EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000017903 (Gene tree)
Gene ID: 103398305
Gene Symbol: smarcad1a
Alias: smarcad1|wu:fi25c01|zgc:113183
Full Name: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 16509 bases
Position: chrZ:20725531-20742039
Accession: 103398305
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000028012	ResIII	PF04851.15	3e-07	1	1
ENSCSEP00000028025	ResIII	PF04851.15	3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000028402	-	4071	-	ENSCSEP00000028025	1059 (aa)	-	-
ENSCSET00000028387	-	3577	XM_008336883	ENSCSEP00000028012	1059 (aa)	XP_008335105	-

Gene Model

Click here to download ENSCSEG00000017903's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000017903's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000017903	smarcad1a	100	88.701	ENSCSEG00000014419	-	100	88.418

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000017903	smarcad1a	100	46.702	ENSG00000163104	SMARCAD1	100	65.772	Homo_sapiens
ENSCSEG00000017903	smarcad1a	100	72.192	ENSAPOG00000011446	smarcad1a	100	71.915	Acanthochromis_polyacanthus
ENSCSEG00000017903	smarcad1a	98	60.000	ENSAMEG00000005844	SMARCAD1	100	62.245	Ailuropoda_melanoleuca
ENSCSEG00000017903	smarcad1a	66	83.658	ENSACIG00000018326	smarcad1a	91	96.000	Amphilophus_citrinellus
ENSCSEG00000017903	smarcad1a	100	71.982	ENSAOCG00000019762	smarcad1a	100	72.217	Amphiprion_ocellaris
ENSCSEG00000017903	smarcad1a	100	72.585	ENSAPEG00000003889	smarcad1a	100	72.217	Amphiprion_percula
ENSCSEG00000017903	smarcad1a	95	71.899	ENSATEG00000015608	smarcad1a	99	72.434	Anabas_testudineus
ENSCSEG00000017903	smarcad1a	83	65.839	ENSAPLG00000004630	SMARCAD1	98	61.582	Anas_platyrhynchos
ENSCSEG00000017903	smarcad1a	75	65.238	ENSACAG00000013554	SMARCAD1	94	65.062	Anolis_carolinensis
ENSCSEG00000017903	smarcad1a	100	46.614	ENSANAG00000020488	SMARCAD1	100	61.919	Aotus_nancymaae
ENSCSEG00000017903	smarcad1a	100	70.534	ENSACLG00000017063	smarcad1a	100	71.283	Astatotilapia_calliptera
ENSCSEG00000017903	smarcad1a	75	64.953	ENSAMXG00000019130	smarcad1b	81	68.650	Astyanax_mexicanus
ENSCSEG00000017903	smarcad1a	66	67.989	ENSAMXG00000015470	smarcad1a	99	67.989	Astyanax_mexicanus
ENSCSEG00000017903	smarcad1a	100	46.526	ENSBTAG00000017061	SMARCAD1	100	60.426	Bos_taurus
ENSCSEG00000017903	smarcad1a	100	46.344	ENSCJAG00000006778	SMARCAD1	100	62.391	Callithrix_jacchus
ENSCSEG00000017903	smarcad1a	98	60.000	ENSCAFG00000010026	SMARCAD1	100	62.245	Canis_familiaris
ENSCSEG00000017903	smarcad1a	88	60.000	ENSCAFG00020003994	SMARCAD1	98	60.882	Canis_lupus_dingo
ENSCSEG00000017903	smarcad1a	100	46.608	ENSCHIG00000012905	SMARCAD1	100	62.099	Capra_hircus
ENSCSEG00000017903	smarcad1a	100	46.438	ENSTSYG00000002706	SMARCAD1	100	46.092	Carlito_syrichta
ENSCSEG00000017903	smarcad1a	92	54.318	ENSCAPG00000016744	SMARCAD1	83	55.360	Cavia_aperea
ENSCSEG00000017903	smarcad1a	98	59.889	ENSCPOG00000011398	SMARCAD1	100	62.245	Cavia_porcellus
ENSCSEG00000017903	smarcad1a	100	46.784	ENSCCAG00000022264	SMARCAD1	100	65.940	Cebus_capucinus
ENSCSEG00000017903	smarcad1a	100	46.872	ENSCATG00000035663	SMARCAD1	100	63.608	Cercocebus_atys
ENSCSEG00000017903	smarcad1a	88	51.214	ENSCSAG00000004186	SMARCAD1	100	62.536	Chlorocebus_sabaeus
ENSCSEG00000017903	smarcad1a	97	60.132	ENSCPBG00000013203	SMARCAD1	99	62.824	Chrysemys_picta_bellii
ENSCSEG00000017903	smarcad1a	60	50.619	ENSCING00000001688	-	97	50.464	Ciona_intestinalis
ENSCSEG00000017903	smarcad1a	100	46.872	ENSCANG00000003556	SMARCAD1	100	65.772	Colobus_angolensis_palliatus
ENSCSEG00000017903	smarcad1a	100	46.971	ENSCGRG00001015056	Smarcad1	65	62.946	Cricetulus_griseus_chok1gshd
ENSCSEG00000017903	smarcad1a	100	46.971	ENSCGRG00000014087	Smarcad1	65	62.946	Cricetulus_griseus_crigri
ENSCSEG00000017903	smarcad1a	69	72.043	ENSDARG00000073721	smarcad1b	79	69.010	Danio_rerio
ENSCSEG00000017903	smarcad1a	100	55.932	ENSDARG00000014041	smarcad1a	100	56.321	Danio_rerio
ENSCSEG00000017903	smarcad1a	100	46.578	ENSDNOG00000000806	-	100	60.882	Dasypus_novemcinctus
ENSCSEG00000017903	smarcad1a	100	46.797	ENSDORG00000012331	Smarcad1	100	60.567	Dipodomys_ordii
ENSCSEG00000017903	smarcad1a	61	46.260	FBgn0032157	Etl1	78	45.482	Drosophila_melanogaster
ENSCSEG00000017903	smarcad1a	62	46.269	ENSEBUG00000003969	smarcad1a	95	47.267	Eptatretus_burgeri
ENSCSEG00000017903	smarcad1a	100	46.655	ENSEASG00005012382	SMARCAD1	100	62.245	Equus_asinus_asinus
ENSCSEG00000017903	smarcad1a	100	46.655	ENSECAG00000011562	SMARCAD1	100	62.245	Equus_caballus
ENSCSEG00000017903	smarcad1a	72	70.076	ENSELUG00000019154	smarcad1b	73	70.216	Esox_lucius
ENSCSEG00000017903	smarcad1a	100	62.361	ENSELUG00000018535	smarcad1a	100	61.803	Esox_lucius
ENSCSEG00000017903	smarcad1a	100	47.405	ENSFCAG00000003958	SMARCAD1	100	65.772	Felis_catus
ENSCSEG00000017903	smarcad1a	100	47.489	ENSFALG00000006089	SMARCAD1	98	62.536	Ficedula_albicollis
ENSCSEG00000017903	smarcad1a	100	46.761	ENSFDAG00000017027	SMARCAD1	100	62.536	Fukomys_damarensis
ENSCSEG00000017903	smarcad1a	100	64.785	ENSFHEG00000012778	smarcad1a	100	65.409	Fundulus_heteroclitus
ENSCSEG00000017903	smarcad1a	82	77.778	ENSGMOG00000018995	smarcad1a	98	77.778	Gadus_morhua
ENSCSEG00000017903	smarcad1a	76	58.912	ENSGALG00000037339	SMARCAD1	98	57.143	Gallus_gallus
ENSCSEG00000017903	smarcad1a	100	64.969	ENSGAFG00000013498	smarcad1a	100	64.669	Gambusia_affinis
ENSCSEG00000017903	smarcad1a	83	81.232	ENSGACG00000007327	smarcad1a	99	81.586	Gasterosteus_aculeatus
ENSCSEG00000017903	smarcad1a	100	53.254	ENSGAGG00000008582	SMARCAD1	97	62.968	Gopherus_agassizii
ENSCSEG00000017903	smarcad1a	100	46.784	ENSGGOG00000023001	SMARCAD1	100	62.391	Gorilla_gorilla
ENSCSEG00000017903	smarcad1a	100	70.442	ENSHBUG00000011042	smarcad1a	100	71.190	Haplochromis_burtoni
ENSCSEG00000017903	smarcad1a	100	46.661	ENSHGLG00000005070	SMARCAD1	100	62.536	Heterocephalus_glaber_female
ENSCSEG00000017903	smarcad1a	100	46.661	ENSHGLG00100006812	SMARCAD1	100	62.536	Heterocephalus_glaber_male
ENSCSEG00000017903	smarcad1a	100	60.781	ENSHCOG00000007848	smarcad1a	85	66.315	Hippocampus_comes
ENSCSEG00000017903	smarcad1a	99	53.967	ENSIPUG00000000242	smarcad1a	96	56.956	Ictalurus_punctatus
ENSCSEG00000017903	smarcad1a	72	70.687	ENSIPUG00000022817	smarcad1b	84	68.529	Ictalurus_punctatus
ENSCSEG00000017903	smarcad1a	97	59.054	ENSSTOG00000001227	SMARCAD1	100	61.175	Ictidomys_tridecemlineatus
ENSCSEG00000017903	smarcad1a	100	46.856	ENSJJAG00000022342	Smarcad1	96	62.946	Jaculus_jaculus
ENSCSEG00000017903	smarcad1a	98	68.139	ENSKMAG00000021351	smarcad1a	99	67.317	Kryptolebias_marmoratus
ENSCSEG00000017903	smarcad1a	100	70.233	ENSLBEG00000008088	smarcad1a	99	69.972	Labrus_bergylta
ENSCSEG00000017903	smarcad1a	86	70.359	ENSLOCG00000012909	smarcad1a	96	70.191	Lepisosteus_oculatus
ENSCSEG00000017903	smarcad1a	98	58.848	ENSLAFG00000000040	SMARCAD1	100	61.224	Loxodonta_africana
ENSCSEG00000017903	smarcad1a	100	46.872	ENSMFAG00000042606	SMARCAD1	100	62.536	Macaca_fascicularis
ENSCSEG00000017903	smarcad1a	90	51.077	ENSMMUG00000022242	SMARCAD1	98	62.536	Macaca_mulatta
ENSCSEG00000017903	smarcad1a	100	46.872	ENSMNEG00000038117	SMARCAD1	100	65.772	Macaca_nemestrina
ENSCSEG00000017903	smarcad1a	100	46.872	ENSMLEG00000038333	SMARCAD1	100	65.772	Mandrillus_leucophaeus
ENSCSEG00000017903	smarcad1a	100	72.082	ENSMAMG00000000933	smarcad1a	100	72.176	Mastacembelus_armatus
ENSCSEG00000017903	smarcad1a	100	69.153	ENSMZEG00005005203	smarcad1a	100	69.888	Maylandia_zebra
ENSCSEG00000017903	smarcad1a	81	62.385	ENSMGAG00000005577	SMARCAD1	90	62.385	Meleagris_gallopavo
ENSCSEG00000017903	smarcad1a	100	47.318	ENSMAUG00000008417	Smarcad1	70	60.839	Mesocricetus_auratus
ENSCSEG00000017903	smarcad1a	100	58.777	ENSMICG00000009746	SMARCAD1	100	62.209	Microcebus_murinus
ENSCSEG00000017903	smarcad1a	100	46.737	ENSMOCG00000017142	Smarcad1	97	62.798	Microtus_ochrogaster
ENSCSEG00000017903	smarcad1a	70	82.955	ENSMMOG00000000275	smarcad1a	100	79.714	Mola_mola
ENSCSEG00000017903	smarcad1a	100	46.850	ENSMODG00000019268	SMARCAD1	96	63.393	Monodelphis_domestica
ENSCSEG00000017903	smarcad1a	88	51.538	MGP_CAROLIEiJ_G0028458	-	67	50.000	Mus_caroli
ENSCSEG00000017903	smarcad1a	100	45.941	ENSMUSG00000029920	Smarcad1	66	62.649	Mus_musculus
ENSCSEG00000017903	smarcad1a	100	46.387	MGP_PahariEiJ_G0022198	Smarcad1	66	62.649	Mus_pahari
ENSCSEG00000017903	smarcad1a	100	45.852	MGP_SPRETEiJ_G0029462	Smarcad1	66	62.649	Mus_spretus
ENSCSEG00000017903	smarcad1a	98	59.863	ENSMPUG00000002111	SMARCAD1	100	62.099	Mustela_putorius_furo
ENSCSEG00000017903	smarcad1a	98	59.862	ENSMLUG00000000425	SMARCAD1	100	62.064	Myotis_lucifugus
ENSCSEG00000017903	smarcad1a	100	47.373	ENSNGAG00000000810	Smarcad1	99	63.244	Nannospalax_galili
ENSCSEG00000017903	smarcad1a	74	76.306	ENSNBRG00000012749	smarcad1a	97	75.616	Neolamprologus_brichardi
ENSCSEG00000017903	smarcad1a	100	46.784	ENSNLEG00000014225	SMARCAD1	100	65.772	Nomascus_leucogenys
ENSCSEG00000017903	smarcad1a	100	46.790	ENSODEG00000004334	SMARCAD1	100	62.536	Octodon_degus
ENSCSEG00000017903	smarcad1a	84	83.463	ENSONIG00000015059	smarcad1a	100	79.506	Oreochromis_niloticus
ENSCSEG00000017903	smarcad1a	69	65.891	ENSOANG00000013764	SMARCAD1	93	63.173	Ornithorhynchus_anatinus
ENSCSEG00000017903	smarcad1a	100	46.520	ENSOCUG00000017283	SMARCAD1	100	62.099	Oryctolagus_cuniculus
ENSCSEG00000017903	smarcad1a	100	64.339	ENSORLG00000004869	smarcad1a	100	64.345	Oryzias_latipes
ENSCSEG00000017903	smarcad1a	100	64.690	ENSORLG00020020569	smarcad1a	100	64.695	Oryzias_latipes_hni
ENSCSEG00000017903	smarcad1a	100	64.875	ENSORLG00015009045	smarcad1a	100	64.880	Oryzias_latipes_hsok
ENSCSEG00000017903	smarcad1a	99	65.485	ENSOMEG00000023032	smarcad1a	100	65.511	Oryzias_melastigma
ENSCSEG00000017903	smarcad1a	100	58.245	ENSOGAG00000011444	SMARCAD1	100	62.064	Otolemur_garnettii
ENSCSEG00000017903	smarcad1a	100	46.608	ENSOARG00000017851	SMARCAD1	100	62.099	Ovis_aries
ENSCSEG00000017903	smarcad1a	100	46.784	ENSPPAG00000035715	SMARCAD1	100	62.391	Pan_paniscus
ENSCSEG00000017903	smarcad1a	100	47.230	ENSPPRG00000024756	SMARCAD1	100	65.772	Panthera_pardus
ENSCSEG00000017903	smarcad1a	100	47.234	ENSPTIG00000017868	SMARCAD1	100	62.064	Panthera_tigris_altaica
ENSCSEG00000017903	smarcad1a	100	46.784	ENSPTRG00000023126	SMARCAD1	100	65.772	Pan_troglodytes
ENSCSEG00000017903	smarcad1a	100	46.309	ENSPANG00000019757	SMARCAD1	99	63.005	Papio_anubis
ENSCSEG00000017903	smarcad1a	95	60.502	ENSPSIG00000010255	SMARCAD1	99	63.401	Pelodiscus_sinensis
ENSCSEG00000017903	smarcad1a	60	75.743	ENSPMGG00000010735	smarcad1a	97	73.646	Periophthalmus_magnuspinnatus
ENSCSEG00000017903	smarcad1a	90	44.813	ENSPEMG00000001854	Smarcad1	100	54.891	Peromyscus_maniculatus_bairdii
ENSCSEG00000017903	smarcad1a	80	53.138	ENSPMAG00000003516	smarcad1a	97	53.138	Petromyzon_marinus
ENSCSEG00000017903	smarcad1a	72	63.542	ENSPCIG00000008137	SMARCAD1	90	63.542	Phascolarctos_cinereus
ENSCSEG00000017903	smarcad1a	100	66.517	ENSPFOG00000019116	smarcad1a	100	66.248	Poecilia_formosa
ENSCSEG00000017903	smarcad1a	100	66.428	ENSPLAG00000000108	smarcad1a	100	66.159	Poecilia_latipinna
ENSCSEG00000017903	smarcad1a	100	66.517	ENSPMEG00000009155	smarcad1a	100	66.248	Poecilia_mexicana
ENSCSEG00000017903	smarcad1a	100	68.975	ENSPREG00000018185	smarcad1a	100	68.790	Poecilia_reticulata
ENSCSEG00000017903	smarcad1a	100	46.262	ENSPPYG00000014935	SMARCAD1	100	61.773	Pongo_abelii
ENSCSEG00000017903	smarcad1a	58	57.443	ENSPCOG00000020478	SMARCAD1	68	60.245	Propithecus_coquereli
ENSCSEG00000017903	smarcad1a	100	45.662	ENSPVAG00000001760	SMARCAD1	100	61.404	Pteropus_vampyrus
ENSCSEG00000017903	smarcad1a	73	76.081	ENSPNYG00000010087	smarcad1a	97	74.939	Pundamilia_nyererei
ENSCSEG00000017903	smarcad1a	100	55.389	ENSPNAG00000001663	smarcad1a	100	54.902	Pygocentrus_nattereri
ENSCSEG00000017903	smarcad1a	75	68.750	ENSPNAG00000010099	smarcad1b	82	68.391	Pygocentrus_nattereri
ENSCSEG00000017903	smarcad1a	100	46.690	ENSRNOG00000006391	Smarcad1	65	63.244	Rattus_norvegicus
ENSCSEG00000017903	smarcad1a	100	46.872	ENSRBIG00000041989	SMARCAD1	100	62.536	Rhinopithecus_bieti
ENSCSEG00000017903	smarcad1a	100	46.872	ENSRROG00000035309	SMARCAD1	100	62.536	Rhinopithecus_roxellana
ENSCSEG00000017903	smarcad1a	100	46.790	ENSSBOG00000032114	SMARCAD1	100	65.940	Saimiri_boliviensis_boliviensis
ENSCSEG00000017903	smarcad1a	88	63.690	ENSSHAG00000001279	SMARCAD1	96	63.690	Sarcophilus_harrisii
ENSCSEG00000017903	smarcad1a	100	57.486	ENSSFOG00015016814	smarcad1b	100	56.759	Scleropages_formosus
ENSCSEG00000017903	smarcad1a	64	69.477	ENSSFOG00015020909	smarcad1a	91	69.477	Scleropages_formosus
ENSCSEG00000017903	smarcad1a	100	73.699	ENSSMAG00000001326	smarcad1a	100	73.810	Scophthalmus_maximus
ENSCSEG00000017903	smarcad1a	76	79.328	ENSSDUG00000022338	smarcad1a	99	77.365	Seriola_dumerili
ENSCSEG00000017903	smarcad1a	100	70.248	ENSSLDG00000024986	smarcad1a	100	71.006	Seriola_lalandi_dorsalis
ENSCSEG00000017903	smarcad1a	56	66.891	ENSSPUG00000004633	SMARCAD1	99	67.059	Sphenodon_punctatus
ENSCSEG00000017903	smarcad1a	100	72.544	ENSSPAG00000001970	smarcad1a	100	72.544	Stegastes_partitus
ENSCSEG00000017903	smarcad1a	100	46.831	ENSSSCG00000009193	SMARCAD1	100	62.245	Sus_scrofa
ENSCSEG00000017903	smarcad1a	64	65.576	ENSTGUG00000003127	SMARCAD1	94	63.280	Taeniopygia_guttata
ENSCSEG00000017903	smarcad1a	91	67.322	ENSTNIG00000017585	smarcad1a	96	80.456	Tetraodon_nigroviridis
ENSCSEG00000017903	smarcad1a	79	67.460	ENSTBEG00000002789	SMARCAD1	60	67.762	Tupaia_belangeri
ENSCSEG00000017903	smarcad1a	90	50.517	ENSTTRG00000000226	SMARCAD1	87	62.574	Tursiops_truncatus
ENSCSEG00000017903	smarcad1a	98	60.137	ENSUAMG00000022262	SMARCAD1	100	62.391	Ursus_americanus
ENSCSEG00000017903	smarcad1a	98	60.000	ENSUMAG00000004549	SMARCAD1	100	62.245	Ursus_maritimus
ENSCSEG00000017903	smarcad1a	98	60.000	ENSVVUG00000007271	SMARCAD1	100	62.099	Vulpes_vulpes
ENSCSEG00000017903	smarcad1a	83	55.495	ENSXETG00000019214	smarcad1	94	57.266	Xenopus_tropicalis
ENSCSEG00000017903	smarcad1a	71	88.372	ENSXCOG00000005232	smarcad1a	85	87.500	Xiphophorus_couchianus
ENSCSEG00000017903	smarcad1a	100	65.956	ENSXMAG00000015350	smarcad1a	100	65.893	Xiphophorus_maculatus