EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000017671 (Gene tree)
Gene ID: 103377215
Gene Symbol: gars (1 of many)
Alias: metronome|mrn|si:dkey-276i5.1|wu:fb02f03
Full Name: glycine--tRNA ligase
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 7670 bases
Position: chr3:10564868-10572537
Accession: 103377215
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000027671	HGTP_anticodon	PF03129.20	1.2e-21	1	1
ENSCSEP00000027671	tRNA-synt_2b	PF00587.25	2.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000028041	-	4381	XM_008307932	ENSCSEP00000027671	750 (aa)	XP_008306154	UPI000496991F

Gene Model

Click here to download ENSCSEG00000017671's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000017671's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000017671	gars	90	78.761	ENSCSEG00000017654	gars	98	78.761

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000017671	gars	92	86.023	ENSG00000106105	GARS	99	81.358	Homo_sapiens
ENSCSEG00000017671	gars	100	91.333	ENSAPOG00000019999	gars	100	91.333	Acanthochromis_polyacanthus
ENSCSEG00000017671	gars	90	82.794	ENSAPOG00000020089	gars	99	82.794	Acanthochromis_polyacanthus
ENSCSEG00000017671	gars	91	87.464	ENSAMEG00000006652	GARS	100	81.976	Ailuropoda_melanoleuca
ENSCSEG00000017671	gars	100	91.600	ENSACIG00000020744	gars	100	91.600	Amphilophus_citrinellus
ENSCSEG00000017671	gars	90	85.503	ENSACIG00000020797	gars	99	85.503	Amphilophus_citrinellus
ENSCSEG00000017671	gars	68	87.647	ENSAOCG00000002479	gars	100	87.647	Amphiprion_ocellaris
ENSCSEG00000017671	gars	100	92.400	ENSAOCG00000009108	gars	100	92.400	Amphiprion_ocellaris
ENSCSEG00000017671	gars	91	83.406	ENSAPEG00000018903	gars	100	83.406	Amphiprion_percula
ENSCSEG00000017671	gars	100	92.000	ENSAPEG00000018850	gars	100	92.000	Amphiprion_percula
ENSCSEG00000017671	gars	100	91.402	ENSATEG00000008784	gars	100	94.689	Anabas_testudineus
ENSCSEG00000017671	gars	62	89.440	ENSAPLG00000015638	-	100	89.440	Anas_platyrhynchos
ENSCSEG00000017671	gars	91	87.026	ENSACAG00000005601	GARS	100	87.026	Anolis_carolinensis
ENSCSEG00000017671	gars	91	87.591	ENSANAG00000022536	GARS	100	87.591	Aotus_nancymaae
ENSCSEG00000017671	gars	100	91.333	ENSACLG00000027174	gars	100	91.333	Astatotilapia_calliptera
ENSCSEG00000017671	gars	90	84.366	ENSACLG00000027158	gars	99	84.366	Astatotilapia_calliptera
ENSCSEG00000017671	gars	100	80.533	ENSAMXG00000014895	gars	96	91.122	Astyanax_mexicanus
ENSCSEG00000017671	gars	93	85.612	ENSBTAG00000018972	GARS	96	83.826	Bos_taurus
ENSCSEG00000017671	gars	90	57.589	WBGene00001744	gars-1	99	57.589	Caenorhabditis_elegans
ENSCSEG00000017671	gars	92	86.975	ENSCJAG00000008595	GARS	95	86.252	Callithrix_jacchus
ENSCSEG00000017671	gars	91	87.647	ENSCAFG00000003086	GARS	92	82.038	Canis_familiaris
ENSCSEG00000017671	gars	91	87.647	ENSCAFG00020004272	GARS	98	87.647	Canis_lupus_dingo
ENSCSEG00000017671	gars	95	83.404	ENSCHIG00000016912	GARS	100	87.500	Capra_hircus
ENSCSEG00000017671	gars	91	87.026	ENSTSYG00000008538	GARS	94	86.541	Carlito_syrichta
ENSCSEG00000017671	gars	83	68.829	ENSCAPG00000007526	GARS	100	68.829	Cavia_aperea
ENSCSEG00000017671	gars	90	85.926	ENSCPOG00000007547	GARS	99	81.553	Cavia_porcellus
ENSCSEG00000017671	gars	92	87.120	ENSCCAG00000011512	GARS	100	82.510	Cebus_capucinus
ENSCSEG00000017671	gars	92	86.831	ENSCATG00000036699	GARS	94	86.831	Cercocebus_atys
ENSCSEG00000017671	gars	91	86.735	ENSCLAG00000007985	GARS	96	86.735	Chinchilla_lanigera
ENSCSEG00000017671	gars	92	86.831	ENSCSAG00000014588	GARS	94	86.831	Chlorocebus_sabaeus
ENSCSEG00000017671	gars	91	74.927	ENSCHOG00000003253	GARS	92	74.927	Choloepus_hoffmanni
ENSCSEG00000017671	gars	89	88.191	ENSCPBG00000019482	GARS	92	88.191	Chrysemys_picta_bellii
ENSCSEG00000017671	gars	90	63.111	ENSCING00000008937	-	99	63.111	Ciona_intestinalis
ENSCSEG00000017671	gars	91	86.880	ENSCANG00000027727	GARS	99	81.867	Colobus_angolensis_palliatus
ENSCSEG00000017671	gars	93	86.143	ENSCGRG00001020450	Gars	96	85.551	Cricetulus_griseus_chok1gshd
ENSCSEG00000017671	gars	89	88.288	ENSCGRG00000008342	Gars	94	88.288	Cricetulus_griseus_crigri
ENSCSEG00000017671	gars	100	90.426	ENSCVAG00000007149	gars	99	90.426	Cyprinodon_variegatus
ENSCSEG00000017671	gars	92	92.151	ENSDARG00000059070	gars	99	92.151	Danio_rerio
ENSCSEG00000017671	gars	92	86.831	ENSDNOG00000046478	GARS	100	88.012	Dasypus_novemcinctus
ENSCSEG00000017671	gars	91	86.423	ENSDORG00000002672	Gars	97	84.203	Dipodomys_ordii
ENSCSEG00000017671	gars	90	61.037	FBgn0027088	GlyRS	99	61.037	Drosophila_melanogaster
ENSCSEG00000017671	gars	84	84.420	ENSETEG00000012196	GARS	98	84.420	Echinops_telfairi
ENSCSEG00000017671	gars	73	71.585	ENSEBUG00000002254	gars	100	71.585	Eptatretus_burgeri
ENSCSEG00000017671	gars	63	74.059	ENSEBUG00000002654	gars	86	74.059	Eptatretus_burgeri
ENSCSEG00000017671	gars	91	87.755	ENSEASG00005000388	GARS	93	87.755	Equus_asinus_asinus
ENSCSEG00000017671	gars	91	87.901	ENSECAG00000019373	GARS	93	87.901	Equus_caballus
ENSCSEG00000017671	gars	99	86.933	ENSELUG00000003692	gars	100	86.933	Esox_lucius
ENSCSEG00000017671	gars	92	86.975	ENSFCAG00000011415	GARS	82	86.975	Felis_catus
ENSCSEG00000017671	gars	82	88.636	ENSFALG00000006550	GARS	100	88.636	Ficedula_albicollis
ENSCSEG00000017671	gars	89	87.669	ENSFDAG00000014466	GARS	100	87.669	Fukomys_damarensis
ENSCSEG00000017671	gars	100	90.293	ENSFHEG00000013189	gars	99	90.293	Fundulus_heteroclitus
ENSCSEG00000017671	gars	83	79.487	ENSGMOG00000008856	-	100	79.487	Gadus_morhua
ENSCSEG00000017671	gars	99	84.913	ENSGMOG00000010728	gars	100	84.913	Gadus_morhua
ENSCSEG00000017671	gars	91	87.591	ENSGALG00000005694	GARS	100	87.591	Gallus_gallus
ENSCSEG00000017671	gars	100	90.280	ENSGAFG00000005228	gars	99	90.280	Gambusia_affinis
ENSCSEG00000017671	gars	99	89.333	ENSGACG00000003410	gars	100	89.333	Gasterosteus_aculeatus
ENSCSEG00000017671	gars	82	89.627	ENSGAGG00000017755	GARS	99	89.627	Gopherus_agassizii
ENSCSEG00000017671	gars	92	86.311	ENSGGOG00000004916	GARS	99	81.625	Gorilla_gorilla
ENSCSEG00000017671	gars	90	84.071	ENSHBUG00000000815	gars	99	84.071	Haplochromis_burtoni
ENSCSEG00000017671	gars	100	91.600	ENSHBUG00000016481	gars	100	91.600	Haplochromis_burtoni
ENSCSEG00000017671	gars	91	87.318	ENSHGLG00000016342	GARS	93	87.318	Heterocephalus_glaber_female
ENSCSEG00000017671	gars	91	86.589	ENSHGLG00100006787	GARS	97	86.589	Heterocephalus_glaber_male
ENSCSEG00000017671	gars	91	89.051	ENSHCOG00000005261	gars	100	89.051	Hippocampus_comes
ENSCSEG00000017671	gars	50	70.899	ENSHCOG00000005286	gars	96	70.899	Hippocampus_comes
ENSCSEG00000017671	gars	99	82.109	ENSIPUG00000011443	gars	100	82.109	Ictalurus_punctatus
ENSCSEG00000017671	gars	92	85.817	ENSSTOG00000015493	GARS	92	85.817	Ictidomys_tridecemlineatus
ENSCSEG00000017671	gars	91	86.006	ENSJJAG00000022474	Gars	99	86.006	Jaculus_jaculus
ENSCSEG00000017671	gars	100	89.110	ENSKMAG00000010428	gars	100	89.110	Kryptolebias_marmoratus
ENSCSEG00000017671	gars	99	91.333	ENSLBEG00000019228	gars	100	91.333	Labrus_bergylta
ENSCSEG00000017671	gars	52	82.216	ENSLBEG00000013122	-	100	82.216	Labrus_bergylta
ENSCSEG00000017671	gars	90	85.059	ENSLBEG00000019179	gars	100	85.059	Labrus_bergylta
ENSCSEG00000017671	gars	69	87.692	ENSLACG00000002810	GARS	100	87.692	Latimeria_chalumnae
ENSCSEG00000017671	gars	100	86.074	ENSLOCG00000009688	gars	99	86.074	Lepisosteus_oculatus
ENSCSEG00000017671	gars	99	81.067	ENSLAFG00000002496	GARS	99	85.610	Loxodonta_africana
ENSCSEG00000017671	gars	92	86.831	ENSMFAG00000038863	GARS	94	86.831	Macaca_fascicularis
ENSCSEG00000017671	gars	92	86.831	ENSMMUG00000004719	GARS	94	86.831	Macaca_mulatta
ENSCSEG00000017671	gars	91	80.758	ENSMNEG00000043203	GARS	93	80.318	Macaca_nemestrina
ENSCSEG00000017671	gars	92	86.975	ENSMLEG00000044430	GARS	94	86.975	Mandrillus_leucophaeus
ENSCSEG00000017671	gars	98	90.921	ENSMAMG00000001894	gars	99	93.103	Mastacembelus_armatus
ENSCSEG00000017671	gars	90	84.763	ENSMZEG00005019754	gars	100	84.763	Maylandia_zebra
ENSCSEG00000017671	gars	100	91.333	ENSMZEG00005019740	gars	100	91.333	Maylandia_zebra
ENSCSEG00000017671	gars	91	87.591	ENSMGAG00000003162	GARS	93	87.591	Meleagris_gallopavo
ENSCSEG00000017671	gars	97	83.584	ENSMAUG00000016852	Gars	99	83.584	Mesocricetus_auratus
ENSCSEG00000017671	gars	91	87.007	ENSMICG00000046006	GARS	100	87.007	Microcebus_murinus
ENSCSEG00000017671	gars	93	85.694	ENSMOCG00000017680	Gars	96	85.694	Microtus_ochrogaster
ENSCSEG00000017671	gars	99	87.234	ENSMMOG00000009695	gars	100	87.234	Mola_mola
ENSCSEG00000017671	gars	100	90.533	ENSMALG00000006592	gars	93	90.533	Monopterus_albus
ENSCSEG00000017671	gars	92	86.705	MGP_CAROLIEiJ_G0028410	Gars	95	86.705	Mus_caroli
ENSCSEG00000017671	gars	92	86.705	ENSMUSG00000029777	Gars	95	86.705	Mus_musculus
ENSCSEG00000017671	gars	97	82.877	MGP_PahariEiJ_G0022160	Gars	99	82.877	Mus_pahari
ENSCSEG00000017671	gars	92	86.705	MGP_SPRETEiJ_G0029412	Gars	99	87.121	Mus_spretus
ENSCSEG00000017671	gars	91	87.901	ENSMPUG00000005116	GARS	93	87.901	Mustela_putorius_furo
ENSCSEG00000017671	gars	91	87.172	ENSMLUG00000002043	GARS	93	87.172	Myotis_lucifugus
ENSCSEG00000017671	gars	91	87.135	ENSNGAG00000021844	Gars	94	87.007	Nannospalax_galili
ENSCSEG00000017671	gars	100	91.867	ENSNBRG00000018585	gars	100	91.867	Neolamprologus_brichardi
ENSCSEG00000017671	gars	52	83.290	ENSNBRG00000018643	gars	100	83.290	Neolamprologus_brichardi
ENSCSEG00000017671	gars	95	84.755	ENSNLEG00000015152	GARS	99	82.024	Nomascus_leucogenys
ENSCSEG00000017671	gars	89	78.464	ENSMEUG00000001741	GARS	100	78.464	Notamacropus_eugenii
ENSCSEG00000017671	gars	80	86.735	ENSOPRG00000005342	GARS	81	86.735	Ochotona_princeps
ENSCSEG00000017671	gars	91	85.818	ENSODEG00000008246	GARS	87	85.818	Octodon_degus
ENSCSEG00000017671	gars	89	82.388	ENSOANG00000006262	GARS	91	82.388	Ornithorhynchus_anatinus
ENSCSEG00000017671	gars	91	86.364	ENSOCUG00000005295	GARS	99	86.364	Oryctolagus_cuniculus
ENSCSEG00000017671	gars	100	86.853	ENSORLG00000009470	gars	100	86.853	Oryzias_latipes
ENSCSEG00000017671	gars	95	88.592	ENSORLG00020013036	gars	100	88.191	Oryzias_latipes_hni
ENSCSEG00000017671	gars	100	88.000	ENSORLG00015012886	gars	100	88.000	Oryzias_latipes_hsok
ENSCSEG00000017671	gars	52	80.203	ENSOMEG00000000133	gars	100	80.203	Oryzias_melastigma
ENSCSEG00000017671	gars	92	86.252	ENSOGAG00000013321	GARS	94	86.252	Otolemur_garnettii
ENSCSEG00000017671	gars	95	82.937	ENSOARG00000008017	GARS	97	82.937	Ovis_aries
ENSCSEG00000017671	gars	95	84.336	ENSPPAG00000037266	GARS	99	81.358	Pan_paniscus
ENSCSEG00000017671	gars	91	87.464	ENSPPRG00000001917	GARS	94	86.975	Panthera_pardus
ENSCSEG00000017671	gars	91	87.923	ENSPTIG00000016096	GARS	99	87.923	Panthera_tigris_altaica
ENSCSEG00000017671	gars	95	84.336	ENSPTRG00000019042	GARS	96	84.336	Pan_troglodytes
ENSCSEG00000017671	gars	92	86.975	ENSPANG00000026231	GARS	94	86.975	Papio_anubis
ENSCSEG00000017671	gars	99	85.447	ENSPKIG00000014863	gars	97	85.447	Paramormyrops_kingsleyae
ENSCSEG00000017671	gars	89	89.189	ENSPSIG00000010935	GARS	99	90.260	Pelodiscus_sinensis
ENSCSEG00000017671	gars	52	82.234	ENSPMGG00000023648	gars	99	82.234	Periophthalmus_magnuspinnatus
ENSCSEG00000017671	gars	100	85.020	ENSPMGG00000023644	gars	100	85.020	Periophthalmus_magnuspinnatus
ENSCSEG00000017671	gars	89	87.970	ENSPEMG00000019930	Gars	100	87.970	Peromyscus_maniculatus_bairdii
ENSCSEG00000017671	gars	90	76.867	ENSPMAG00000006586	gars	98	76.867	Petromyzon_marinus
ENSCSEG00000017671	gars	92	82.849	ENSPCIG00000017010	GARS	90	82.849	Phascolarctos_cinereus
ENSCSEG00000017671	gars	100	90.413	ENSPFOG00000004593	gars	99	90.413	Poecilia_formosa
ENSCSEG00000017671	gars	100	90.146	ENSPLAG00000008038	gars	99	90.146	Poecilia_latipinna
ENSCSEG00000017671	gars	100	90.546	ENSPMEG00000005901	gars	99	90.546	Poecilia_mexicana
ENSCSEG00000017671	gars	99	90.763	ENSPREG00000020960	gars	97	90.763	Poecilia_reticulata
ENSCSEG00000017671	gars	95	83.989	ENSPPYG00000017673	GARS	99	81.092	Pongo_abelii
ENSCSEG00000017671	gars	91	84.672	ENSPCAG00000007199	GARS	99	79.920	Procavia_capensis
ENSCSEG00000017671	gars	91	83.673	ENSPCOG00000008887	GARS	93	83.213	Propithecus_coquereli
ENSCSEG00000017671	gars	91	87.172	ENSPVAG00000013565	GARS	93	87.172	Pteropus_vampyrus
ENSCSEG00000017671	gars	90	84.218	ENSPNYG00000004960	gars	99	84.218	Pundamilia_nyererei
ENSCSEG00000017671	gars	100	91.200	ENSPNYG00000005017	gars	100	91.200	Pundamilia_nyererei
ENSCSEG00000017671	gars	94	88.636	ENSPNAG00000020164	gars	95	88.527	Pygocentrus_nattereri
ENSCSEG00000017671	gars	97	83.151	ENSRNOG00000011052	Gars	99	83.151	Rattus_norvegicus
ENSCSEG00000017671	gars	91	84.402	ENSRBIG00000040287	GARS	94	83.936	Rhinopithecus_bieti
ENSCSEG00000017671	gars	91	86.589	ENSRROG00000044600	GARS	94	86.107	Rhinopithecus_roxellana
ENSCSEG00000017671	gars	78	49.744	YPR081C	-	94	49.744	Saccharomyces_cerevisiae
ENSCSEG00000017671	gars	82	46.861	YBR121C	GRS1	98	47.473	Saccharomyces_cerevisiae
ENSCSEG00000017671	gars	92	86.541	ENSSBOG00000022287	GARS	100	81.976	Saimiri_boliviensis_boliviensis
ENSCSEG00000017671	gars	91	78.406	ENSSHAG00000003419	GARS	100	78.406	Sarcophilus_harrisii
ENSCSEG00000017671	gars	95	86.475	ENSSFOG00015000573	gars	100	84.334	Scleropages_formosus
ENSCSEG00000017671	gars	90	85.778	ENSSMAG00000013709	gars	99	85.778	Scophthalmus_maximus
ENSCSEG00000017671	gars	100	92.287	ENSSMAG00000013672	gars	100	92.287	Scophthalmus_maximus
ENSCSEG00000017671	gars	90	75.221	ENSSDUG00000016758	gars	100	75.221	Seriola_dumerili
ENSCSEG00000017671	gars	100	93.333	ENSSDUG00000016795	gars	100	93.333	Seriola_dumerili
ENSCSEG00000017671	gars	100	93.333	ENSSLDG00000014279	gars	100	93.333	Seriola_lalandi_dorsalis
ENSCSEG00000017671	gars	90	86.391	ENSSLDG00000014238	gars	100	86.391	Seriola_lalandi_dorsalis
ENSCSEG00000017671	gars	69	77.695	ENSSARG00000008410	GARS	82	77.695	Sorex_araneus
ENSCSEG00000017671	gars	91	87.830	ENSSPUG00000001815	-	92	87.482	Sphenodon_punctatus
ENSCSEG00000017671	gars	100	86.800	ENSSPAG00000012003	gars	99	86.800	Stegastes_partitus
ENSCSEG00000017671	gars	91	87.299	ENSSSCG00000016677	GARS	92	87.172	Sus_scrofa
ENSCSEG00000017671	gars	89	85.672	ENSTGUG00000000364	GARS	100	85.672	Taeniopygia_guttata
ENSCSEG00000017671	gars	99	88.533	ENSTRUG00000017557	gars	100	88.533	Takifugu_rubripes
ENSCSEG00000017671	gars	95	90.014	ENSTNIG00000012738	gars	99	90.014	Tetraodon_nigroviridis
ENSCSEG00000017671	gars	94	75.461	ENSTBEG00000008972	GARS	93	75.461	Tupaia_belangeri
ENSCSEG00000017671	gars	89	86.596	ENSTTRG00000000334	GARS	99	86.596	Tursiops_truncatus
ENSCSEG00000017671	gars	91	88.029	ENSUAMG00000016756	GARS	94	87.410	Ursus_americanus
ENSCSEG00000017671	gars	89	87.988	ENSUMAG00000002158	GARS	100	89.123	Ursus_maritimus
ENSCSEG00000017671	gars	92	79.539	ENSVPAG00000009438	GARS	98	77.778	Vicugna_pacos
ENSCSEG00000017671	gars	91	87.647	ENSVVUG00000020981	GARS	89	86.043	Vulpes_vulpes
ENSCSEG00000017671	gars	98	81.646	ENSXETG00000018474	gars	99	80.420	Xenopus_tropicalis
ENSCSEG00000017671	gars	100	89.007	ENSXCOG00000010005	gars	99	89.007	Xiphophorus_couchianus
ENSCSEG00000017671	gars	100	90.146	ENSXMAG00000009402	gars	98	90.146	Xiphophorus_maculatus