EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000017878 (Gene tree)
Gene ID: 103395419
Gene Symbol: srrt
Alias: CHUNP6881|ars2|zgc:92060
Full Name: serrate%2C RNA effector molecule
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 7313 bases
Position: chr19:13769135-13776447
Accession: 103395419
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000028033	ARS2	PF04959.13	2e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000028408	-	2589	XM_017041487	ENSCSEP00000028033	862 (aa)	XP_016896976	-

Gene Model

Click here to download ENSCSEG00000017878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000017878's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000017878	srrt	50	60.168	ENSCSEG00000005233	-	54	61.822

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000017878	srrt	50	68.696	ENSG00000087087	SRRT	98	85.484	Homo_sapiens
ENSCSEG00000017878	srrt	95	78.799	ENSAPOG00000002304	srrt	98	78.096	Acanthochromis_polyacanthus
ENSCSEG00000017878	srrt	96	60.550	ENSAMEG00000014506	SRRT	96	58.409	Ailuropoda_melanoleuca
ENSCSEG00000017878	srrt	95	68.986	ENSACIG00000015795	srrt	98	80.828	Amphilophus_citrinellus
ENSCSEG00000017878	srrt	93	51.953	ENSAOCG00000009189	-	96	54.171	Amphiprion_ocellaris
ENSCSEG00000017878	srrt	95	79.457	ENSAOCG00000009693	srrt	98	78.161	Amphiprion_ocellaris
ENSCSEG00000017878	srrt	95	79.221	ENSAPEG00000003646	srrt	97	80.828	Amphiprion_percula
ENSCSEG00000017878	srrt	93	51.953	ENSAPEG00000020016	-	96	54.171	Amphiprion_percula
ENSCSEG00000017878	srrt	50	58.562	ENSATEG00000003652	-	85	60.645	Anabas_testudineus
ENSCSEG00000017878	srrt	95	76.950	ENSATEG00000014425	srrt	98	76.498	Anabas_testudineus
ENSCSEG00000017878	srrt	95	60.936	ENSACAG00000001014	SRRT	98	61.758	Anolis_carolinensis
ENSCSEG00000017878	srrt	50	67.666	ENSANAG00000031718	SRRT	53	66.809	Aotus_nancymaae
ENSCSEG00000017878	srrt	50	59.785	ENSACLG00000009423	-	96	52.982	Astatotilapia_calliptera
ENSCSEG00000017878	srrt	95	77.568	ENSACLG00000013156	srrt	94	77.189	Astatotilapia_calliptera
ENSCSEG00000017878	srrt	50	67.238	ENSBTAG00000001134	SRRT	53	66.381	Bos_taurus
ENSCSEG00000017878	srrt	62	41.591	WBGene00017085	E01A2.2	85	40.466	Caenorhabditis_elegans
ENSCSEG00000017878	srrt	50	67.452	ENSCJAG00000014917	SRRT	53	66.595	Callithrix_jacchus
ENSCSEG00000017878	srrt	96	61.136	ENSCAFG00000023538	SRRT	53	66.809	Canis_familiaris
ENSCSEG00000017878	srrt	98	60.491	ENSCAFG00020013358	SRRT	52	68.502	Canis_lupus_dingo
ENSCSEG00000017878	srrt	83	66.882	ENSCHIG00000010495	SRRT	88	66.022	Capra_hircus
ENSCSEG00000017878	srrt	96	57.583	ENSTSYG00000036426	SRRT	99	58.324	Carlito_syrichta
ENSCSEG00000017878	srrt	50	68.122	ENSCAPG00000013586	SRRT	89	66.381	Cavia_aperea
ENSCSEG00000017878	srrt	50	67.308	ENSCPOG00000001739	SRRT	53	66.453	Cavia_porcellus
ENSCSEG00000017878	srrt	50	67.666	ENSCCAG00000015877	SRRT	53	66.809	Cebus_capucinus
ENSCSEG00000017878	srrt	50	67.666	ENSCATG00000036306	SRRT	53	66.809	Cercocebus_atys
ENSCSEG00000017878	srrt	96	59.681	ENSCLAG00000007568	SRRT	89	68.132	Chinchilla_lanigera
ENSCSEG00000017878	srrt	50	67.666	ENSCSAG00000017996	SRRT	53	66.809	Chlorocebus_sabaeus
ENSCSEG00000017878	srrt	50	72.593	ENSCHOG00000007815	SRRT	67	63.666	Choloepus_hoffmanni
ENSCSEG00000017878	srrt	74	65.428	ENSCPBG00000011553	SRRT	86	66.441	Chrysemys_picta_bellii
ENSCSEG00000017878	srrt	100	39.339	ENSCING00000003506	-	54	49.254	Ciona_intestinalis
ENSCSEG00000017878	srrt	100	40.000	ENSCSAVG00000008394	-	82	55.874	Ciona_savignyi
ENSCSEG00000017878	srrt	50	67.527	ENSCANG00000034556	SRRT	53	66.667	Colobus_angolensis_palliatus
ENSCSEG00000017878	srrt	96	58.076	ENSCGRG00001001594	Srrt	53	67.238	Cricetulus_griseus_chok1gshd
ENSCSEG00000017878	srrt	68	77.070	ENSCGRG00000007292	Srrt	89	67.826	Cricetulus_griseus_crigri
ENSCSEG00000017878	srrt	95	77.804	ENSCVAG00000019848	srrt	95	79.869	Cyprinodon_variegatus
ENSCSEG00000017878	srrt	95	68.910	ENSDARG00000017762	srrt	98	69.413	Danio_rerio
ENSCSEG00000017878	srrt	50	67.666	ENSDNOG00000003851	SRRT	53	66.809	Dasypus_novemcinctus
ENSCSEG00000017878	srrt	96	58.696	ENSDORG00000005584	Srrt	89	67.171	Dipodomys_ordii
ENSCSEG00000017878	srrt	87	48.228	FBgn0033062	Ars2	68	49.569	Drosophila_melanogaster
ENSCSEG00000017878	srrt	73	69.500	ENSETEG00000016175	SRRT	71	70.440	Echinops_telfairi
ENSCSEG00000017878	srrt	77	46.408	ENSEBUG00000008517	-	77	58.225	Eptatretus_burgeri
ENSCSEG00000017878	srrt	96	61.206	ENSEASG00005016956	SRRT	96	59.657	Equus_asinus_asinus
ENSCSEG00000017878	srrt	96	61.206	ENSECAG00000012292	SRRT	96	59.657	Equus_caballus
ENSCSEG00000017878	srrt	80	72.000	ENSEEUG00000009117	SRRT	66	73.000	Erinaceus_europaeus
ENSCSEG00000017878	srrt	93	54.959	ENSELUG00000021216	-	96	56.036	Esox_lucius
ENSCSEG00000017878	srrt	95	66.818	ENSELUG00000006651	srrt	50	74.026	Esox_lucius
ENSCSEG00000017878	srrt	96	60.775	ENSFCAG00000006855	SRRT	53	66.809	Felis_catus
ENSCSEG00000017878	srrt	50	67.277	ENSFDAG00000021347	SRRT	88	67.735	Fukomys_damarensis
ENSCSEG00000017878	srrt	79	81.323	ENSFHEG00000002756	srrt	97	81.295	Fundulus_heteroclitus
ENSCSEG00000017878	srrt	50	57.143	ENSFHEG00000004105	-	93	56.710	Fundulus_heteroclitus
ENSCSEG00000017878	srrt	61	67.176	ENSGMOG00000018694	-	78	61.024	Gadus_morhua
ENSCSEG00000017878	srrt	95	68.009	ENSGMOG00000018619	srrt	98	68.519	Gadus_morhua
ENSCSEG00000017878	srrt	95	73.790	ENSGAFG00000005423	srrt	98	74.799	Gambusia_affinis
ENSCSEG00000017878	srrt	50	57.826	ENSGAFG00000020383	-	96	51.852	Gambusia_affinis
ENSCSEG00000017878	srrt	93	51.243	ENSGACG00000001100	-	96	52.601	Gasterosteus_aculeatus
ENSCSEG00000017878	srrt	95	77.166	ENSGACG00000020387	srrt	98	75.799	Gasterosteus_aculeatus
ENSCSEG00000017878	srrt	50	67.666	ENSGGOG00000001508	SRRT	57	68.966	Gorilla_gorilla
ENSCSEG00000017878	srrt	95	78.867	ENSHBUG00000002942	srrt	94	77.189	Haplochromis_burtoni
ENSCSEG00000017878	srrt	96	59.188	ENSHGLG00000008344	Srrt	89	67.982	Heterocephalus_glaber_female
ENSCSEG00000017878	srrt	50	69.011	ENSHGLG00100018857	Srrt	89	68.132	Heterocephalus_glaber_male
ENSCSEG00000017878	srrt	93	50.299	ENSHCOG00000008904	-	92	60.044	Hippocampus_comes
ENSCSEG00000017878	srrt	98	75.806	ENSHCOG00000005403	srrt	98	73.387	Hippocampus_comes
ENSCSEG00000017878	srrt	93	66.986	ENSIPUG00000021150	srrt	98	68.295	Ictalurus_punctatus
ENSCSEG00000017878	srrt	50	67.527	ENSSTOG00000013776	SRRT	53	66.667	Ictidomys_tridecemlineatus
ENSCSEG00000017878	srrt	96	61.072	ENSJJAG00000010446	Srrt	89	67.763	Jaculus_jaculus
ENSCSEG00000017878	srrt	50	59.205	ENSKMAG00000008468	-	96	52.661	Kryptolebias_marmoratus
ENSCSEG00000017878	srrt	95	74.087	ENSKMAG00000013599	srrt	98	74.570	Kryptolebias_marmoratus
ENSCSEG00000017878	srrt	98	71.977	ENSLBEG00000016308	srrt	98	71.914	Labrus_bergylta
ENSCSEG00000017878	srrt	90	57.333	ENSLOCG00000013658	srrt	100	56.127	Lepisosteus_oculatus
ENSCSEG00000017878	srrt	96	60.964	ENSLAFG00000007725	SRRT	96	60.850	Loxodonta_africana
ENSCSEG00000017878	srrt	50	67.527	ENSMFAG00000033745	SRRT	56	65.684	Macaca_fascicularis
ENSCSEG00000017878	srrt	50	67.666	ENSMMUG00000021255	SRRT	53	66.809	Macaca_mulatta
ENSCSEG00000017878	srrt	50	67.666	ENSMNEG00000041864	SRRT	53	66.809	Macaca_nemestrina
ENSCSEG00000017878	srrt	50	67.527	ENSMLEG00000029479	SRRT	55	65.684	Mandrillus_leucophaeus
ENSCSEG00000017878	srrt	95	78.014	ENSMAMG00000014311	srrt	98	78.316	Mastacembelus_armatus
ENSCSEG00000017878	srrt	93	52.732	ENSMAMG00000010681	-	96	54.535	Mastacembelus_armatus
ENSCSEG00000017878	srrt	95	78.985	ENSMZEG00005016135	srrt	94	78.802	Maylandia_zebra
ENSCSEG00000017878	srrt	50	59.785	ENSMZEG00005028002	-	96	52.982	Maylandia_zebra
ENSCSEG00000017878	srrt	50	67.452	ENSMAUG00000011386	Srrt	89	67.171	Mesocricetus_auratus
ENSCSEG00000017878	srrt	50	67.666	ENSMICG00000009471	SRRT	55	66.316	Microcebus_murinus
ENSCSEG00000017878	srrt	96	59.453	ENSMOCG00000001971	Srrt	96	61.309	Microtus_ochrogaster
ENSCSEG00000017878	srrt	85	51.813	ENSMMOG00000011137	-	99	48.166	Mola_mola
ENSCSEG00000017878	srrt	50	64.331	ENSMODG00000004862	SRRT	89	64.331	Monodelphis_domestica
ENSCSEG00000017878	srrt	87	73.684	ENSMALG00000018604	srrt	99	70.833	Monopterus_albus
ENSCSEG00000017878	srrt	57	50.101	ENSMALG00000005567	-	84	54.023	Monopterus_albus
ENSCSEG00000017878	srrt	96	62.659	MGP_CAROLIEiJ_G0027870	Srrt	99	65.926	Mus_caroli
ENSCSEG00000017878	srrt	96	62.659	ENSMUSG00000037364	Srrt	99	65.926	Mus_musculus
ENSCSEG00000017878	srrt	96	62.137	MGP_PahariEiJ_G0024456	Srrt	99	65.926	Mus_pahari
ENSCSEG00000017878	srrt	96	62.659	MGP_SPRETEiJ_G0028875	Srrt	99	65.926	Mus_spretus
ENSCSEG00000017878	srrt	96	61.345	ENSMPUG00000015839	SRRT	53	66.809	Mustela_putorius_furo
ENSCSEG00000017878	srrt	50	67.452	ENSMLUG00000009975	SRRT	96	60.253	Myotis_lucifugus
ENSCSEG00000017878	srrt	96	62.097	ENSNGAG00000023715	Srrt	64	66.809	Nannospalax_galili
ENSCSEG00000017878	srrt	50	81.938	ENSNBRG00000019100	srrt	98	74.625	Neolamprologus_brichardi
ENSCSEG00000017878	srrt	75	72.807	ENSNLEG00000011987	SRRT	92	60.526	Nomascus_leucogenys
ENSCSEG00000017878	srrt	96	52.619	ENSMEUG00000011941	SRRT	52	57.391	Notamacropus_eugenii
ENSCSEG00000017878	srrt	62	73.529	ENSOPRG00000002502	-	67	73.529	Ochotona_princeps
ENSCSEG00000017878	srrt	50	68.791	ENSODEG00000016856	SRRT	96	60.936	Octodon_degus
ENSCSEG00000017878	srrt	93	51.680	ENSONIG00000016080	-	95	52.680	Oreochromis_niloticus
ENSCSEG00000017878	srrt	95	78.749	ENSONIG00000004242	srrt	98	75.478	Oreochromis_niloticus
ENSCSEG00000017878	srrt	98	75.230	ENSORLG00000008120	srrt	98	72.811	Oryzias_latipes
ENSCSEG00000017878	srrt	98	75.691	ENSORLG00020003058	srrt	98	72.811	Oryzias_latipes_hni
ENSCSEG00000017878	srrt	98	75.576	ENSORLG00015008062	srrt	98	72.696	Oryzias_latipes_hsok
ENSCSEG00000017878	srrt	98	75.806	ENSOMEG00000003155	srrt	98	80.568	Oryzias_melastigma
ENSCSEG00000017878	srrt	93	53.301	ENSOMEG00000006963	-	96	54.312	Oryzias_melastigma
ENSCSEG00000017878	srrt	50	67.666	ENSOGAG00000017242	SRRT	53	67.452	Otolemur_garnettii
ENSCSEG00000017878	srrt	50	66.882	ENSOARG00000015645	SRRT	53	66.022	Ovis_aries
ENSCSEG00000017878	srrt	50	67.527	ENSPPAG00000041090	SRRT	53	66.667	Pan_paniscus
ENSCSEG00000017878	srrt	96	60.686	ENSPPRG00000009557	SRRT	53	66.667	Panthera_pardus
ENSCSEG00000017878	srrt	96	60.889	ENSPTIG00000014355	SRRT	96	60.115	Panthera_tigris_altaica
ENSCSEG00000017878	srrt	50	67.527	ENSPTRG00000019511	SRRT	53	66.667	Pan_troglodytes
ENSCSEG00000017878	srrt	50	66.526	ENSPANG00000020763	SRRT	54	65.684	Papio_anubis
ENSCSEG00000017878	srrt	94	65.836	ENSPKIG00000022212	-	98	66.475	Paramormyrops_kingsleyae
ENSCSEG00000017878	srrt	98	66.181	ENSPKIG00000005434	srrt	98	68.575	Paramormyrops_kingsleyae
ENSCSEG00000017878	srrt	50	67.615	ENSPSIG00000016311	SRRT	98	60.161	Pelodiscus_sinensis
ENSCSEG00000017878	srrt	50	69.623	ENSPEMG00000010834	Srrt	96	61.789	Peromyscus_maniculatus_bairdii
ENSCSEG00000017878	srrt	96	49.655	ENSPMAG00000009614	-	55	55.274	Petromyzon_marinus
ENSCSEG00000017878	srrt	96	60.875	ENSPCIG00000000816	SRRT	96	60.208	Phascolarctos_cinereus
ENSCSEG00000017878	srrt	95	77.503	ENSPFOG00000005704	srrt	98	77.356	Poecilia_formosa
ENSCSEG00000017878	srrt	50	58.134	ENSPFOG00000016554	-	96	51.211	Poecilia_formosa
ENSCSEG00000017878	srrt	50	57.792	ENSPLAG00000004526	-	96	51.273	Poecilia_latipinna
ENSCSEG00000017878	srrt	95	76.079	ENSPLAG00000021992	srrt	98	75.854	Poecilia_latipinna
ENSCSEG00000017878	srrt	95	75.854	ENSPMEG00000001182	srrt	98	75.977	Poecilia_mexicana
ENSCSEG00000017878	srrt	95	77.150	ENSPREG00000022308	srrt	98	75.977	Poecilia_reticulata
ENSCSEG00000017878	srrt	50	66.385	ENSPCAG00000001621	SRRT	53	65.539	Procavia_capensis
ENSCSEG00000017878	srrt	50	67.666	ENSPCOG00000025751	SRRT	53	67.452	Propithecus_coquereli
ENSCSEG00000017878	srrt	61	62.876	ENSPVAG00000000834	SRRT	91	62.017	Pteropus_vampyrus
ENSCSEG00000017878	srrt	95	78.985	ENSPNYG00000018710	srrt	98	77.304	Pundamilia_nyererei
ENSCSEG00000017878	srrt	70	81.595	ENSPNAG00000010629	srrt	97	58.020	Pygocentrus_nattereri
ENSCSEG00000017878	srrt	50	62.363	ENSRNOG00000048277	AABR07035787.1	92	61.488	Rattus_norvegicus
ENSCSEG00000017878	srrt	50	67.666	ENSRBIG00000035718	SRRT	62	68.966	Rhinopithecus_bieti
ENSCSEG00000017878	srrt	50	67.666	ENSRROG00000030622	SRRT	62	68.966	Rhinopithecus_roxellana
ENSCSEG00000017878	srrt	50	67.666	ENSSBOG00000033570	SRRT	53	66.809	Saimiri_boliviensis_boliviensis
ENSCSEG00000017878	srrt	71	56.317	ENSSHAG00000007349	-	100	55.896	Sarcophilus_harrisii
ENSCSEG00000017878	srrt	94	68.602	ENSSFOG00015017293	srrt	98	69.841	Scleropages_formosus
ENSCSEG00000017878	srrt	95	79.905	ENSSMAG00000015342	srrt	98	81.223	Scophthalmus_maximus
ENSCSEG00000017878	srrt	95	78.723	ENSSDUG00000012049	srrt	98	74.943	Seriola_dumerili
ENSCSEG00000017878	srrt	50	56.209	ENSSDUG00000002051	-	93	55.507	Seriola_dumerili
ENSCSEG00000017878	srrt	83	83.214	ENSSLDG00000017477	srrt	89	83.893	Seriola_lalandi_dorsalis
ENSCSEG00000017878	srrt	95	78.169	ENSSPAG00000005665	srrt	96	78.007	Stegastes_partitus
ENSCSEG00000017878	srrt	50	54.565	ENSSPAG00000018943	-	93	55.098	Stegastes_partitus
ENSCSEG00000017878	srrt	89	50.000	ENSTRUG00000000023	-	50	57.907	Takifugu_rubripes
ENSCSEG00000017878	srrt	98	73.288	ENSTRUG00000016075	srrt	98	71.804	Takifugu_rubripes
ENSCSEG00000017878	srrt	93	51.079	ENSTNIG00000003111	-	53	61.388	Tetraodon_nigroviridis
ENSCSEG00000017878	srrt	73	66.269	ENSTNIG00000011779	srrt	99	66.866	Tetraodon_nigroviridis
ENSCSEG00000017878	srrt	59	72.340	ENSTBEG00000005212	SRRT	58	72.340	Tupaia_belangeri
ENSCSEG00000017878	srrt	50	67.666	ENSTTRG00000011104	SRRT	96	59.908	Tursiops_truncatus
ENSCSEG00000017878	srrt	95	60.855	ENSUAMG00000027997	SRRT	55	66.809	Ursus_americanus
ENSCSEG00000017878	srrt	96	60.990	ENSUMAG00000011295	SRRT	53	66.809	Ursus_maritimus
ENSCSEG00000017878	srrt	96	61.136	ENSVVUG00000023572	SRRT	53	66.809	Vulpes_vulpes
ENSCSEG00000017878	srrt	71	78.571	ENSXETG00000025124	srrt	74	78.571	Xenopus_tropicalis
ENSCSEG00000017878	srrt	51	54.157	ENSXCOG00000013105	-	91	55.760	Xiphophorus_couchianus
ENSCSEG00000017878	srrt	98	77.560	ENSXMAG00000007627	srrt	98	78.834	Xiphophorus_maculatus
ENSCSEG00000017878	srrt	50	57.734	ENSXMAG00000002090	-	96	51.732	Xiphophorus_maculatus