EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000017729 (Gene tree)
Gene ID: 103396095
Gene Symbol: GFI1
Alias: GFI-1|GFI1A|ZNF163
Full Name: zinc finger protein Gfi-1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 6419 bases
Position: chr20:4533738-4540156
Accession: 103396095
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000027745	zf-C2H2	PF00096.26	2.3e-25	1	6
ENSCSEP00000027745	zf-C2H2	PF00096.26	2.3e-25	2	6
ENSCSEP00000027745	zf-C2H2	PF00096.26	2.3e-25	3	6
ENSCSEP00000027745	zf-C2H2	PF00096.26	2.3e-25	4	6
ENSCSEP00000027745	zf-C2H2	PF00096.26	2.3e-25	5	6
ENSCSEP00000027745	zf-C2H2	PF00096.26	2.3e-25	6	6
ENSCSEP00000027745	zf-met	PF12874.7	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000028116	GFI1-201	5233	XM_008334053	ENSCSEP00000027745	397 (aa)	XP_008332275	UPI000495DB01

Gene Model

Click here to download ENSCSEG00000017729's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000017729's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000017729	GFI1	100	47.761	ENSCSEG00000001315	gfi1b	58	80.952
ENSCSEG00000017729	GFI1	53	42.647	ENSCSEG00000008539	-	68	42.647
ENSCSEG00000017729	GFI1	67	39.640	ENSCSEG00000012389	znf646	50	41.905
ENSCSEG00000017729	GFI1	54	45.679	ENSCSEG00000001771	-	67	45.679
ENSCSEG00000017729	GFI1	53	42.038	ENSCSEG00000018535	-	99	42.038
ENSCSEG00000017729	GFI1	51	42.424	ENSCSEG00000005983	-	89	42.424
ENSCSEG00000017729	GFI1	59	40.964	ENSCSEG00000020730	-	96	40.964
ENSCSEG00000017729	GFI1	55	47.297	ENSCSEG00000011586	znf236	73	40.816

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000017729	GFI1	100	57.014	ENSG00000162676	GFI1	100	57.339	Homo_sapiens
ENSCSEG00000017729	GFI1	100	63.659	ENSAPOG00000015189	gfi1ab	100	63.659	Acanthochromis_polyacanthus
ENSCSEG00000017729	GFI1	100	63.000	ENSACIG00000016354	gfi1ab	100	62.750	Amphilophus_citrinellus
ENSCSEG00000017729	GFI1	100	54.637	ENSAOCG00000008339	gfi1ab	100	54.386	Amphiprion_ocellaris
ENSCSEG00000017729	GFI1	100	63.910	ENSAPEG00000023870	gfi1ab	100	63.910	Amphiprion_percula
ENSCSEG00000017729	GFI1	100	57.895	ENSATEG00000009167	gfi1ab	89	57.855	Anabas_testudineus
ENSCSEG00000017729	GFI1	86	61.080	ENSAPLG00000015700	GFI1	99	60.282	Anas_platyrhynchos
ENSCSEG00000017729	GFI1	100	60.680	ENSACAG00000004498	GFI1	100	60.922	Anolis_carolinensis
ENSCSEG00000017729	GFI1	100	58.676	ENSANAG00000019656	GFI1	100	58.676	Aotus_nancymaae
ENSCSEG00000017729	GFI1	100	64.000	ENSACLG00000026458	gfi1ab	93	63.750	Astatotilapia_calliptera
ENSCSEG00000017729	GFI1	100	62.283	ENSAMXG00000039600	gfi1ab	100	60.599	Astyanax_mexicanus
ENSCSEG00000017729	GFI1	100	38.931	ENSAMXG00000015228	-	51	65.031	Astyanax_mexicanus
ENSCSEG00000017729	GFI1	100	53.518	ENSAMXG00000006669	GFI1	88	62.034	Astyanax_mexicanus
ENSCSEG00000017729	GFI1	100	58.782	ENSBTAG00000016723	GFI1	100	58.782	Bos_taurus
ENSCSEG00000017729	GFI1	100	57.991	ENSCJAG00000017609	GFI1	100	57.991	Callithrix_jacchus
ENSCSEG00000017729	GFI1	100	57.931	ENSCAFG00000020155	GFI1	100	58.741	Canis_familiaris
ENSCSEG00000017729	GFI1	100	57.931	ENSCAFG00020013371	GFI1	88	58.741	Canis_lupus_dingo
ENSCSEG00000017729	GFI1	100	58.782	ENSCHIG00000016135	GFI1	100	58.782	Capra_hircus
ENSCSEG00000017729	GFI1	100	55.809	ENSCPOG00000011727	GFI1	100	57.576	Cavia_porcellus
ENSCSEG00000017729	GFI1	100	57.763	ENSCCAG00000036072	GFI1	100	57.763	Cebus_capucinus
ENSCSEG00000017729	GFI1	100	57.931	ENSCATG00000037873	GFI1	100	58.275	Cercocebus_atys
ENSCSEG00000017729	GFI1	100	60.837	ENSCLAG00000005915	GFI1	100	55.809	Chinchilla_lanigera
ENSCSEG00000017729	GFI1	99	51.459	ENSCSAG00000001469	GFI1	100	51.882	Chlorocebus_sabaeus
ENSCSEG00000017729	GFI1	100	56.912	ENSCANG00000034077	GFI1	100	58.042	Colobus_angolensis_palliatus
ENSCSEG00000017729	GFI1	100	57.506	ENSCGRG00001015432	Gfi1	100	57.506	Cricetulus_griseus_chok1gshd
ENSCSEG00000017729	GFI1	100	61.845	ENSCVAG00000011828	gfi1ab	100	61.596	Cyprinodon_variegatus
ENSCSEG00000017729	GFI1	100	71.290	ENSCVAG00000004930	GFI1	100	70.803	Cyprinodon_variegatus
ENSCSEG00000017729	GFI1	100	66.667	ENSDARG00000044457	gfi1ab	100	66.667	Danio_rerio
ENSCSEG00000017729	GFI1	100	57.931	ENSDNOG00000000782	GFI1	97	59.302	Dasypus_novemcinctus
ENSCSEG00000017729	GFI1	100	57.931	ENSEASG00005015509	GFI1	86	60.000	Equus_asinus_asinus
ENSCSEG00000017729	GFI1	98	50.251	ENSECAG00000006647	GFI1	92	51.531	Equus_caballus
ENSCSEG00000017729	GFI1	100	57.576	ENSEEUG00000000198	GFI1	100	57.576	Erinaceus_europaeus
ENSCSEG00000017729	GFI1	100	65.842	ENSELUG00000019033	GFI1	100	65.842	Esox_lucius
ENSCSEG00000017729	GFI1	100	64.128	ENSELUG00000003015	gfi1ab	99	63.882	Esox_lucius
ENSCSEG00000017729	GFI1	100	57.931	ENSFCAG00000005914	GFI1	100	58.508	Felis_catus
ENSCSEG00000017729	GFI1	100	74.074	ENSFHEG00000000341	GFI1	100	74.074	Fundulus_heteroclitus
ENSCSEG00000017729	GFI1	100	61.000	ENSFHEG00000010997	gfi1ab	100	61.000	Fundulus_heteroclitus
ENSCSEG00000017729	GFI1	100	61.250	ENSGMOG00000007737	gfi1ab	100	61.654	Gadus_morhua
ENSCSEG00000017729	GFI1	100	60.145	ENSGALG00000043650	GFI1	100	60.145	Gallus_gallus
ENSCSEG00000017729	GFI1	100	70.833	ENSGAFG00000018063	GFI1	100	73.284	Gambusia_affinis
ENSCSEG00000017729	GFI1	100	61.596	ENSGAFG00000016637	gfi1ab	100	61.347	Gambusia_affinis
ENSCSEG00000017729	GFI1	100	62.312	ENSGACG00000004257	gfi1ab	97	62.312	Gasterosteus_aculeatus
ENSCSEG00000017729	GFI1	100	57.014	ENSGGOG00000005320	GFI1	100	57.339	Gorilla_gorilla
ENSCSEG00000017729	GFI1	100	63.158	ENSHBUG00000011969	gfi1ab	100	62.907	Haplochromis_burtoni
ENSCSEG00000017729	GFI1	100	58.451	ENSHGLG00000008020	GFI1	100	58.685	Heterocephalus_glaber_female
ENSCSEG00000017729	GFI1	100	58.451	ENSHGLG00100000610	GFI1	100	58.685	Heterocephalus_glaber_male
ENSCSEG00000017729	GFI1	100	71.642	ENSHCOG00000019555	GFI1	100	71.322	Hippocampus_comes
ENSCSEG00000017729	GFI1	100	54.137	ENSHCOG00000008590	gfi1ab	100	53.901	Hippocampus_comes
ENSCSEG00000017729	GFI1	100	61.809	ENSIPUG00000010071	gfi1ab	87	61.809	Ictalurus_punctatus
ENSCSEG00000017729	GFI1	100	61.000	ENSIPUG00000013414	GFI1	100	61.000	Ictalurus_punctatus
ENSCSEG00000017729	GFI1	100	57.737	ENSSTOG00000014583	GFI1	100	59.624	Ictidomys_tridecemlineatus
ENSCSEG00000017729	GFI1	100	61.845	ENSKMAG00000003810	gfi1ab	100	61.596	Kryptolebias_marmoratus
ENSCSEG00000017729	GFI1	100	62.155	ENSLBEG00000027776	gfi1ab	100	62.000	Labrus_bergylta
ENSCSEG00000017729	GFI1	100	63.636	ENSLACG00000013362	GFI1	98	63.636	Latimeria_chalumnae
ENSCSEG00000017729	GFI1	99	74.595	ENSLACG00000017590	-	56	75.000	Latimeria_chalumnae
ENSCSEG00000017729	GFI1	100	64.268	ENSLOCG00000004711	gfi1ab	100	64.764	Lepisosteus_oculatus
ENSCSEG00000017729	GFI1	100	59.005	ENSLAFG00000018346	GFI1	100	59.135	Loxodonta_africana
ENSCSEG00000017729	GFI1	100	57.931	ENSMFAG00000045801	GFI1	100	58.275	Macaca_fascicularis
ENSCSEG00000017729	GFI1	100	57.931	ENSMNEG00000036338	GFI1	100	58.275	Macaca_nemestrina
ENSCSEG00000017729	GFI1	100	57.931	ENSMLEG00000036181	GFI1	100	58.275	Mandrillus_leucophaeus
ENSCSEG00000017729	GFI1	100	62.907	ENSMAMG00000008125	gfi1ab	100	62.657	Mastacembelus_armatus
ENSCSEG00000017729	GFI1	100	64.000	ENSMZEG00005009895	gfi1ab	100	63.750	Maylandia_zebra
ENSCSEG00000017729	GFI1	86	62.500	ENSMGAG00000008187	GFI1	99	62.500	Meleagris_gallopavo
ENSCSEG00000017729	GFI1	100	56.787	ENSMICG00000047208	GFI1	100	57.339	Microcebus_murinus
ENSCSEG00000017729	GFI1	100	59.750	ENSMMOG00000005556	gfi1ab	100	59.500	Mola_mola
ENSCSEG00000017729	GFI1	100	59.080	ENSMODG00000011802	GFI1	100	59.310	Monodelphis_domestica
ENSCSEG00000017729	GFI1	100	60.902	ENSMALG00000014672	gfi1ab	100	60.652	Monopterus_albus
ENSCSEG00000017729	GFI1	100	57.175	MGP_CAROLIEiJ_G0027508	Gfi1	100	96.296	Mus_caroli
ENSCSEG00000017729	GFI1	100	57.241	ENSMUSG00000029275	Gfi1	100	57.110	Mus_musculus
ENSCSEG00000017729	GFI1	100	57.175	MGP_PahariEiJ_G0017280	Gfi1	100	96.296	Mus_pahari
ENSCSEG00000017729	GFI1	100	55.909	MGP_SPRETEiJ_G0028507	Gfi1	100	57.471	Mus_spretus
ENSCSEG00000017729	GFI1	100	61.750	ENSMPUG00000004178	GFI1	97	61.750	Mustela_putorius_furo
ENSCSEG00000017729	GFI1	100	57.506	ENSMLUG00000015191	GFI1	97	57.611	Myotis_lucifugus
ENSCSEG00000017729	GFI1	100	63.457	ENSNBRG00000015774	gfi1ab	100	63.210	Neolamprologus_brichardi
ENSCSEG00000017729	GFI1	87	59.791	ENSNLEG00000010470	GFI1	92	60.267	Nomascus_leucogenys
ENSCSEG00000017729	GFI1	100	57.339	ENSOPRG00000001473	GFI1	100	57.798	Ochotona_princeps
ENSCSEG00000017729	GFI1	100	64.000	ENSONIG00000019246	gfi1ab	100	63.750	Oreochromis_niloticus
ENSCSEG00000017729	GFI1	98	51.579	ENSOCUG00000023553	GFI1	93	51.451	Oryctolagus_cuniculus
ENSCSEG00000017729	GFI1	100	74.378	ENSORLG00000005060	GFI1	100	74.378	Oryzias_latipes
ENSCSEG00000017729	GFI1	100	60.599	ENSORLG00000013806	gfi1ab	100	60.349	Oryzias_latipes
ENSCSEG00000017729	GFI1	100	60.848	ENSORLG00020001602	gfi1ab	100	60.599	Oryzias_latipes_hni
ENSCSEG00000017729	GFI1	100	64.736	ENSORLG00020002817	GFI1	100	64.736	Oryzias_latipes_hni
ENSCSEG00000017729	GFI1	100	74.000	ENSORLG00015006070	GFI1	100	74.000	Oryzias_latipes_hsok
ENSCSEG00000017729	GFI1	100	72.500	ENSOMEG00000016722	GFI1	100	72.500	Oryzias_melastigma
ENSCSEG00000017729	GFI1	100	59.559	ENSOGAG00000027913	GFI1	100	59.559	Otolemur_garnettii
ENSCSEG00000017729	GFI1	98	93.333	ENSOARG00000016329	GFI1	94	51.312	Ovis_aries
ENSCSEG00000017729	GFI1	100	59.459	ENSPPAG00000042186	GFI1	100	59.459	Pan_paniscus
ENSCSEG00000017729	GFI1	100	57.931	ENSPPRG00000007521	GFI1	100	58.508	Panthera_pardus
ENSCSEG00000017729	GFI1	100	56.236	ENSPTRG00000043053	GFI1	100	57.339	Pan_troglodytes
ENSCSEG00000017729	GFI1	100	57.931	ENSPANG00000016433	GFI1	100	58.275	Papio_anubis
ENSCSEG00000017729	GFI1	100	65.764	ENSPKIG00000004263	GFI1	100	65.517	Paramormyrops_kingsleyae
ENSCSEG00000017729	GFI1	86	64.672	ENSPSIG00000008734	GFI1	96	64.672	Pelodiscus_sinensis
ENSCSEG00000017729	GFI1	99	56.818	ENSPMGG00000011041	GFI1	99	56.675	Periophthalmus_magnuspinnatus
ENSCSEG00000017729	GFI1	100	62.250	ENSPMGG00000012546	gfi1ab	100	62.250	Periophthalmus_magnuspinnatus
ENSCSEG00000017729	GFI1	100	60.748	ENSPCIG00000013728	GFI1	100	60.748	Phascolarctos_cinereus
ENSCSEG00000017729	GFI1	100	61.596	ENSPFOG00000023214	gfi1ab	100	61.347	Poecilia_formosa
ENSCSEG00000017729	GFI1	100	74.328	ENSPLAG00000005376	GFI1	91	74.328	Poecilia_latipinna
ENSCSEG00000017729	GFI1	100	61.596	ENSPLAG00000010879	gfi1ab	100	64.000	Poecilia_latipinna
ENSCSEG00000017729	GFI1	100	75.309	ENSPMEG00000019299	GFI1	100	75.309	Poecilia_mexicana
ENSCSEG00000017729	GFI1	100	61.845	ENSPMEG00000013694	gfi1ab	100	61.596	Poecilia_mexicana
ENSCSEG00000017729	GFI1	100	65.468	ENSPREG00000007997	GFI1	100	65.468	Poecilia_reticulata
ENSCSEG00000017729	GFI1	100	61.845	ENSPREG00000014097	gfi1ab	100	61.596	Poecilia_reticulata
ENSCSEG00000017729	GFI1	100	47.685	ENSPCAG00000011020	GFI1	100	47.685	Procavia_capensis
ENSCSEG00000017729	GFI1	100	58.447	ENSPCOG00000020540	GFI1	100	59.259	Propithecus_coquereli
ENSCSEG00000017729	GFI1	100	57.907	ENSPVAG00000006928	GFI1	100	59.905	Pteropus_vampyrus
ENSCSEG00000017729	GFI1	100	64.000	ENSPNYG00000021183	gfi1ab	100	63.750	Pundamilia_nyererei
ENSCSEG00000017729	GFI1	100	60.652	ENSPNAG00000028014	GFI1	100	59.799	Pygocentrus_nattereri
ENSCSEG00000017729	GFI1	100	62.250	ENSPNAG00000027258	gfi1ab	100	61.194	Pygocentrus_nattereri
ENSCSEG00000017729	GFI1	100	56.813	ENSRNOG00000002042	Gfi1	100	56.621	Rattus_norvegicus
ENSCSEG00000017729	GFI1	100	57.931	ENSRBIG00000036467	GFI1	100	58.275	Rhinopithecus_bieti
ENSCSEG00000017729	GFI1	100	57.931	ENSRROG00000031687	GFI1	100	58.275	Rhinopithecus_roxellana
ENSCSEG00000017729	GFI1	100	57.207	ENSSBOG00000031300	GFI1	100	58.933	Saimiri_boliviensis_boliviensis
ENSCSEG00000017729	GFI1	100	65.174	ENSSFOG00015020295	gfi1	100	64.925	Scleropages_formosus
ENSCSEG00000017729	GFI1	99	57.018	ENSSFOG00015008114	-	52	63.690	Scleropages_formosus
ENSCSEG00000017729	GFI1	100	62.155	ENSSMAG00000002782	gfi1ab	100	61.905	Scophthalmus_maximus
ENSCSEG00000017729	GFI1	100	60.804	ENSSDUG00000022410	gfi1ab	100	60.804	Seriola_dumerili
ENSCSEG00000017729	GFI1	100	61.055	ENSSLDG00000020163	gfi1ab	100	61.055	Seriola_lalandi_dorsalis
ENSCSEG00000017729	GFI1	80	75.758	ENSSPAG00000009140	gfi1ab	99	78.125	Stegastes_partitus
ENSCSEG00000017729	GFI1	100	59.338	ENSSSCG00000006902	GFI1	100	59.338	Sus_scrofa
ENSCSEG00000017729	GFI1	86	63.248	ENSTGUG00000006060	GFI1	93	65.559	Taeniopygia_guttata
ENSCSEG00000017729	GFI1	100	60.902	ENSTRUG00000000415	gfi1ab	100	60.652	Takifugu_rubripes
ENSCSEG00000017729	GFI1	100	60.150	ENSTNIG00000000651	gfi1ab	97	59.653	Tetraodon_nigroviridis
ENSCSEG00000017729	GFI1	100	58.782	ENSTTRG00000000082	GFI1	100	58.782	Tursiops_truncatus
ENSCSEG00000017729	GFI1	100	60.382	ENSUAMG00000021124	GFI1	91	60.382	Ursus_americanus
ENSCSEG00000017729	GFI1	100	59.951	ENSXETG00000023006	gfi1	98	58.134	Xenopus_tropicalis
ENSCSEG00000017729	GFI1	100	65.909	ENSXMAG00000009274	GFI1	70	69.034	Xiphophorus_maculatus
ENSCSEG00000017729	GFI1	50	54.359	ENSXMAG00000006527	-	60	54.359	Xiphophorus_maculatus
ENSCSEG00000017729	GFI1	100	61.905	ENSXMAG00000010523	gfi1ab	100	61.654	Xiphophorus_maculatus