EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000017912 (Gene tree)
Gene ID: 103394425
Gene Symbol: nup153
Alias: fd23d09|si:ch211-153f2.5|wu:fd23d09
Full Name: nucleoporin 153
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 9162 bases
Position: chr18:10994278-11003439
Accession: 103394425
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000028041	zf-RanBP	PF00641.18	9.8e-32	1	4
ENSCSEP00000028041	zf-RanBP	PF00641.18	9.8e-32	2	4
ENSCSEP00000028041	zf-RanBP	PF00641.18	9.8e-32	3	4
ENSCSEP00000028041	zf-RanBP	PF00641.18	9.8e-32	4	4
ENSCSEP00000028031	zf-RanBP	PF00641.18	1.1e-31	1	4
ENSCSEP00000028031	zf-RanBP	PF00641.18	1.1e-31	2	4
ENSCSEP00000028031	zf-RanBP	PF00641.18	1.1e-31	3	4
ENSCSEP00000028031	zf-RanBP	PF00641.18	1.1e-31	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000028417	-	4911	XM_017041289	ENSCSEP00000028041	1412 (aa)	XP_016896778	-
ENSCSET00000028406	-	5010	XM_008331726	ENSCSEP00000028031	1445 (aa)	XP_008329948	UPI000495E230

Gene Model

Click here to download ENSCSEG00000017912's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000017912's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000017912	nup153	98	40.819	ENSG00000124789	NUP153	99	40.941	Homo_sapiens
ENSCSEG00000017912	nup153	60	72.096	ENSAPOG00000019495	nup153	100	67.484	Acanthochromis_polyacanthus
ENSCSEG00000017912	nup153	98	41.715	ENSAMEG00000000721	NUP153	99	40.668	Ailuropoda_melanoleuca
ENSCSEG00000017912	nup153	99	62.368	ENSACIG00000010784	nup153	100	60.972	Amphilophus_citrinellus
ENSCSEG00000017912	nup153	99	65.881	ENSAOCG00000007098	nup153	100	66.536	Amphiprion_ocellaris
ENSCSEG00000017912	nup153	100	68.414	ENSAPEG00000012075	nup153	100	69.126	Amphiprion_percula
ENSCSEG00000017912	nup153	99	65.951	ENSATEG00000014134	nup153	100	66.949	Anabas_testudineus
ENSCSEG00000017912	nup153	97	38.928	ENSACAG00000004118	NUP153	99	38.786	Anolis_carolinensis
ENSCSEG00000017912	nup153	98	41.034	ENSANAG00000001808	NUP153	99	41.184	Aotus_nancymaae
ENSCSEG00000017912	nup153	100	66.430	ENSACLG00000016592	nup153	100	66.495	Astatotilapia_calliptera
ENSCSEG00000017912	nup153	99	50.872	ENSAMXG00000021025	nup153	100	51.667	Astyanax_mexicanus
ENSCSEG00000017912	nup153	98	41.180	ENSBTAG00000017128	NUP153	99	40.434	Bos_taurus
ENSCSEG00000017912	nup153	98	41.549	ENSCJAG00000006685	NUP153	99	41.784	Callithrix_jacchus
ENSCSEG00000017912	nup153	98	41.068	ENSCAFG00000010146	NUP153	99	39.937	Canis_familiaris
ENSCSEG00000017912	nup153	98	41.259	ENSCAFG00020010901	NUP153	99	40.063	Canis_lupus_dingo
ENSCSEG00000017912	nup153	98	40.365	ENSCHIG00000023764	NUP153	99	40.687	Capra_hircus
ENSCSEG00000017912	nup153	97	41.326	ENSTSYG00000001251	NUP153	98	40.143	Carlito_syrichta
ENSCSEG00000017912	nup153	98	41.045	ENSCPOG00000004007	NUP153	99	40.153	Cavia_porcellus
ENSCSEG00000017912	nup153	98	39.334	ENSCCAG00000024038	NUP153	99	39.069	Cebus_capucinus
ENSCSEG00000017912	nup153	98	41.618	ENSCATG00000041429	NUP153	99	41.087	Cercocebus_atys
ENSCSEG00000017912	nup153	98	40.343	ENSCLAG00000001915	NUP153	99	40.331	Chinchilla_lanigera
ENSCSEG00000017912	nup153	98	41.490	ENSCSAG00000007624	NUP153	99	40.659	Chlorocebus_sabaeus
ENSCSEG00000017912	nup153	84	34.105	ENSCHOG00000003510	-	62	39.340	Choloepus_hoffmanni
ENSCSEG00000017912	nup153	78	33.167	ENSCHOG00000007137	-	60	38.793	Choloepus_hoffmanni
ENSCSEG00000017912	nup153	98	40.567	ENSCPBG00000008333	NUP153	99	40.486	Chrysemys_picta_bellii
ENSCSEG00000017912	nup153	98	39.910	ENSCANG00000033390	NUP153	99	39.130	Colobus_angolensis_palliatus
ENSCSEG00000017912	nup153	98	41.559	ENSCGRG00001021016	Nup153	99	41.176	Cricetulus_griseus_chok1gshd
ENSCSEG00000017912	nup153	97	41.530	ENSCGRG00000009244	Nup153	100	41.292	Cricetulus_griseus_crigri
ENSCSEG00000017912	nup153	71	66.197	ENSCVAG00000020646	nup153	99	60.810	Cyprinodon_variegatus
ENSCSEG00000017912	nup153	99	52.359	ENSDARG00000099972	nup153	100	52.903	Danio_rerio
ENSCSEG00000017912	nup153	98	39.885	ENSDNOG00000001153	NUP153	99	40.064	Dasypus_novemcinctus
ENSCSEG00000017912	nup153	98	41.218	ENSDORG00000001736	Nup153	99	41.252	Dipodomys_ordii
ENSCSEG00000017912	nup153	67	59.155	ENSETEG00000010324	-	52	59.155	Echinops_telfairi
ENSCSEG00000017912	nup153	98	41.049	ENSEASG00005009945	NUP153	99	40.790	Equus_asinus_asinus
ENSCSEG00000017912	nup153	98	40.892	ENSECAG00000016010	NUP153	99	40.611	Equus_caballus
ENSCSEG00000017912	nup153	74	44.512	ENSEEUG00000010183	NUP153	74	42.615	Erinaceus_europaeus
ENSCSEG00000017912	nup153	99	52.225	ENSELUG00000019108	nup153	100	53.478	Esox_lucius
ENSCSEG00000017912	nup153	98	41.603	ENSFCAG00000011583	NUP153	99	40.025	Felis_catus
ENSCSEG00000017912	nup153	93	39.647	ENSFALG00000013388	NUP153	99	38.803	Ficedula_albicollis
ENSCSEG00000017912	nup153	91	78.141	ENSFHEG00000013401	nup153	99	78.141	Fundulus_heteroclitus
ENSCSEG00000017912	nup153	89	63.636	ENSGMOG00000010422	nup153	92	57.862	Gadus_morhua
ENSCSEG00000017912	nup153	98	40.741	ENSGALG00000012720	NUP153	99	41.618	Gallus_gallus
ENSCSEG00000017912	nup153	99	59.855	ENSGAFG00000010927	nup153	100	59.136	Gambusia_affinis
ENSCSEG00000017912	nup153	99	65.749	ENSGACG00000005389	nup153	100	66.241	Gasterosteus_aculeatus
ENSCSEG00000017912	nup153	98	40.956	ENSGAGG00000022386	NUP153	99	40.243	Gopherus_agassizii
ENSCSEG00000017912	nup153	98	40.051	ENSGGOG00000014261	NUP153	99	41.736	Gorilla_gorilla
ENSCSEG00000017912	nup153	100	67.270	ENSHBUG00000002944	nup153	100	67.247	Haplochromis_burtoni
ENSCSEG00000017912	nup153	98	40.507	ENSHGLG00000007924	NUP153	99	39.820	Heterocephalus_glaber_female
ENSCSEG00000017912	nup153	98	40.507	ENSHGLG00100001529	NUP153	99	39.820	Heterocephalus_glaber_male
ENSCSEG00000017912	nup153	99	56.295	ENSHCOG00000019361	nup153	100	56.984	Hippocampus_comes
ENSCSEG00000017912	nup153	99	52.851	ENSIPUG00000014605	nup153	100	51.997	Ictalurus_punctatus
ENSCSEG00000017912	nup153	97	41.375	ENSSTOG00000005807	NUP153	100	39.947	Ictidomys_tridecemlineatus
ENSCSEG00000017912	nup153	98	40.476	ENSJJAG00000016760	Nup153	99	40.077	Jaculus_jaculus
ENSCSEG00000017912	nup153	99	63.863	ENSKMAG00000006344	nup153	100	64.491	Kryptolebias_marmoratus
ENSCSEG00000017912	nup153	100	65.113	ENSLBEG00000002982	nup153	100	63.878	Labrus_bergylta
ENSCSEG00000017912	nup153	97	38.217	ENSLACG00000006480	NUP153	99	37.484	Latimeria_chalumnae
ENSCSEG00000017912	nup153	99	48.134	ENSLOCG00000008267	nup153	100	47.557	Lepisosteus_oculatus
ENSCSEG00000017912	nup153	98	40.842	ENSLAFG00000015905	NUP153	99	39.810	Loxodonta_africana
ENSCSEG00000017912	nup153	98	41.463	ENSMFAG00000045732	NUP153	99	40.673	Macaca_fascicularis
ENSCSEG00000017912	nup153	98	41.528	ENSMMUG00000001993	NUP153	99	40.834	Macaca_mulatta
ENSCSEG00000017912	nup153	98	41.528	ENSMNEG00000038011	NUP153	99	40.834	Macaca_nemestrina
ENSCSEG00000017912	nup153	98	41.683	ENSMLEG00000030776	NUP153	99	40.961	Mandrillus_leucophaeus
ENSCSEG00000017912	nup153	100	65.546	ENSMAMG00000013184	nup153	100	66.602	Mastacembelus_armatus
ENSCSEG00000017912	nup153	99	64.539	ENSMZEG00005004371	nup153	100	62.549	Maylandia_zebra
ENSCSEG00000017912	nup153	97	40.289	ENSMGAG00000003139	NUP153	99	40.482	Meleagris_gallopavo
ENSCSEG00000017912	nup153	98	39.831	ENSMAUG00000007737	Nup153	91	42.230	Mesocricetus_auratus
ENSCSEG00000017912	nup153	98	40.558	ENSMICG00000006089	NUP153	99	39.516	Microcebus_murinus
ENSCSEG00000017912	nup153	98	41.973	ENSMOCG00000007623	Nup153	99	41.135	Microtus_ochrogaster
ENSCSEG00000017912	nup153	99	61.813	ENSMMOG00000019049	nup153	100	62.767	Mola_mola
ENSCSEG00000017912	nup153	97	41.337	ENSMODG00000010951	NUP153	99	40.182	Monodelphis_domestica
ENSCSEG00000017912	nup153	99	62.761	ENSMALG00000013995	nup153	100	64.386	Monopterus_albus
ENSCSEG00000017912	nup153	98	41.024	MGP_CAROLIEiJ_G0018483	Nup153	99	40.025	Mus_caroli
ENSCSEG00000017912	nup153	98	41.299	ENSMUSG00000021374	Nup153	99	40.670	Mus_musculus
ENSCSEG00000017912	nup153	98	41.634	MGP_PahariEiJ_G0019551	Nup153	99	40.689	Mus_pahari
ENSCSEG00000017912	nup153	98	41.184	MGP_SPRETEiJ_G0019363	Nup153	99	40.472	Mus_spretus
ENSCSEG00000017912	nup153	98	40.215	ENSMLUG00000004775	NUP153	99	38.476	Myotis_lucifugus
ENSCSEG00000017912	nup153	98	41.070	ENSNGAG00000013817	Nup153	99	39.911	Nannospalax_galili
ENSCSEG00000017912	nup153	99	63.913	ENSNBRG00000012456	nup153	100	63.757	Neolamprologus_brichardi
ENSCSEG00000017912	nup153	98	41.233	ENSNLEG00000001141	NUP153	99	41.068	Nomascus_leucogenys
ENSCSEG00000017912	nup153	76	56.667	ENSMEUG00000012874	NUP153	74	56.970	Notamacropus_eugenii
ENSCSEG00000017912	nup153	88	44.422	ENSOPRG00000006221	NUP153	85	43.457	Ochotona_princeps
ENSCSEG00000017912	nup153	98	39.503	ENSODEG00000005620	NUP153	99	39.069	Octodon_degus
ENSCSEG00000017912	nup153	100	66.667	ENSONIG00000002524	nup153	100	66.968	Oreochromis_niloticus
ENSCSEG00000017912	nup153	97	41.958	ENSOANG00000011858	NUP153	99	41.688	Ornithorhynchus_anatinus
ENSCSEG00000017912	nup153	98	41.040	ENSOCUG00000003064	NUP153	99	39.936	Oryctolagus_cuniculus
ENSCSEG00000017912	nup153	100	60.906	ENSORLG00000012674	nup153	100	60.793	Oryzias_latipes
ENSCSEG00000017912	nup153	100	61.399	ENSORLG00020006026	nup153	100	61.353	Oryzias_latipes_hni
ENSCSEG00000017912	nup153	100	61.021	ENSORLG00015013823	nup153	100	60.974	Oryzias_latipes_hsok
ENSCSEG00000017912	nup153	99	61.629	ENSOMEG00000012062	nup153	100	61.858	Oryzias_melastigma
ENSCSEG00000017912	nup153	98	39.548	ENSOGAG00000014899	NUP153	99	38.941	Otolemur_garnettii
ENSCSEG00000017912	nup153	97	39.644	ENSOARG00000011514	NUP153	99	40.155	Ovis_aries
ENSCSEG00000017912	nup153	98	40.601	ENSPPAG00000029729	NUP153	99	41.929	Pan_paniscus
ENSCSEG00000017912	nup153	98	41.117	ENSPPRG00000006160	NUP153	99	39.962	Panthera_pardus
ENSCSEG00000017912	nup153	98	40.762	ENSPTIG00000017212	NUP153	99	39.581	Panthera_tigris_altaica
ENSCSEG00000017912	nup153	98	40.736	ENSPTRG00000017752	NUP153	99	41.994	Pan_troglodytes
ENSCSEG00000017912	nup153	98	41.146	ENSPANG00000015139	NUP153	99	41.233	Papio_anubis
ENSCSEG00000017912	nup153	99	46.004	ENSPKIG00000001734	nup153	100	45.012	Paramormyrops_kingsleyae
ENSCSEG00000017912	nup153	97	39.948	ENSPSIG00000017226	NUP153	99	40.105	Pelodiscus_sinensis
ENSCSEG00000017912	nup153	99	57.077	ENSPMGG00000001716	nup153	100	58.167	Periophthalmus_magnuspinnatus
ENSCSEG00000017912	nup153	98	41.357	ENSPEMG00000020772	Nup153	99	40.115	Peromyscus_maniculatus_bairdii
ENSCSEG00000017912	nup153	58	41.905	ENSPMAG00000002487	-	100	41.905	Petromyzon_marinus
ENSCSEG00000017912	nup153	98	39.761	ENSPCIG00000029680	NUP153	99	40.253	Phascolarctos_cinereus
ENSCSEG00000017912	nup153	99	58.634	ENSPFOG00000013146	nup153	99	58.106	Poecilia_formosa
ENSCSEG00000017912	nup153	100	61.647	ENSPMEG00000021677	nup153	100	61.628	Poecilia_mexicana
ENSCSEG00000017912	nup153	100	62.307	ENSPREG00000007463	nup153	100	61.336	Poecilia_reticulata
ENSCSEG00000017912	nup153	98	40.170	ENSPPYG00000016259	NUP153	99	41.009	Pongo_abelii
ENSCSEG00000017912	nup153	65	52.817	ENSPCAG00000010444	NUP153	63	52.249	Procavia_capensis
ENSCSEG00000017912	nup153	98	40.077	ENSPCOG00000014488	NUP153	99	38.471	Propithecus_coquereli
ENSCSEG00000017912	nup153	95	39.404	ENSPVAG00000012632	NUP153	99	39.168	Pteropus_vampyrus
ENSCSEG00000017912	nup153	99	66.558	ENSPNYG00000011225	nup153	100	66.429	Pundamilia_nyererei
ENSCSEG00000017912	nup153	99	53.455	ENSPNAG00000024377	nup153	100	52.440	Pygocentrus_nattereri
ENSCSEG00000017912	nup153	98	41.131	ENSRNOG00000001456	Nup153	99	41.651	Rattus_norvegicus
ENSCSEG00000017912	nup153	98	39.575	ENSRBIG00000041878	NUP153	99	40.089	Rhinopithecus_bieti
ENSCSEG00000017912	nup153	97	40.361	ENSRROG00000029849	NUP153	99	40.941	Rhinopithecus_roxellana
ENSCSEG00000017912	nup153	98	40.926	ENSSBOG00000024532	NUP153	99	41.948	Saimiri_boliviensis_boliviensis
ENSCSEG00000017912	nup153	61	38.971	ENSSHAG00000016087	-	95	39.006	Sarcophilus_harrisii
ENSCSEG00000017912	nup153	99	47.684	ENSSFOG00015011040	nup153	100	48.793	Scleropages_formosus
ENSCSEG00000017912	nup153	100	68.176	ENSSMAG00000008418	nup153	100	68.341	Scophthalmus_maximus
ENSCSEG00000017912	nup153	61	75.978	ENSSDUG00000010779	nup153	100	70.089	Seriola_dumerili
ENSCSEG00000017912	nup153	60	71.829	ENSSLDG00000012692	nup153	100	65.524	Seriola_lalandi_dorsalis
ENSCSEG00000017912	nup153	85	55.556	ENSSARG00000013269	NUP153	87	56.061	Sorex_araneus
ENSCSEG00000017912	nup153	98	40.627	ENSSPUG00000016687	NUP153	99	40.333	Sphenodon_punctatus
ENSCSEG00000017912	nup153	100	68.421	ENSSPAG00000014945	nup153	100	68.299	Stegastes_partitus
ENSCSEG00000017912	nup153	98	41.263	ENSSSCG00000026034	NUP153	99	40.138	Sus_scrofa
ENSCSEG00000017912	nup153	97	39.394	ENSTGUG00000005917	NUP153	100	38.521	Taeniopygia_guttata
ENSCSEG00000017912	nup153	99	60.130	ENSTRUG00000010163	nup153	100	59.049	Takifugu_rubripes
ENSCSEG00000017912	nup153	99	59.432	ENSTNIG00000009182	nup153	100	59.724	Tetraodon_nigroviridis
ENSCSEG00000017912	nup153	70	40.723	ENSTBEG00000004161	NUP153	62	39.342	Tupaia_belangeri
ENSCSEG00000017912	nup153	94	40.640	ENSTTRG00000007060	NUP153	51	44.118	Tursiops_truncatus
ENSCSEG00000017912	nup153	61	37.178	ENSUAMG00000015215	NUP153	97	35.822	Ursus_americanus
ENSCSEG00000017912	nup153	97	40.182	ENSUMAG00000017135	NUP153	99	38.160	Ursus_maritimus
ENSCSEG00000017912	nup153	98	40.408	ENSVPAG00000002072	NUP153	99	40.698	Vicugna_pacos
ENSCSEG00000017912	nup153	98	41.300	ENSVVUG00000003265	NUP153	99	40.076	Vulpes_vulpes
ENSCSEG00000017912	nup153	98	39.697	ENSXETG00000014197	nup153	99	38.346	Xenopus_tropicalis
ENSCSEG00000017912	nup153	99	60.640	ENSXCOG00000020098	nup153	100	60.705	Xiphophorus_couchianus
ENSCSEG00000017912	nup153	100	62.182	ENSXMAG00000003437	nup153	100	62.468	Xiphophorus_maculatus