EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000017661 (Gene tree)
Gene ID: 103393217
Gene Symbol: si:ch211-11k18.4
Alias: -
Full Name: uncharacterized LOC103393217
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 3344 bases
Position: chr17:10569450-10572793
Accession: 103393217
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000027658	MMR_HSR1	PF01926.23	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000028028	-	1293	XM_008330097	ENSCSEP00000027658	430 (aa)	XP_008328319	-

Gene Model

Click here to download ENSCSEG00000017661's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000017661's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000017661	si:ch211-11k18.4	99	59.071	ENSCSEG00000017512	si:dkey-98f17.5	95	59.756

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000017661	si:ch211-11k18.4	100	86.253	ENSAPOG00000018833	si:ch211-11k18.4	100	86.253	Acanthochromis_polyacanthus
ENSCSEG00000017661	si:ch211-11k18.4	99	58.889	ENSAPOG00000010378	si:dkey-98f17.5	100	58.889	Acanthochromis_polyacanthus
ENSCSEG00000017661	si:ch211-11k18.4	99	58.278	ENSACIG00000017719	si:dkey-98f17.5	100	57.556	Amphilophus_citrinellus
ENSCSEG00000017661	si:ch211-11k18.4	99	82.183	ENSACIG00000006696	si:ch211-11k18.4	99	82.183	Amphilophus_citrinellus
ENSCSEG00000017661	si:ch211-11k18.4	99	60.000	ENSAOCG00000008661	si:dkey-98f17.5	100	60.000	Amphiprion_ocellaris
ENSCSEG00000017661	si:ch211-11k18.4	100	86.918	ENSAOCG00000014284	si:ch211-11k18.4	100	86.918	Amphiprion_ocellaris
ENSCSEG00000017661	si:ch211-11k18.4	99	60.000	ENSAPEG00000022447	si:dkey-98f17.5	100	60.000	Amphiprion_percula
ENSCSEG00000017661	si:ch211-11k18.4	100	86.696	ENSAPEG00000014910	si:ch211-11k18.4	100	86.696	Amphiprion_percula
ENSCSEG00000017661	si:ch211-11k18.4	99	60.000	ENSATEG00000007188	si:dkey-98f17.5	100	58.667	Anabas_testudineus
ENSCSEG00000017661	si:ch211-11k18.4	100	85.809	ENSATEG00000004775	si:ch211-11k18.4	100	85.809	Anabas_testudineus
ENSCSEG00000017661	si:ch211-11k18.4	98	64.798	ENSACAG00000028632	-	98	64.798	Anolis_carolinensis
ENSCSEG00000017661	si:ch211-11k18.4	99	59.778	ENSACLG00000001308	si:dkey-98f17.5	100	58.444	Astatotilapia_calliptera
ENSCSEG00000017661	si:ch211-11k18.4	100	85.588	ENSACLG00000007907	si:ch211-11k18.4	100	85.809	Astatotilapia_calliptera
ENSCSEG00000017661	si:ch211-11k18.4	99	78.222	ENSAMXG00000017817	si:ch211-11k18.4	100	78.222	Astyanax_mexicanus
ENSCSEG00000017661	si:ch211-11k18.4	99	60.000	ENSAMXG00000001190	si:dkey-98f17.5	100	59.333	Astyanax_mexicanus
ENSCSEG00000017661	si:ch211-11k18.4	84	62.567	ENSCING00000020807	-	98	62.903	Ciona_intestinalis
ENSCSEG00000017661	si:ch211-11k18.4	99	58.889	ENSCSAVG00000009987	-	100	58.444	Ciona_savignyi
ENSCSEG00000017661	si:ch211-11k18.4	99	58.667	ENSCVAG00000011351	si:dkey-98f17.5	100	58.667	Cyprinodon_variegatus
ENSCSEG00000017661	si:ch211-11k18.4	100	84.257	ENSCVAG00000015346	si:ch211-11k18.4	100	84.257	Cyprinodon_variegatus
ENSCSEG00000017661	si:ch211-11k18.4	97	59.368	ENSDARG00000068863	si:dkey-98f17.5	100	59.184	Danio_rerio
ENSCSEG00000017661	si:ch211-11k18.4	99	79.556	ENSDARG00000087869	si:ch211-11k18.4	100	89.286	Danio_rerio
ENSCSEG00000017661	si:ch211-11k18.4	83	57.182	ENSEBUG00000007620	si:dkey-98f17.5	98	57.337	Eptatretus_burgeri
ENSCSEG00000017661	si:ch211-11k18.4	99	58.537	ENSELUG00000003365	si:dkey-98f17.5	100	58.444	Esox_lucius
ENSCSEG00000017661	si:ch211-11k18.4	100	82.040	ENSFHEG00000019820	si:ch211-11k18.4	100	82.040	Fundulus_heteroclitus
ENSCSEG00000017661	si:ch211-11k18.4	99	59.778	ENSFHEG00000012744	si:dkey-98f17.5	100	59.111	Fundulus_heteroclitus
ENSCSEG00000017661	si:ch211-11k18.4	89	73.515	ENSGMOG00000003492	si:ch211-11k18.4	100	73.515	Gadus_morhua
ENSCSEG00000017661	si:ch211-11k18.4	99	59.333	ENSGAFG00000012362	si:dkey-98f17.5	89	58.889	Gambusia_affinis
ENSCSEG00000017661	si:ch211-11k18.4	100	81.596	ENSGAFG00000005677	si:ch211-11k18.4	100	81.596	Gambusia_affinis
ENSCSEG00000017661	si:ch211-11k18.4	60	73.462	ENSGACG00000009399	si:dkey-98f17.5	100	73.462	Gasterosteus_aculeatus
ENSCSEG00000017661	si:ch211-11k18.4	89	83.168	ENSGACG00000013134	si:ch211-11k18.4	100	83.168	Gasterosteus_aculeatus
ENSCSEG00000017661	si:ch211-11k18.4	99	59.778	ENSHBUG00000008331	si:dkey-98f17.5	100	58.444	Haplochromis_burtoni
ENSCSEG00000017661	si:ch211-11k18.4	100	85.809	ENSHBUG00000020638	si:ch211-11k18.4	100	86.031	Haplochromis_burtoni
ENSCSEG00000017661	si:ch211-11k18.4	99	57.175	ENSHCOG00000016505	si:dkey-98f17.5	98	56.948	Hippocampus_comes
ENSCSEG00000017661	si:ch211-11k18.4	99	84.000	ENSHCOG00000014773	si:ch211-11k18.4	100	84.000	Hippocampus_comes
ENSCSEG00000017661	si:ch211-11k18.4	89	64.851	ENSIPUG00000016694	si:ch211-11k18.4	81	68.293	Ictalurus_punctatus
ENSCSEG00000017661	si:ch211-11k18.4	99	58.667	ENSIPUG00000019981	si:dkey-98f17.5	100	57.812	Ictalurus_punctatus
ENSCSEG00000017661	si:ch211-11k18.4	96	76.303	ENSIPUG00000016678	si:ch211-11k18.4	99	76.540	Ictalurus_punctatus
ENSCSEG00000017661	si:ch211-11k18.4	99	59.111	ENSKMAG00000014997	si:dkey-98f17.5	100	58.667	Kryptolebias_marmoratus
ENSCSEG00000017661	si:ch211-11k18.4	99	84.444	ENSKMAG00000009327	si:ch211-11k18.4	99	84.444	Kryptolebias_marmoratus
ENSCSEG00000017661	si:ch211-11k18.4	99	59.111	ENSLBEG00000012756	si:dkey-98f17.5	100	58.667	Labrus_bergylta
ENSCSEG00000017661	si:ch211-11k18.4	98	58.691	ENSLACG00000017433	si:dkey-98f17.5	97	59.142	Latimeria_chalumnae
ENSCSEG00000017661	si:ch211-11k18.4	99	70.732	ENSLACG00000006280	si:ch211-11k18.4	100	70.732	Latimeria_chalumnae
ENSCSEG00000017661	si:ch211-11k18.4	99	62.138	ENSLACG00000004899	-	99	62.138	Latimeria_chalumnae
ENSCSEG00000017661	si:ch211-11k18.4	99	58.850	ENSLOCG00000003824	si:dkey-98f17.5	99	58.850	Lepisosteus_oculatus
ENSCSEG00000017661	si:ch211-11k18.4	99	59.333	ENSMAMG00000014528	si:dkey-98f17.5	100	58.889	Mastacembelus_armatus
ENSCSEG00000017661	si:ch211-11k18.4	96	85.417	ENSMAMG00000002536	si:ch211-11k18.4	99	85.417	Mastacembelus_armatus
ENSCSEG00000017661	si:ch211-11k18.4	100	85.366	ENSMZEG00005008941	si:ch211-11k18.4	100	85.588	Maylandia_zebra
ENSCSEG00000017661	si:ch211-11k18.4	99	59.778	ENSMZEG00005016572	si:dkey-98f17.5	100	58.444	Maylandia_zebra
ENSCSEG00000017661	si:ch211-11k18.4	100	81.348	ENSMMOG00000012485	si:ch211-11k18.4	100	80.674	Mola_mola
ENSCSEG00000017661	si:ch211-11k18.4	97	59.268	ENSMALG00000012761	si:dkey-98f17.5	100	59.589	Monopterus_albus
ENSCSEG00000017661	si:ch211-11k18.4	100	83.149	ENSMALG00000019735	si:ch211-11k18.4	100	83.149	Monopterus_albus
ENSCSEG00000017661	si:ch211-11k18.4	99	59.465	ENSNBRG00000006068	si:dkey-98f17.5	100	58.705	Neolamprologus_brichardi
ENSCSEG00000017661	si:ch211-11k18.4	96	85.185	ENSNBRG00000002220	si:ch211-11k18.4	98	85.417	Neolamprologus_brichardi
ENSCSEG00000017661	si:ch211-11k18.4	99	60.000	ENSONIG00000013568	si:dkey-98f17.5	100	58.667	Oreochromis_niloticus
ENSCSEG00000017661	si:ch211-11k18.4	100	86.031	ENSONIG00000019412	si:ch211-11k18.4	100	86.031	Oreochromis_niloticus
ENSCSEG00000017661	si:ch211-11k18.4	100	82.705	ENSORLG00000012015	si:ch211-11k18.4	100	82.705	Oryzias_latipes
ENSCSEG00000017661	si:ch211-11k18.4	90	59.367	ENSORLG00000007958	si:dkey-98f17.5	95	59.124	Oryzias_latipes
ENSCSEG00000017661	si:ch211-11k18.4	100	82.262	ENSORLG00020012386	si:ch211-11k18.4	100	82.262	Oryzias_latipes_hni
ENSCSEG00000017661	si:ch211-11k18.4	99	59.424	ENSORLG00020013350	si:dkey-98f17.5	100	58.093	Oryzias_latipes_hni
ENSCSEG00000017661	si:ch211-11k18.4	99	58.093	ENSORLG00015002000	si:dkey-98f17.5	100	57.871	Oryzias_latipes_hsok
ENSCSEG00000017661	si:ch211-11k18.4	100	82.927	ENSORLG00015022862	si:ch211-11k18.4	100	82.927	Oryzias_latipes_hsok
ENSCSEG00000017661	si:ch211-11k18.4	99	58.889	ENSOMEG00000003154	si:dkey-98f17.5	100	58.028	Oryzias_melastigma
ENSCSEG00000017661	si:ch211-11k18.4	100	83.149	ENSOMEG00000018686	si:ch211-11k18.4	100	83.149	Oryzias_melastigma
ENSCSEG00000017661	si:ch211-11k18.4	99	76.000	ENSPKIG00000018807	si:ch211-11k18.4	100	76.889	Paramormyrops_kingsleyae
ENSCSEG00000017661	si:ch211-11k18.4	99	73.556	ENSPKIG00000023918	-	98	73.556	Paramormyrops_kingsleyae
ENSCSEG00000017661	si:ch211-11k18.4	99	58.940	ENSPKIG00000024621	si:dkey-98f17.5	100	58.980	Paramormyrops_kingsleyae
ENSCSEG00000017661	si:ch211-11k18.4	99	59.333	ENSPMGG00000019065	si:dkey-98f17.5	100	58.444	Periophthalmus_magnuspinnatus
ENSCSEG00000017661	si:ch211-11k18.4	100	84.701	ENSPMGG00000016507	si:ch211-11k18.4	100	84.701	Periophthalmus_magnuspinnatus
ENSCSEG00000017661	si:ch211-11k18.4	99	58.720	ENSPFOG00000015142	si:dkey-98f17.5	100	58.278	Poecilia_formosa
ENSCSEG00000017661	si:ch211-11k18.4	100	83.814	ENSPFOG00000007976	si:ch211-11k18.4	100	83.814	Poecilia_formosa
ENSCSEG00000017661	si:ch211-11k18.4	100	83.592	ENSPLAG00000019794	si:ch211-11k18.4	100	83.592	Poecilia_latipinna
ENSCSEG00000017661	si:ch211-11k18.4	99	59.111	ENSPLAG00000003709	si:dkey-98f17.5	100	58.667	Poecilia_latipinna
ENSCSEG00000017661	si:ch211-11k18.4	99	58.667	ENSPMEG00000018709	si:dkey-98f17.5	94	58.667	Poecilia_mexicana
ENSCSEG00000017661	si:ch211-11k18.4	100	83.814	ENSPMEG00000024198	si:ch211-11k18.4	100	83.814	Poecilia_mexicana
ENSCSEG00000017661	si:ch211-11k18.4	94	78.837	ENSPREG00000015319	si:ch211-11k18.4	85	84.906	Poecilia_reticulata
ENSCSEG00000017661	si:ch211-11k18.4	97	59.767	ENSPREG00000000708	si:dkey-98f17.5	100	59.767	Poecilia_reticulata
ENSCSEG00000017661	si:ch211-11k18.4	100	86.031	ENSPNYG00000017099	si:ch211-11k18.4	100	86.253	Pundamilia_nyererei
ENSCSEG00000017661	si:ch211-11k18.4	99	59.778	ENSPNYG00000017266	si:dkey-98f17.5	100	58.444	Pundamilia_nyererei
ENSCSEG00000017661	si:ch211-11k18.4	99	59.292	ENSPNAG00000021352	si:dkey-98f17.5	100	58.889	Pygocentrus_nattereri
ENSCSEG00000017661	si:ch211-11k18.4	99	79.733	ENSPNAG00000022138	si:ch211-11k18.4	99	79.733	Pygocentrus_nattereri
ENSCSEG00000017661	si:ch211-11k18.4	99	57.616	ENSSFOG00015017965	si:dkey-98f17.5	100	57.556	Scleropages_formosus
ENSCSEG00000017661	si:ch211-11k18.4	99	75.056	ENSSFOG00015000985	si:ch211-11k18.4	94	75.056	Scleropages_formosus
ENSCSEG00000017661	si:ch211-11k18.4	100	84.701	ENSSMAG00000009651	si:ch211-11k18.4	100	84.701	Scophthalmus_maximus
ENSCSEG00000017661	si:ch211-11k18.4	99	58.667	ENSSMAG00000011905	si:dkey-98f17.5	100	57.556	Scophthalmus_maximus
ENSCSEG00000017661	si:ch211-11k18.4	100	85.588	ENSSDUG00000016411	si:ch211-11k18.4	100	85.588	Seriola_dumerili
ENSCSEG00000017661	si:ch211-11k18.4	98	59.775	ENSSDUG00000013457	si:dkey-98f17.5	99	58.876	Seriola_dumerili
ENSCSEG00000017661	si:ch211-11k18.4	100	85.366	ENSSLDG00000019145	si:ch211-11k18.4	100	85.366	Seriola_lalandi_dorsalis
ENSCSEG00000017661	si:ch211-11k18.4	98	59.326	ENSSLDG00000025395	si:dkey-98f17.5	99	58.652	Seriola_lalandi_dorsalis
ENSCSEG00000017661	si:ch211-11k18.4	87	64.721	ENSSPUG00000010096	-	99	64.721	Sphenodon_punctatus
ENSCSEG00000017661	si:ch211-11k18.4	100	85.366	ENSSPAG00000010697	si:ch211-11k18.4	100	85.366	Stegastes_partitus
ENSCSEG00000017661	si:ch211-11k18.4	99	60.000	ENSSPAG00000018800	si:dkey-98f17.5	100	59.111	Stegastes_partitus
ENSCSEG00000017661	si:ch211-11k18.4	99	58.889	ENSTRUG00000021287	si:dkey-98f17.5	100	58.444	Takifugu_rubripes
ENSCSEG00000017661	si:ch211-11k18.4	100	83.149	ENSTRUG00000020291	si:ch211-11k18.4	100	83.149	Takifugu_rubripes
ENSCSEG00000017661	si:ch211-11k18.4	99	66.372	ENSXETG00000031783	-	99	65.929	Xenopus_tropicalis
ENSCSEG00000017661	si:ch211-11k18.4	99	59.243	ENSXCOG00000017002	si:dkey-98f17.5	100	59.243	Xiphophorus_couchianus
ENSCSEG00000017661	si:ch211-11k18.4	100	82.045	ENSXCOG00000018094	si:ch211-11k18.4	100	82.045	Xiphophorus_couchianus
ENSCSEG00000017661	si:ch211-11k18.4	100	83.149	ENSXMAG00000021235	si:ch211-11k18.4	100	83.149	Xiphophorus_maculatus
ENSCSEG00000017661	si:ch211-11k18.4	99	58.889	ENSXMAG00000007688	si:dkey-98f17.5	95	58.889	Xiphophorus_maculatus