EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000017770 (Gene tree)
Gene ID: 103381975
Gene Symbol: eif3c
Alias: eif3s8|fi37c04|wu:fb34a08|wu:fi37c04|zgc:66128
Full Name: eukaryotic translation initiation factor 3 subunit C
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 12115 bases
Position: chr8:9657913-9670027
Accession: 103381975
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000027831	eIF-3c_N	PF05470.12	4.1e-249	1	1
ENSCSEP00000027846	eIF-3c_N	PF05470.12	1.7e-243	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000028206	-	3624	XM_008314607	ENSCSEP00000027831	926 (aa)	XP_008312829	UPI0004962D7F
ENSCSET00000028221	-	2727	-	ENSCSEP00000027846	908 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000017770's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000017770's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000017770	eif3c	100	74.267	ENSG00000205609	EIF3CL	100	73.828	Homo_sapiens
ENSCSEG00000017770	eif3c	100	74.672	ENSG00000184110	EIF3C	100	84.810	Homo_sapiens
ENSCSEG00000017770	eif3c	100	91.837	ENSAPOG00000024092	eif3c	100	92.052	Acanthochromis_polyacanthus
ENSCSEG00000017770	eif3c	100	75.218	ENSAMEG00000015454	-	100	75.109	Ailuropoda_melanoleuca
ENSCSEG00000017770	eif3c	100	83.388	ENSACIG00000015082	eif3c	100	83.913	Amphilophus_citrinellus
ENSCSEG00000017770	eif3c	100	92.266	ENSAOCG00000021466	eif3c	100	92.696	Amphiprion_ocellaris
ENSCSEG00000017770	eif3c	100	92.266	ENSAPEG00000010521	eif3c	100	92.696	Amphiprion_percula
ENSCSEG00000017770	eif3c	100	91.845	ENSATEG00000019001	eif3c	100	92.597	Anabas_testudineus
ENSCSEG00000017770	eif3c	100	77.268	ENSACAG00000005937	-	100	77.268	Anolis_carolinensis
ENSCSEG00000017770	eif3c	100	74.563	ENSANAG00000020640	-	100	74.454	Aotus_nancymaae
ENSCSEG00000017770	eif3c	86	91.248	ENSACLG00000009322	eif3c	93	91.680	Astatotilapia_calliptera
ENSCSEG00000017770	eif3c	86	94.089	ENSACLG00000009347	eif3c	95	93.750	Astatotilapia_calliptera
ENSCSEG00000017770	eif3c	100	84.722	ENSAMXG00000020949	eif3c	100	84.829	Astyanax_mexicanus
ENSCSEG00000017770	eif3c	100	74.236	ENSBTAG00000006543	EIF3CL	99	75.490	Bos_taurus
ENSCSEG00000017770	eif3c	99	42.418	WBGene00001226	eif-3.C	67	46.105	Caenorhabditis_elegans
ENSCSEG00000017770	eif3c	100	74.672	ENSCJAG00000006341	-	100	76.839	Callithrix_jacchus
ENSCSEG00000017770	eif3c	100	75.218	ENSCAFG00000017143	-	100	75.109	Canis_familiaris
ENSCSEG00000017770	eif3c	100	75.218	ENSCAFG00020017587	-	100	75.109	Canis_lupus_dingo
ENSCSEG00000017770	eif3c	100	74.454	ENSCHIG00000024795	-	99	75.708	Capra_hircus
ENSCSEG00000017770	eif3c	100	74.672	ENSTSYG00000003486	-	100	74.563	Carlito_syrichta
ENSCSEG00000017770	eif3c	96	68.558	ENSCAPG00000015887	-	99	68.899	Cavia_aperea
ENSCSEG00000017770	eif3c	100	74.672	ENSCPOG00000007533	-	100	74.672	Cavia_porcellus
ENSCSEG00000017770	eif3c	100	70.403	ENSCCAG00000027724	-	100	69.314	Cebus_capucinus
ENSCSEG00000017770	eif3c	100	74.208	ENSCCAG00000034928	-	100	74.098	Cebus_capucinus
ENSCSEG00000017770	eif3c	99	64.120	ENSCCAG00000029099	-	99	62.732	Cebus_capucinus
ENSCSEG00000017770	eif3c	100	74.672	ENSCATG00000032673	-	100	74.563	Cercocebus_atys
ENSCSEG00000017770	eif3c	100	74.728	ENSCLAG00000011094	-	100	74.672	Chinchilla_lanigera
ENSCSEG00000017770	eif3c	100	74.672	ENSCSAG00000006297	-	100	74.563	Chlorocebus_sabaeus
ENSCSEG00000017770	eif3c	55	67.568	ENSCHOG00000003120	-	88	67.568	Choloepus_hoffmanni
ENSCSEG00000017770	eif3c	73	86.624	ENSCPBG00000012407	-	95	72.253	Chrysemys_picta_bellii
ENSCSEG00000017770	eif3c	77	54.701	ENSCSAVG00000006744	-	90	55.439	Ciona_savignyi
ENSCSEG00000017770	eif3c	100	74.672	ENSCANG00000033626	-	100	74.563	Colobus_angolensis_palliatus
ENSCSEG00000017770	eif3c	100	74.208	ENSCGRG00001015265	EIF3C	100	74.317	Cricetulus_griseus_chok1gshd
ENSCSEG00000017770	eif3c	100	89.655	ENSCVAG00000005402	eif3c	100	89.763	Cyprinodon_variegatus
ENSCSEG00000017770	eif3c	100	86.710	ENSDARG00000016443	eif3c	100	86.924	Danio_rerio
ENSCSEG00000017770	eif3c	100	75.000	ENSDNOG00000031497	-	100	75.000	Dasypus_novemcinctus
ENSCSEG00000017770	eif3c	100	74.672	ENSDORG00000016471	Eif3c	100	74.672	Dipodomys_ordii
ENSCSEG00000017770	eif3c	98	51.549	FBgn0034258	eIF3c	97	51.965	Drosophila_melanogaster
ENSCSEG00000017770	eif3c	92	83.105	ENSETEG00000013527	-	92	83.105	Echinops_telfairi
ENSCSEG00000017770	eif3c	99	64.263	ENSEBUG00000001629	eif3c	99	64.440	Eptatretus_burgeri
ENSCSEG00000017770	eif3c	100	74.891	ENSECAG00000008746	-	100	74.782	Equus_caballus
ENSCSEG00000017770	eif3c	62	54.770	ENSEEUG00000000726	-	64	54.174	Erinaceus_europaeus
ENSCSEG00000017770	eif3c	87	74.718	ENSEEUG00000006148	-	99	75.467	Erinaceus_europaeus
ENSCSEG00000017770	eif3c	100	83.864	ENSELUG00000022257	eif3c	92	93.355	Esox_lucius
ENSCSEG00000017770	eif3c	100	75.109	ENSFCAG00000015782	-	100	75.109	Felis_catus
ENSCSEG00000017770	eif3c	100	74.891	ENSFDAG00000003588	-	100	74.891	Fukomys_damarensis
ENSCSEG00000017770	eif3c	100	90.323	ENSFHEG00000014154	EIF3C	100	89.677	Fundulus_heteroclitus
ENSCSEG00000017770	eif3c	96	88.117	ENSGMOG00000016885	eif3c	100	88.229	Gadus_morhua
ENSCSEG00000017770	eif3c	95	88.788	ENSGACG00000007652	eif3c	100	87.634	Gasterosteus_aculeatus
ENSCSEG00000017770	eif3c	93	75.089	ENSGAGG00000006666	-	100	75.326	Gopherus_agassizii
ENSCSEG00000017770	eif3c	99	73.516	ENSGGOG00000026919	EIF3C	99	75.878	Gorilla_gorilla
ENSCSEG00000017770	eif3c	100	75.328	ENSHGLG00000011445	EIF3C	100	75.000	Heterocephalus_glaber_female
ENSCSEG00000017770	eif3c	100	75.328	ENSHGLG00100000217	EIF3C	100	75.000	Heterocephalus_glaber_male
ENSCSEG00000017770	eif3c	100	88.793	ENSHCOG00000019694	eif3c	100	88.901	Hippocampus_comes
ENSCSEG00000017770	eif3c	99	84.509	ENSIPUG00000016878	eif3c	99	84.722	Ictalurus_punctatus
ENSCSEG00000017770	eif3c	100	74.891	ENSSTOG00000021278	-	100	74.782	Ictidomys_tridecemlineatus
ENSCSEG00000017770	eif3c	100	73.224	ENSJJAG00000012722	Eif3c	100	73.908	Jaculus_jaculus
ENSCSEG00000017770	eif3c	98	89.659	ENSKMAG00000021662	eif3c	100	87.792	Kryptolebias_marmoratus
ENSCSEG00000017770	eif3c	100	89.559	ENSLBEG00000023370	eif3c	100	90.097	Labrus_bergylta
ENSCSEG00000017770	eif3c	99	78.587	ENSLACG00000000770	eif3c	99	79.605	Latimeria_chalumnae
ENSCSEG00000017770	eif3c	100	74.891	ENSLAFG00000027426	-	100	74.782	Loxodonta_africana
ENSCSEG00000017770	eif3c	100	74.672	ENSMFAG00000041930	-	100	74.563	Macaca_fascicularis
ENSCSEG00000017770	eif3c	100	74.672	ENSMMUG00000011798	-	100	74.563	Macaca_mulatta
ENSCSEG00000017770	eif3c	100	74.672	ENSMNEG00000023915	-	100	74.563	Macaca_nemestrina
ENSCSEG00000017770	eif3c	100	74.672	ENSMLEG00000027529	-	100	74.563	Mandrillus_leucophaeus
ENSCSEG00000017770	eif3c	100	91.407	ENSMAMG00000012512	eif3c	100	91.192	Mastacembelus_armatus
ENSCSEG00000017770	eif3c	86	91.086	ENSMZEG00005013685	eif3c	93	91.086	Maylandia_zebra
ENSCSEG00000017770	eif3c	100	82.637	ENSMZEG00005013699	eif3c	95	93.750	Maylandia_zebra
ENSCSEG00000017770	eif3c	100	73.880	ENSMAUG00000010621	Eif3c	100	74.317	Mesocricetus_auratus
ENSCSEG00000017770	eif3c	100	75.109	ENSMICG00000036748	-	100	75.109	Microcebus_murinus
ENSCSEG00000017770	eif3c	100	72.896	ENSMOCG00000004204	Eif3c	100	73.115	Microtus_ochrogaster
ENSCSEG00000017770	eif3c	100	83.278	ENSMMOG00000001572	eif3c	100	82.068	Mola_mola
ENSCSEG00000017770	eif3c	100	74.401	ENSMODG00000015579	-	100	74.863	Monodelphis_domestica
ENSCSEG00000017770	eif3c	92	92.453	ENSMALG00000008907	eif3c	98	92.500	Monopterus_albus
ENSCSEG00000017770	eif3c	100	73.989	MGP_CAROLIEiJ_G0030451	Eif3c	100	73.880	Mus_caroli
ENSCSEG00000017770	eif3c	100	73.989	ENSMUSG00000030738	Eif3c	100	73.880	Mus_musculus
ENSCSEG00000017770	eif3c	100	73.115	MGP_PahariEiJ_G0013661	Eif3c	100	73.224	Mus_pahari
ENSCSEG00000017770	eif3c	100	73.989	MGP_SPRETEiJ_G0031565	Eif3c	100	73.880	Mus_spretus
ENSCSEG00000017770	eif3c	97	75.538	ENSMPUG00000012732	-	99	76.217	Mustela_putorius_furo
ENSCSEG00000017770	eif3c	100	73.993	ENSMLUG00000015558	-	100	74.672	Myotis_lucifugus
ENSCSEG00000017770	eif3c	67	63.518	ENSNGAG00000010901	-	76	63.889	Nannospalax_galili
ENSCSEG00000017770	eif3c	100	74.563	ENSNGAG00000007177	-	100	74.563	Nannospalax_galili
ENSCSEG00000017770	eif3c	100	65.491	ENSNLEG00000001425	-	100	65.696	Nomascus_leucogenys
ENSCSEG00000017770	eif3c	83	66.019	ENSMEUG00000005317	-	94	63.636	Notamacropus_eugenii
ENSCSEG00000017770	eif3c	100	62.377	ENSMEUG00000009939	-	99	63.169	Notamacropus_eugenii
ENSCSEG00000017770	eif3c	100	74.563	ENSOPRG00000000931	-	100	74.782	Ochotona_princeps
ENSCSEG00000017770	eif3c	100	74.429	ENSODEG00000013508	-	100	74.782	Octodon_degus
ENSCSEG00000017770	eif3c	67	71.475	ENSONIG00000011434	eif3c	100	71.475	Oreochromis_niloticus
ENSCSEG00000017770	eif3c	100	71.215	ENSOANG00000011410	-	100	71.855	Ornithorhynchus_anatinus
ENSCSEG00000017770	eif3c	100	75.218	ENSOCUG00000022489	-	100	75.109	Oryctolagus_cuniculus
ENSCSEG00000017770	eif3c	99	86.874	ENSORLG00000006318	eif3c	100	85.521	Oryzias_latipes
ENSCSEG00000017770	eif3c	99	86.874	ENSORLG00020015713	eif3c	100	86.603	Oryzias_latipes_hni
ENSCSEG00000017770	eif3c	99	86.652	ENSORLG00015013772	eif3c	100	86.938	Oryzias_latipes_hsok
ENSCSEG00000017770	eif3c	100	87.863	ENSOMEG00000020450	eif3c	100	88.280	Oryzias_melastigma
ENSCSEG00000017770	eif3c	100	74.891	ENSOGAG00000012737	-	100	74.891	Otolemur_garnettii
ENSCSEG00000017770	eif3c	100	74.454	ENSOARG00000002892	-	99	75.708	Ovis_aries
ENSCSEG00000017770	eif3c	100	75.109	ENSPPRG00000012336	-	100	75.109	Panthera_pardus
ENSCSEG00000017770	eif3c	100	75.109	ENSPTIG00000011712	-	100	75.109	Panthera_tigris_altaica
ENSCSEG00000017770	eif3c	100	74.672	ENSPANG00000021151	-	100	74.563	Papio_anubis
ENSCSEG00000017770	eif3c	100	85.470	ENSPKIG00000002049	eif3c	100	85.241	Paramormyrops_kingsleyae
ENSCSEG00000017770	eif3c	90	96.173	ENSPMGG00000005409	eif3c	100	84.649	Periophthalmus_magnuspinnatus
ENSCSEG00000017770	eif3c	100	74.208	ENSPEMG00000010899	Eif3c	100	73.661	Peromyscus_maniculatus_bairdii
ENSCSEG00000017770	eif3c	100	73.747	ENSPCIG00000025206	-	100	74.754	Phascolarctos_cinereus
ENSCSEG00000017770	eif3c	100	90.226	ENSPFOG00000004476	eif3c	100	89.796	Poecilia_formosa
ENSCSEG00000017770	eif3c	100	83.352	ENSPLAG00000017480	eif3c	100	89.791	Poecilia_latipinna
ENSCSEG00000017770	eif3c	100	90.215	ENSPMEG00000019512	eif3c	100	90.108	Poecilia_mexicana
ENSCSEG00000017770	eif3c	100	83.498	ENSPREG00000023139	eif3c	96	93.125	Poecilia_reticulata
ENSCSEG00000017770	eif3c	100	72.096	ENSPPYG00000007227	-	100	72.489	Pongo_abelii
ENSCSEG00000017770	eif3c	66	82.392	ENSPCAG00000012710	-	100	82.392	Procavia_capensis
ENSCSEG00000017770	eif3c	100	75.218	ENSPCOG00000019289	-	100	75.109	Propithecus_coquereli
ENSCSEG00000017770	eif3c	100	75.109	ENSPVAG00000005804	-	100	75.000	Pteropus_vampyrus
ENSCSEG00000017770	eif3c	66	77.564	ENSPNYG00000016530	eif3c	83	92.727	Pundamilia_nyererei
ENSCSEG00000017770	eif3c	100	85.531	ENSPNAG00000024040	eif3c	100	85.408	Pygocentrus_nattereri
ENSCSEG00000017770	eif3c	100	73.552	ENSRNOG00000018761	Eif3c	100	73.770	Rattus_norvegicus
ENSCSEG00000017770	eif3c	98	74.009	ENSRBIG00000044009	-	98	74.390	Rhinopithecus_bieti
ENSCSEG00000017770	eif3c	100	74.672	ENSRROG00000043626	-	100	74.563	Rhinopithecus_roxellana
ENSCSEG00000017770	eif3c	75	30.466	YMR309C	-	83	30.466	Saccharomyces_cerevisiae
ENSCSEG00000017770	eif3c	100	74.454	ENSSBOG00000032155	-	100	74.345	Saimiri_boliviensis_boliviensis
ENSCSEG00000017770	eif3c	97	74.183	ENSSHAG00000011808	-	99	75.367	Sarcophilus_harrisii
ENSCSEG00000017770	eif3c	100	85.714	ENSSFOG00015021823	eif3c	100	85.161	Scleropages_formosus
ENSCSEG00000017770	eif3c	98	88.938	ENSSMAG00000016638	eif3c	97	91.470	Scophthalmus_maximus
ENSCSEG00000017770	eif3c	100	92.258	ENSSDUG00000023117	eif3c	100	92.473	Seriola_dumerili
ENSCSEG00000017770	eif3c	100	92.473	ENSSLDG00000009706	eif3c	100	92.688	Seriola_lalandi_dorsalis
ENSCSEG00000017770	eif3c	100	75.492	ENSSPUG00000016470	-	100	75.602	Sphenodon_punctatus
ENSCSEG00000017770	eif3c	100	91.407	ENSSPAG00000000426	eif3c	100	92.159	Stegastes_partitus
ENSCSEG00000017770	eif3c	100	74.236	ENSSSCG00000034927	-	100	74.454	Sus_scrofa
ENSCSEG00000017770	eif3c	99	89.525	ENSTRUG00000008951	eif3c	99	89.309	Takifugu_rubripes
ENSCSEG00000017770	eif3c	100	86.222	ENSTNIG00000015210	eif3c	100	86.975	Tetraodon_nigroviridis
ENSCSEG00000017770	eif3c	100	74.891	ENSTTRG00000005880	-	100	74.782	Tursiops_truncatus
ENSCSEG00000017770	eif3c	67	82.843	ENSUAMG00000001127	-	91	90.764	Ursus_americanus
ENSCSEG00000017770	eif3c	100	75.109	ENSUMAG00000010927	-	100	75.000	Ursus_maritimus
ENSCSEG00000017770	eif3c	100	73.908	ENSVVUG00000025970	-	100	73.799	Vulpes_vulpes
ENSCSEG00000017770	eif3c	100	76.226	ENSXETG00000002941	eif3c	100	76.226	Xenopus_tropicalis
ENSCSEG00000017770	eif3c	100	89.733	ENSXMAG00000013796	eif3c	100	89.400	Xiphophorus_maculatus