EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSEG00000017861 (Gene tree)
Gene ID
103384485
Gene Symbol
-
Alias
rab39b|zgc:153068
Full Name
RAB39B%2C member RAS oncogene family
Gene Type
protein_coding
Species
Cynoglossus_semilaevis
Status
putative
Strand
Minus strand
Length
5646 bases
Position
chr1:20863269-20868914
Accession
103384485
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSEP00000027952MMR_HSR1PF01926.233.6e-0611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSET00000028327-3286XM_008318027ENSCSEP00000027952213 (aa)XP_008316249UPI000495F41C
Gene Model
Click here to download ENSCSEG00000017861's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000017861's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSEG00000017861-7737.195ENSCSEG00000017024rab5c7437.195
ENSCSEG00000017861-8137.572ENSCSEG00000019797rab22a8837.572
ENSCSEG00000017861-7637.349ENSCSEG00000005357-7937.349
ENSCSEG00000017861-7338.217ENSCSEG00000012961rab34a6038.217
ENSCSEG00000017861-7736.196ENSCSEG00000011820rras8235.976
ENSCSEG00000017861-8232.609ENSCSEG00000000717rasl11a6833.140
ENSCSEG00000017861-7943.452ENSCSEG00000003768rab157143.452
ENSCSEG00000017861-5432.759ENSCSEG00000015746-8832.558
ENSCSEG00000017861-6933.333ENSCSEG00000003537rhebl17933.333
ENSCSEG00000017861-9835.577ENSCSEG00000004941rab419435.577
ENSCSEG00000017861-7835.329ENSCSEG00000018987si:ch73-116o1.27935.329
ENSCSEG00000017861-8744.086ENSCSEG00000016498rab148644.086
ENSCSEG00000017861-7836.747ENSCSEG00000005737kras8736.145
ENSCSEG00000017861-7734.320ENSCSEG00000015770si:cabz01085950.18234.320
ENSCSEG00000017861-7746.667ENSCSEG00000020977-8046.667
ENSCSEG00000017861-6944.595ENSCSEG00000020348rab33ba6244.595
ENSCSEG00000017861-7246.452ENSCSEG00000006243zgc:1015596646.452
ENSCSEG00000017861-7645.679ENSCSEG00000013400rab35b7945.679
ENSCSEG00000017861-6931.333ENSCSEG00000016611rheb7931.333
ENSCSEG00000017861-7135.526ENSCSEG00000010565rab237935.366
ENSCSEG00000017861-8141.860ENSCSEG00000016803rab18b8741.860
ENSCSEG00000017861-7546.875ENSCSEG00000000205RAB157646.875
ENSCSEG00000017861-7540.252ENSCSEG00000016556rab6bb7540.252
ENSCSEG00000017861-9849.541ENSCSEG00000019183si:dkey-34d22.59849.541
ENSCSEG00000017861-7842.857ENSCSEG00000016933rab126842.857
ENSCSEG00000017861-7637.349ENSCSEG00000002970RAB7A7437.349
ENSCSEG00000017861-10091.549ENSCSEG00000019722RAB39B10091.549
ENSCSEG00000017861-8645.355ENSCSEG00000007121rab11ba7045.355
ENSCSEG00000017861-7739.645ENSCSEG00000014467rab9b7639.645
ENSCSEG00000017861-7840.000ENSCSEG00000010116rab9a7940.000
ENSCSEG00000017861-7932.370ENSCSEG00000014284dnajc276332.370
ENSCSEG00000017861-7846.988ENSCSEG00000007292rab308146.988
ENSCSEG00000017861-10054.128ENSCSEG00000010582rab42a10054.128
ENSCSEG00000017861-8243.678ENSCSEG00000011982rab25b8043.182
ENSCSEG00000017861-7548.466ENSCSEG00000016284rab33a5848.466
ENSCSEG00000017861-8043.275ENSCSEG00000014416zgc:1719277943.275
ENSCSEG00000017861-8847.872ENSCSEG00000017211rab2a8847.872
ENSCSEG00000017861-8345.198ENSCSEG00000017026rab25a8345.198
ENSCSEG00000017861-6240.152ENSCSEG00000018133rab34b5240.152
ENSCSEG00000017861-7632.317ENSCSEG00000005479rabl27032.317
ENSCSEG00000017861-8145.930ENSCSEG00000002358rab138545.930
ENSCSEG00000017861-8246.552ENSCSEG00000007239-7946.552
ENSCSEG00000017861-7838.554ENSCSEG00000007927hrasb8638.554
ENSCSEG00000017861-7540.252ENSCSEG00000003122rab6ba7540.252
ENSCSEG00000017861-7042.208ENSCSEG00000014479-6342.484
ENSCSEG00000017861-8445.000ENSCSEG00000010402-8045.000
ENSCSEG00000017861-9742.105ENSCSEG00000007383rab11a9442.105
ENSCSEG00000017861-8045.029ENSCSEG00000018732rab1ba8445.029
ENSCSEG00000017861-7737.805ENSCSEG00000009987rras28037.805
ENSCSEG00000017861-8140.116ENSCSEG00000011816rab18a8340.116
ENSCSEG00000017861-9742.584ENSCSEG00000011996rab11al9442.584
ENSCSEG00000017861-8246.552ENSCSEG00000012149rab11bb7946.552
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSEG00000017861-10090.141ENSG00000155961RAB39B10090.141Homo_sapiens
ENSCSEG00000017861-10090.610ENSAPOG00000005301RAB39B10090.610Acanthochromis_polyacanthus
ENSCSEG00000017861-10099.531ENSAPOG00000014970-10099.531Acanthochromis_polyacanthus
ENSCSEG00000017861-10090.610ENSAMEG00000009075RAB39B10090.610Ailuropoda_melanoleuca
ENSCSEG00000017861-10091.080ENSACIG00000000154RAB39B10091.080Amphilophus_citrinellus
ENSCSEG00000017861-10099.061ENSACIG00000023837-10099.061Amphilophus_citrinellus
ENSCSEG00000017861-10099.531ENSAOCG00000007928RAB39B10099.531Amphiprion_ocellaris
ENSCSEG00000017861-10090.610ENSAPEG00000017138RAB39B10090.610Amphiprion_percula
ENSCSEG00000017861-10099.531ENSAPEG00000016172-10099.531Amphiprion_percula
ENSCSEG00000017861-10092.019ENSATEG00000009865RAB39B10092.019Anabas_testudineus
ENSCSEG00000017861-10099.531ENSATEG00000013086-10099.531Anabas_testudineus
ENSCSEG00000017861-9989.151ENSAPLG00000014543RAB39B10089.151Anas_platyrhynchos
ENSCSEG00000017861-9990.047ENSANAG00000031228RAB39B10087.793Aotus_nancymaae
ENSCSEG00000017861-10099.531ENSACLG00000027590-10099.531Astatotilapia_calliptera
ENSCSEG00000017861-10091.080ENSACLG00000009468RAB39B10091.080Astatotilapia_calliptera
ENSCSEG00000017861-10099.531ENSACLG00000022893-10099.531Astatotilapia_calliptera
ENSCSEG00000017861-10094.366ENSAMXG00000003717rab39bb10094.366Astyanax_mexicanus
ENSCSEG00000017861-10095.305ENSAMXG00000041657rab39ba10095.305Astyanax_mexicanus
ENSCSEG00000017861-10090.610ENSBTAG00000019779RAB39B10090.610Bos_taurus
ENSCSEG00000017861-10090.141ENSCJAG00000047802RAB39B10090.141Callithrix_jacchus
ENSCSEG00000017861-9990.000ENSCAFG00000019640RAB39B9990.000Canis_familiaris
ENSCSEG00000017861-10090.610ENSCAFG00020008673RAB39B10090.610Canis_lupus_dingo
ENSCSEG00000017861-10090.610ENSCHIG00000000158RAB39B10090.610Capra_hircus
ENSCSEG00000017861-10090.141ENSTSYG00000030186RAB39B10090.141Carlito_syrichta
ENSCSEG00000017861-10090.141ENSCPOG00000039524RAB39B10090.141Cavia_porcellus
ENSCSEG00000017861-10090.141ENSCCAG00000030469RAB39B10090.141Cebus_capucinus
ENSCSEG00000017861-10090.141ENSCATG00000034919RAB39B10090.141Cercocebus_atys
ENSCSEG00000017861-10090.141ENSCLAG00000000113RAB39B10090.141Chinchilla_lanigera
ENSCSEG00000017861-10090.141ENSCSAG00000006507RAB39B10090.141Chlorocebus_sabaeus
ENSCSEG00000017861-10090.141ENSCPBG00000001057RAB39B10090.141Chrysemys_picta_bellii
ENSCSEG00000017861-10090.141ENSCANG00000034492RAB39B10090.141Colobus_angolensis_palliatus
ENSCSEG00000017861-10089.671ENSCGRG00001022502Rab39b10089.671Cricetulus_griseus_chok1gshd
ENSCSEG00000017861-10089.671ENSCGRG00000013798Rab39b10089.671Cricetulus_griseus_crigri
ENSCSEG00000017861-10091.549ENSCVAG00000014915RAB39B10091.549Cyprinodon_variegatus
ENSCSEG00000017861-10099.061ENSCVAG00000015862-10099.061Cyprinodon_variegatus
ENSCSEG00000017861-10094.836ENSDARG00000019312rab39ba10094.836Danio_rerio
ENSCSEG00000017861-10093.427ENSDARG00000036501rab39bb10093.427Danio_rerio
ENSCSEG00000017861-7091.333ENSDNOG00000033622RAB39B6791.333Dasypus_novemcinctus
ENSCSEG00000017861-10089.671ENSDORG00000029496Rab39b10089.671Dipodomys_ordii
ENSCSEG00000017861-10090.141ENSETEG00000009624RAB39B10090.141Echinops_telfairi
ENSCSEG00000017861-10090.610ENSEASG00005016822RAB39B10090.610Equus_asinus_asinus
ENSCSEG00000017861-10090.610ENSECAG00000007380RAB39B10090.610Equus_caballus
ENSCSEG00000017861-10095.305ENSELUG00000005304rab39ba10095.305Esox_lucius
ENSCSEG00000017861-10097.653ENSELUG00000013957-10097.653Esox_lucius
ENSCSEG00000017861-10090.610ENSFCAG00000038920RAB39B10090.610Felis_catus
ENSCSEG00000017861-10090.141ENSFALG00000000201RAB39B10090.141Ficedula_albicollis
ENSCSEG00000017861-10090.141ENSFDAG00000014725RAB39B10090.141Fukomys_damarensis
ENSCSEG00000017861-10091.080ENSFHEG00000020877RAB39B10091.080Fundulus_heteroclitus
ENSCSEG00000017861-10099.531ENSFHEG00000002885-10099.531Fundulus_heteroclitus
ENSCSEG00000017861-10092.019ENSGMOG00000010808RAB39B10092.019Gadus_morhua
ENSCSEG00000017861-10099.065ENSGMOG00000008450-9999.065Gadus_morhua
ENSCSEG00000017861-10089.671ENSGALG00000040784RAB39B9891.724Gallus_gallus
ENSCSEG00000017861-10099.531ENSGAFG00000006932-10099.531Gambusia_affinis
ENSCSEG00000017861-10092.019ENSGAFG00000004604RAB39B10092.019Gambusia_affinis
ENSCSEG00000017861-10089.202ENSGACG00000020437-10089.202Gasterosteus_aculeatus
ENSCSEG00000017861-10098.598ENSGACG00000001950RAB39B9998.598Gasterosteus_aculeatus
ENSCSEG00000017861-10090.141ENSGAGG00000008447RAB39B10090.141Gopherus_agassizii
ENSCSEG00000017861-10090.141ENSGGOG00000005567RAB39B10090.141Gorilla_gorilla
ENSCSEG00000017861-10099.531ENSHBUG00000013570-10099.531Haplochromis_burtoni
ENSCSEG00000017861-10091.080ENSHBUG00000003539RAB39B10091.080Haplochromis_burtoni
ENSCSEG00000017861-10090.141ENSHGLG00000000990RAB39B10090.141Heterocephalus_glaber_female
ENSCSEG00000017861-10090.141ENSHGLG00100000180RAB39B10090.141Heterocephalus_glaber_male
ENSCSEG00000017861-10087.324ENSHCOG00000003981RAB39B10087.324Hippocampus_comes
ENSCSEG00000017861-10095.305ENSHCOG00000019732-10095.305Hippocampus_comes
ENSCSEG00000017861-10090.610ENSIPUG00000020833rab39b10090.610Ictalurus_punctatus
ENSCSEG00000017861-10094.836ENSIPUG00000024203rab39ba10094.836Ictalurus_punctatus
ENSCSEG00000017861-10090.141ENSSTOG00000011237RAB39B10090.141Ictidomys_tridecemlineatus
ENSCSEG00000017861-10090.141ENSJJAG00000016977Rab39b10090.141Jaculus_jaculus
ENSCSEG00000017861-10091.549ENSKMAG00000008625RAB39B10091.549Kryptolebias_marmoratus
ENSCSEG00000017861-10090.610ENSLBEG00000001313RAB39B10090.610Labrus_bergylta
ENSCSEG00000017861-10099.061ENSLBEG00000022630-10099.061Labrus_bergylta
ENSCSEG00000017861-10077.465ENSLACG00000002332-10077.465Latimeria_chalumnae
ENSCSEG00000017861-10091.549ENSLACG00000016074RAB39B10091.549Latimeria_chalumnae
ENSCSEG00000017861-10094.836ENSLOCG00000014927rab39bb9894.836Lepisosteus_oculatus
ENSCSEG00000017861-10076.526ENSLOCG00000006748-10076.526Lepisosteus_oculatus
ENSCSEG00000017861-10090.141ENSLAFG00000030959RAB39B10090.141Loxodonta_africana
ENSCSEG00000017861-10090.141ENSMFAG00000036188RAB39B10090.141Macaca_fascicularis
ENSCSEG00000017861-10090.141ENSMMUG00000015096RAB39B10090.141Macaca_mulatta
ENSCSEG00000017861-10090.141ENSMNEG00000030607RAB39B10090.141Macaca_nemestrina
ENSCSEG00000017861-10090.141ENSMLEG00000029019RAB39B10090.141Mandrillus_leucophaeus
ENSCSEG00000017861-10090.610ENSMAMG00000021329RAB39B10090.610Mastacembelus_armatus
ENSCSEG00000017861-10099.531ENSMAMG00000011131-10099.531Mastacembelus_armatus
ENSCSEG00000017861-10091.080ENSMZEG00005002185RAB39B10091.080Maylandia_zebra
ENSCSEG00000017861-10099.531ENSMZEG00005021222-10099.531Maylandia_zebra
ENSCSEG00000017861-10089.671ENSMAUG00000011701Rab39b10089.671Mesocricetus_auratus
ENSCSEG00000017861-10090.141ENSMICG00000044410RAB39B10090.141Microcebus_murinus
ENSCSEG00000017861-10090.141ENSMOCG00000006994Rab39b10090.141Microtus_ochrogaster
ENSCSEG00000017861-10091.080ENSMMOG00000014549-10091.080Mola_mola
ENSCSEG00000017861-10085.116ENSMMOG00000014491RAB39B10085.116Mola_mola
ENSCSEG00000017861-6890.278ENSMODG00000016498-9090.278Monodelphis_domestica
ENSCSEG00000017861-10090.141ENSMALG00000018973RAB39B10090.141Monopterus_albus
ENSCSEG00000017861-10099.531ENSMALG00000012723RAB39B10099.531Monopterus_albus
ENSCSEG00000017861-10090.141ENSMUSG00000031202Rab39b10090.141Mus_musculus
ENSCSEG00000017861-10090.141MGP_SPRETEiJ_G0034360Rab39b10090.141Mus_spretus
ENSCSEG00000017861-10090.610ENSMPUG00000016129RAB39B10090.610Mustela_putorius_furo
ENSCSEG00000017861-10089.671ENSMLUG00000007660RAB39B10089.671Myotis_lucifugus
ENSCSEG00000017861-10090.141ENSNGAG00000000596Rab39b10090.141Nannospalax_galili
ENSCSEG00000017861-10091.549ENSNBRG00000005082RAB39B10091.549Neolamprologus_brichardi
ENSCSEG00000017861-10099.531ENSNBRG00000018106-10099.531Neolamprologus_brichardi
ENSCSEG00000017861-10090.141ENSNLEG00000014505RAB39B10090.141Nomascus_leucogenys
ENSCSEG00000017861-10090.141ENSODEG00000000520RAB39B10090.141Octodon_degus
ENSCSEG00000017861-10099.531ENSONIG00000006997-10099.531Oreochromis_niloticus
ENSCSEG00000017861-10091.549ENSONIG00000008545RAB39B10091.549Oreochromis_niloticus
ENSCSEG00000017861-10090.141ENSOCUG00000004254RAB39B10090.141Oryctolagus_cuniculus
ENSCSEG00000017861-10096.714ENSORLG00000008345-10096.714Oryzias_latipes
ENSCSEG00000017861-10092.019ENSORLG00000001850RAB39B10092.019Oryzias_latipes
ENSCSEG00000017861-10092.019ENSORLG00020019269RAB39B10092.019Oryzias_latipes_hni
ENSCSEG00000017861-10091.549ENSORLG00015003202RAB39B10091.549Oryzias_latipes_hsok
ENSCSEG00000017861-10097.183ENSORLG00015022289-10097.183Oryzias_latipes_hsok
ENSCSEG00000017861-10099.531ENSOMEG00000017881-10099.531Oryzias_melastigma
ENSCSEG00000017861-10091.549ENSOMEG00000006333RAB39B10091.549Oryzias_melastigma
ENSCSEG00000017861-10090.141ENSOGAG00000025424RAB39B10090.141Otolemur_garnettii
ENSCSEG00000017861-10090.610ENSOARG00000003682RAB39B8390.610Ovis_aries
ENSCSEG00000017861-10090.141ENSPPAG00000041186RAB39B10090.141Pan_paniscus
ENSCSEG00000017861-10089.671ENSPPRG00000017193RAB39B10089.671Panthera_pardus
ENSCSEG00000017861-9590.099ENSPTIG00000006927RAB39B10090.099Panthera_tigris_altaica
ENSCSEG00000017861-10090.141ENSPTRG00000042083RAB39B10090.141Pan_troglodytes
ENSCSEG00000017861-10090.141ENSPTRG00000048400-10090.141Pan_troglodytes
ENSCSEG00000017861-10090.141ENSPANG00000008960RAB39B10090.141Papio_anubis
ENSCSEG00000017861-10077.934ENSPKIG00000025667-10077.934Paramormyrops_kingsleyae
ENSCSEG00000017861-10095.775ENSPKIG00000020795rab39bb10095.775Paramormyrops_kingsleyae
ENSCSEG00000017861-10089.671ENSPSIG00000009419RAB39B10089.671Pelodiscus_sinensis
ENSCSEG00000017861-10098.592ENSPMGG00000023081rab39bb10098.592Periophthalmus_magnuspinnatus
ENSCSEG00000017861-10089.202ENSPCIG00000029333RAB39B10089.202Phascolarctos_cinereus
ENSCSEG00000017861-10099.531ENSPFOG00000004684-10099.531Poecilia_formosa
ENSCSEG00000017861-10092.019ENSPFOG00000004492RAB39B10092.019Poecilia_formosa
ENSCSEG00000017861-10092.019ENSPLAG00000007237RAB39B10092.019Poecilia_latipinna
ENSCSEG00000017861-10099.531ENSPLAG00000018322-10099.531Poecilia_latipinna
ENSCSEG00000017861-10092.019ENSPMEG00000004946RAB39B10092.019Poecilia_mexicana
ENSCSEG00000017861-10099.531ENSPMEG00000007976-10099.531Poecilia_mexicana
ENSCSEG00000017861-10099.531ENSPREG00000009597-10099.531Poecilia_reticulata
ENSCSEG00000017861-10092.019ENSPREG00000007129RAB39B10092.019Poecilia_reticulata
ENSCSEG00000017861-10090.141ENSPPYG00000020901RAB39B10090.141Pongo_abelii
ENSCSEG00000017861-10090.141ENSPCOG00000013225RAB39B10090.141Propithecus_coquereli
ENSCSEG00000017861-10090.610ENSPVAG00000016854RAB39B10090.610Pteropus_vampyrus
ENSCSEG00000017861-10091.080ENSPNYG00000015774RAB39B10091.080Pundamilia_nyererei
ENSCSEG00000017861-10099.531ENSPNYG00000019276-10099.531Pundamilia_nyererei
ENSCSEG00000017861-10095.305ENSPNAG00000013897rab39ba10095.305Pygocentrus_nattereri
ENSCSEG00000017861-10093.427ENSPNAG00000013589rab39bb10093.427Pygocentrus_nattereri
ENSCSEG00000017861-10090.141ENSRBIG00000031945RAB39B10090.141Rhinopithecus_bieti
ENSCSEG00000017861-10090.141ENSRROG00000000340RAB39B10090.141Rhinopithecus_roxellana
ENSCSEG00000017861-10090.141ENSSBOG00000025110RAB39B10090.141Saimiri_boliviensis_boliviensis
ENSCSEG00000017861-10075.587ENSSFOG00015009244rab39bb10075.587Scleropages_formosus
ENSCSEG00000017861-10076.526ENSSFOG00015003628-10076.526Scleropages_formosus
ENSCSEG00000017861-10091.080ENSSFOG00015018421rab39b10091.080Scleropages_formosus
ENSCSEG00000017861-10091.549ENSSMAG00000001953rab39bb10091.549Scophthalmus_maximus
ENSCSEG00000017861-10099.061ENSSDUG00000014091-10099.061Seriola_dumerili
ENSCSEG00000017861-10092.488ENSSLDG00000006360RAB39B10092.488Seriola_lalandi_dorsalis
ENSCSEG00000017861-10099.061ENSSLDG00000009068-10099.061Seriola_lalandi_dorsalis
ENSCSEG00000017861-10090.141ENSSPUG00000000552RAB39B10090.141Sphenodon_punctatus
ENSCSEG00000017861-10099.531ENSSPAG00000010919-10099.531Stegastes_partitus
ENSCSEG00000017861-10091.549ENSSPAG00000010771RAB39B10091.549Stegastes_partitus
ENSCSEG00000017861-10090.610ENSSSCG00000024233RAB39B10090.610Sus_scrofa
ENSCSEG00000017861-10098.592ENSTRUG00000025018rab39bb10098.592Takifugu_rubripes
ENSCSEG00000017861-10098.605ENSTNIG00000003679-10098.605Tetraodon_nigroviridis
ENSCSEG00000017861-10090.141ENSTBEG00000008074RAB39B10090.141Tupaia_belangeri
ENSCSEG00000017861-10090.610ENSUAMG00000023026RAB39B10090.610Ursus_americanus
ENSCSEG00000017861-10090.610ENSUMAG00000017386RAB39B10090.610Ursus_maritimus
ENSCSEG00000017861-10090.610ENSVVUG00000012142RAB39B10090.610Vulpes_vulpes
ENSCSEG00000017861-10091.080ENSXETG00000032443RAB39B10091.080Xenopus_tropicalis
ENSCSEG00000017861-10099.531ENSXCOG00000006807rab39bb10099.531Xiphophorus_couchianus
ENSCSEG00000017861-10099.531ENSXMAG00000001480-10099.531Xiphophorus_maculatus
ENSCSEG00000017861-10092.019ENSXMAG00000000325RAB39B10092.019Xiphophorus_maculatus

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