG00000017647atxn1a8888.235ENSACIG00000016088atxn1a10067.310Amphilophus_citrinellus
ENSCSEG00000017647atxn1a9937.253ENSACIG00000014661atxn1b6538.944Amphilophus_citrinellus
ENSCSEG00000017647atxn1a9940.180ENSAOCG00000019715atxn1b9939.842Amphiprion_ocellaris
ENSCSEG00000017647atxn1a10073.772ENSAOCG00000015796atxn1a10074.251Amphiprion_ocellaris
ENSCSEG00000017647atxn1a9940.067ENSAPEG00000022436atxn1b9939.842Amphiprion_percula
ENSCSEG00000017647atxn1a10073.772ENSAPEG00000011313atxn1a10074.251Amphiprion_percula
ENSCSEG00000017647atxn1a9937.919ENSATEG00000002982atxn1b9938.219Anabas_testudineus
ENSCSEG00000017647atxn1a10072.149ENSATEG00000013601atxn1a10072.989Anabas_testudineus
ENSCSEG00000017647atxn1a10043.964ENSACAG00000003919ATXN110043.084Anolis_carolinensis
ENSCSEG00000017647atxn1a7937.027ENSANAG00000025424-9637.063Aotus_nancymaae
ENSCSEG00000017647atxn1a9941.375ENSANAG00000025206-9541.563Aotus_nancymaae
ENSCSEG00000017647atxn1a9937.222ENSACLG00000005697atxn1b9938.047Astatotilapia_calliptera
ENSCSEG00000017647atxn1a10070.659ENSACLG00000015429atxn1a10070.659Astatotilapia_calliptera
ENSCSEG00000017647atxn1a10050.357ENSAMXG00000042368atxn1a10051.905Astyanax_mexicanus
ENSCSEG00000017647atxn1a10041.751ENSBTAG00000019675ATXN110041.190Bos_taurus
ENSCSEG00000017647atxn1a9941.375ENSCJAG00000006563ATXN19441.563Callithrix_jacchus
ENSCSEG00000017647atxn1a10043.806ENSCAFG00000009934ATXN110042.680Canis_familiaris
ENSCSEG00000017647atxn1a9943.581ENSCAFG00020012647ATXN19542.005Canis_lupus_dingo
ENSCSEG00000017647atxn1a10041.403ENSCHIG00000018697ATXN110041.037Capra_hircus
ENSCSEG00000017647atxn1a5856.805ENSTSYG00000000858ATXN18756.213Carlito_syrichta
ENSCSEG00000017647atxn1a10042.584ENSCAPG00000013095ATXN110041.928Cavia_aperea
ENSCSEG00000017647atxn1a10042.971ENSCPOG00000022869ATXN110042.308Cavia_porcellus
ENSCSEG00000017647atxn1a10041.620ENSCCAG00000018590ATXN110041.921Cebus_capucinus
ENSCSEG00000017647atxn1a10041.414ENSCATG00000042777ATXN110041.229Cercocebus_atys
ENSCSEG00000017647atxn1a10042.792ENSCLAG00000002212ATXN110042.338Chinchilla_lanigera
ENSCSEG00000017647atxn1a10041.395ENSCSAG00000007589ATXN110040.985Chlorocebus_sabaeus
ENSCSEG00000017647atxn1a10044.037ENSCPBG00000022373ATXN110042.645Chrysemys_picta_bellii
ENSCSEG00000017647atxn1a10041.968ENSCANG00000033673ATXN110041.282Colobus_angolensis_palliatus
ENSCSEG00000017647atxn1a10041.975ENSCGRG00001022108Atxn110041.329Cricetulus_griseus_chok1gshd
ENSCSEG00000017647atxn1a10042.356ENSCGRG00000014084Atxn110041.705Cricetulus_griseus_crigri
ENSCSEG00000017647atxn1a10065.186ENSCVAG00000023240atxn1a10064.826Cyprinodon_variegatus
ENSCSEG00000017647atxn1a9938.839ENSCVAG00000010945atxn1b9937.751Cyprinodon_variegatus
ENSCSEG00000017647atxn1a10050.474ENSDARG00000061687atxn1a10050.645Danio_rerio
ENSCSEG00000017647atxn1a9939.033ENSDARG00000060862atxn1b9937.795Danio_rerio
ENSCSEG00000017647atxn1a8150.924ENSDNOG00000048471ATXN17351.340Dasypus_novemcinctus
ENSCSEG00000017647atxn1a10041.509ENSDORG00000005940Atxn110040.954Dipodomys_ordii
ENSCSEG00000017647atxn1a8451.613ENSETEG00000003815ATXN18653.093Echinops_telfairi
ENSCSEG00000017647atxn1a10042.986ENSEASG00005011799ATXN110042.486Equus_asinus_asinus
ENSCSEG00000017647atxn1a10042.986ENSECAG00000009251ATXN110042.486Equus_caballus
ENSCSEG00000017647atxn1a10041.986ENSEEUG00000007120ATXN110041.403Erinaceus_europaeus
ENSCSEG00000017647atxn1a8859.574ENSELUG00000001311atxn1b7159.574Esox_lucius
ENSCSEG00000017647atxn1a9949.395ENSELUG00000003691atxn1a9650.000Esox_lucius
ENSCSEG00000017647atxn1a10041.903ENSFCAG00000011298ATXN110041.629Felis_catus
ENSCSEG00000017647atxn1a10042.825ENSFALG00000013400ATXN110042.034Ficedula_albicollis
ENSCSEG00000017647atxn1a8552.294ENSFDAG00000020905ATXN19948.963Fukomys_damarensis
ENSCSEG00000017647atxn1a10066.106ENSFHEG00000019419atxn1a10065.745Fundulus_heteroclitus
ENSCSEG00000017647atxn1a9938.384ENSFHEG00000017226atxn1b9937.542Fundulus_heteroclitus
ENSCSEG00000017647atxn1a9937.342ENSGMOG00000013508atxn1b6838.684Gadus_morhua
ENSCSEG00000017647atxn1a10043.572ENSGALG00000012709ATXN110042.645Gallus_gallus
ENSCSEG00000017647atxn1a9935.287ENSGAFG00000007295atxn1b9845.455Gambusia_affinis
ENSCSEG00000017647atxn1a10066.347ENSGAFG00000010544atxn1a10066.587Gambusia_affinis
ENSCSEG00000017647atxn1a10060.357ENSGACG00000003472atxn1a10060.072Gasterosteus_aculeatus
ENSCSEG00000017647atxn1a9937.428ENSGACG00000008747atxn1b9936.497Gasterosteus_aculeatus
ENSCSEG00000017647atxn1a10043.922ENSGAGG00000006868ATXN110043.070Gopherus_agassizii
ENSCSEG00000017647atxn1a10041.091ENSGGOG00000004169ATXN17145.551Gorilla_gorilla
ENSCSEG00000017647atxn1a9937.111ENSHBUG00000016081atxn1b9938.192Haplochromis_burtoni
ENSCSEG00000017647atxn1a10070.778ENSHBUG00000002508atxn1a10070.778Haplochromis_burtoni
ENSCSEG00000017647atxn1a10041.829ENSHGLG00000009360ATXN110041.980Heterocephalus_glaber_female
ENSCSEG00000017647atxn1a10041.714ENSHGLG00100003038ATXN110041.866Heterocephalus_glaber_male
ENSCSEG00000017647atxn1a10038.117ENSHCOG00000014835atxn1b9937.868Hippocampus_comes
ENSCSEG00000017647atxn1a10053.477ENSHCOG00000019032atxn1a10053.469Hippocampus_comes
ENSCSEG00000017647atxn1a10050.119ENSIPUG00000001402atxn110048.485Ictalurus_punctatus
ENSCSEG00000017647atxn1a9937.755ENSIPUG00000002088atxn1b9936.678Ictalurus_punctatus
ENSCSEG00000017647atxn1a10042.517ENSSTOG00000025423ATXN110041.789Ictidomys_tridecemlineatus
ENSCSEG00000017647atxn1a10042.614ENSJJAG00000000377Atxn110041.344Jaculus_jaculus
ENSCSEG00000017647atxn1a9940.223ENSKMAG00000013507atxn1b9938.771Kryptolebias_marmoratus
ENSCSEG00000017647atxn1a10069.434ENSKMAG00000007216atxn1a10068.712Kryptolebias_marmoratus
ENSCSEG00000017647atxn1a10039.019ENSLBEG00000024264atxn1b6443.501Labrus_bergylta
ENSCSEG00000017647atxn1a10070.609ENSLBEG00000024388atxn1a10072.269Labrus_bergylta
ENSCSEG00000017647atxn1a10044.914ENSLACG00000005371ATXN110043.433Latimeria_chalumnae
ENSCSEG00000017647atxn1a10050.058ENSLOCG00000002910atxn1a10050.579Lepisosteus_oculatus
ENSCSEG00000017647atxn1a10042.597ENSLAFG00000015231ATXN110041.818Loxodonta_africana
ENSCSEG00000017647atxn1a10040.919ENSMFAG00000032779ATXN19841.071Macaca_fascicularis
ENSCSEG00000017647atxn1a10041.433ENSMMUG00000002940ATXN17245.551Macaca_mulatta
ENSCSEG00000017647atxn1a10041.387ENSMNEG00000036667ATXN110041.203Macaca_nemestrina
ENSCSEG00000017647atxn1a8358.333ENSMLEG00000040480ATXN19658.333Mandrillus_leucophaeus
ENSCSEG00000017647atxn1a10074.132ENSMAMG00000014004atxn1a10075.210Mastacembelus_armatus
ENSCSEG00000017647atxn1a9938.504ENSMAMG00000011503atxn1b9937.808Mastacembelus_armatus
ENSCSEG00000017647atxn1a9937.222ENSMZEG00005015064atxn1b9938.047Maylandia_zebra
ENSCSEG00000017647atxn1a10070.659ENSMZEG00005003602atxn1a10070.659Maylandia_zebra
ENSCSEG00000017647atxn1a10042.373ENSMGAG00000003028ATXN110041.336Meleagris_gallopavo
ENSCSEG00000017647atxn1a10042.081ENSMAUG00000011491Atxn110041.619Mesocricetus_auratus
ENSCSEG00000017647atxn1a10041.818ENSMICG00000011875ATXN110041.430Microcebus_murinus
ENSCSEG00000017647atxn1a10042.582ENSMOCG00000001527Atxn110042.111Microtus_ochrogaster
ENSCSEG00000017647atxn1a10071.188ENSMMOG00000018593atxn1a10071.789Mola_mola
ENSCSEG00000017647atxn1a9354.275ENSMMOG00000002884atxn1b9957.087Mola_mola
ENSCSEG00000017647atxn1a10043.891ENSMODG00000010827ATXN110042.744Monodelphis_domestica
ENSCSEG00000017647atxn1a10073.261ENSMALG00000005209atxn1a10073.861Monopterus_albus
ENSCSEG00000017647atxn1a9938.889ENSMALG00000012137atxn1b9938.573Monopterus_albus
ENSCSEG00000017647atxn1a10042.534MGP_CAROLIEiJ_G0018479Atxn110042.165Mus_caroli
ENSCSEG00000017647atxn1a10042.760ENSMUSG00000046876Atxn110042.390Mus_musculus
ENSCSEG00000017647atxn1a10042.421MGP_PahariEiJ_G0019546Atxn110041.874Mus_pahari
ENSCSEG00000017647atxn1a10042.486MGP_SPRETEiJ_G0019357Atxn110042.052Mus_spretus
ENSCSEG00000017647atxn1a10042.503ENSMPUG00000005398ATXN110042.129Mustela_putorius_furo
ENSCSEG00000017647atxn1a10043.213ENSMLUG00000000896ATXN110042.565Myotis_lucifugus
ENSCSEG00000017647atxn1a10043.019ENSNGAG00000020481Atxn110042.225Nannospalax_galili
ENSCSEG00000017647atxn1a9937.428ENSNBRG00000014776atxn1b9837.718Neolamprologus_brichardi
ENSCSEG00000017647atxn1a10070.933ENSNBRG00000013216atxn1a10071.172Neolamprologus_brichardi
ENSCSEG00000017647atxn1a10041.057ENSNLEG00000001064ATXN110040.873Nomascus_leucogenys
ENSCSEG00000017647atxn1a9940.682ENSMEUG00000014680ATXN19639.294Notamacropus_eugenii
ENSCSEG00000017647atxn1a10040.749ENSOPRG00000004813ATXN110040.699Ochotona_princeps
ENSCSEG00000017647atxn1a10042.568ENSODEG00000006297ATXN110041.845Octodon_degus
ENSCSEG00000017647atxn1a9938.792ENSONIG00000003094atxn1b9937.979Oreochromis_niloticus
ENSCSEG00000017647atxn1a8934.182ENSOANG00000011866ATXN16838.436Ornithorhynchus_anatinus
ENSCSEG00000017647atxn1a10041.714ENSOCUG00000015360ATXN110041.130Oryctolagus_cuniculus
ENSCSEG00000017647atxn1a10062.892ENSORLG00000013003atxn1a9963.494Oryzias_latipes
ENSCSEG00000017647atxn1a9939.135ENSORLG00000008288atxn1b9938.801Oryzias_latipes
ENSCSEG00000017647atxn1a9939.690ENSORLG00020013514atxn1b9938.702Oryzias_latipes_hni
ENSCSEG00000017647atxn1a10064.019ENSORLG00020006722atxn1a9963.373Oryzias_latipes_hni
ENSCSEG00000017647atxn1a10064.380ENSORLG00015014668atxn1a9963.494Oryzias_latipes_hsok
ENSCSEG00000017647atxn1a9939.159ENSORLG00015019876atxn1b9938.031Oryzias_latipes_hsok
ENSCSEG00000017647atxn1a10063.889ENSOMEG00000012883atxn1a9865.217Oryzias_melastigma
ENSCSEG00000017647atxn1a9938.932ENSOMEG00000003259atxn1b9937.165Oryzias_melastigma
ENSCSEG00000017647atxn1a9941.818ENSOGAG00000028623ATXN110041.610Otolemur_garnettii
ENSCSEG00000017647atxn1a7856.604ENSOARG00000012141ATXN18056.604Ovis_aries
ENSCSEG00000017647atxn1a10040.864ENSPPAG00000028993ATXN17145.400Pan_paniscus
ENSCSEG00000017647atxn1a10045.354ENSPPRG00000004547ATXN19944.041Panthera_pardus
ENSCSEG00000017647atxn1a10040.778ENSPTRG00000039250ATXN17145.400Pan_troglodytes
ENSCSEG00000017647atxn1a9941.480ENSPANG00000024249ATXN19941.097Papio_anubis
ENSCSEG00000017647atxn1a10046.778ENSPKIG00000003054atxn1a10045.738Paramormyrops_kingsleyae
ENSCSEG00000017647atxn1a10046.495ENSPKIG00000018323atxn1b10046.487Paramormyrops_kingsleyae
ENSCSEG00000017647atxn1a7640.292ENSPSIG00000007158ATXN19239.118Pelodiscus_sinensis
ENSCSEG00000017647atxn1a9938.766ENSPMGG00000013610atxn1b9937.806Periophthalmus_magnuspinnatus
ENSCSEG00000017647atxn1a9157.831ENSPMGG00000022926atxn1a8774.000Periophthalmus_magnuspinnatus
ENSCSEG00000017647atxn1a10042.290ENSPEMG00000014930Atxn110041.705Peromyscus_maniculatus_bairdii
ENSCSEG00000017647atxn1a10043.651ENSPCIG00000019413ATXN110042.727Phascolarctos_cinereus
ENSCSEG00000017647atxn1a10066.467ENSPFOG00000014422atxn1a10067.066Poecilia_formosa
ENSCSEG00000017647atxn1a9938.122ENSPLAG00000018703atxn1b9938.695Poecilia_latipinna
ENSCSEG00000017647atxn1a10060.386ENSPLAG00000018978atxn1a10060.628Poecilia_latipinna
ENSCSEG00000017647atxn1a10066.347ENSPMEG00000002647atxn1a10066.946Poecilia_mexicana
ENSCSEG00000017647atxn1a9937.995ENSPREG00000020308atxn1b9939.077Poecilia_reticulata
ENSCSEG00000017647atxn1a10065.988ENSPREG00000008333atxn1a10066.707Poecilia_reticulata
ENSCSEG00000017647atxn1a10040.642ENSPPYG00000016254ATXN17145.551Pongo_abelii
ENSCSEG00000017647atxn1a7564.000ENSPCAG00000008196ATXN16162.264Procavia_capensis
ENSCSEG00000017647atxn1a10042.177ENSPCOG00000013612ATXN110041.676Propithecus_coquereli
ENSCSEG00000017647atxn1a9145.381ENSPVAG00000016937ATXN19639.684Pteropus_vampyrus
ENSCSEG00000017647atxn1a10070.539ENSPNYG00000011920atxn1a10070.539Pundamilia_nyererei
ENSCSEG00000017647atxn1a9937.806ENSPNYG00000017095atxn1b9837.602Pundamilia_nyererei
ENSCSEG00000017647atxn1a10052.969ENSPNAG00000010587atxn1a10052.656Pygocentrus_nattereri
ENSCSEG00000017647atxn1a10042.111ENSRNOG00000016998Atxn110041.516Rattus_norvegicus
ENSCSEG00000017647atxn1a10041.117ENSRBIG00000028213ATXN17245.701Rhinopithecus_bieti
ENSCSEG00000017647atxn1a10041.348ENSRROG00000032751ATXN110041.163Rhinopithecus_roxellana
ENSCSEG00000017647atxn1a10041.263ENSSBOG00000017381-10041.336Saimiri_boliviensis_boliviensis
ENSCSEG00000017647atxn1a10047.251ENSSFOG00015005189atxn110047.258Scleropages_formosus
ENSCSEG00000017647atxn1a10045.612ENSSFOG00015000179atxn1b10045.381Scleropages_formosus
ENSCSEG00000017647atxn1a9938.728ENSSMAG00000019621atxn1b6544.041Scophthalmus_maximus
ENSCSEG00000017647atxn1a9975.333ENSSMAG00000007731atxn1a9475.333Scophthalmus_maximus
ENSCSEG00000017647atxn1a10076.766ENSSDUG00000011376atxn1a10077.725Seriola_dumerili
ENSCSEG00000017647atxn1a10076.527ENSSLDG00000013505atxn1a10077.485Seriola_lalandi_dorsalis
ENSCSEG00000017647atxn1a10042.369ENSSPUG00000016650ATXN110041.998Sphenodon_punctatus
ENSCSEG00000017647atxn1a10074.611ENSSPAG00000019849atxn1a10075.090Stegastes_partitus
ENSCSEG00000017647atxn1a9939.595ENSSPAG00000003388atxn1b9940.302Stegastes_partitus
ENSCSEG00000017647atxn1a10042.247ENSSSCG00000001065ATXN110041.685Sus_scrofa
ENSCSEG00000017647atxn1a10040.858ENSTGUG00000005986ATXN110039.842Taeniopygia_guttata
ENSCSEG00000017647atxn1a10063.625ENSTRUG00000014645atxn1a10063.265Takifugu_rubripes
ENSCSEG00000017647atxn1a9938.540ENSTRUG00000024789atxn1b9937.931Takifugu_rubripes
ENSCSEG00000017647atxn1a10038.993ENSTNIG00000018398atxn1b10037.399Tetraodon_nigroviridis
ENSCSEG00000017647atxn1a10062.771ENSTNIG00000005089atxn1a10061.594Tetraodon_nigroviridis
ENSCSEG00000017647atxn1a10041.928ENSTTRG00000014678ATXN19641.705Tursiops_truncatus
ENSCSEG00000017647atxn1a10041.592ENSUAMG00000004064ATXN110041.480Ursus_americanus
ENSCSEG00000017647atxn1a5846.627ENSUMAG00000017635-9546.614Ursus_maritimus
ENSCSEG00000017647atxn1a10043.933ENSVVUG00000003386ATXN110042.713Vulpes_vulpes
ENSCSEG00000017647atxn1a10040.805ENSXETG00000014184atxn110040.711Xenopus_tropicalis
ENSCSEG00000017647atxn1a9938.318ENSXCOG00000019714atxn1b9837.133Xiphophorus_couchianus
ENSCSEG00000017647atxn1a10063.285ENSXCOG00000020061atxn1a10063.462Xiphophorus_couchianus
ENSCSEG00000017647atxn1a9935.246ENSXMAG00000014270atxn1b9843.823Xiphophorus_maculatus
ENSCSEG00000017647atxn1a10066.108ENSXMAG00000003615atxn1a10066.228Xiphophorus_maculatus

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