EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000017954 (Gene tree)
Gene ID: 103378489
Gene Symbol: nmd3
Alias: nmd3l|zgc:113103
Full Name: NMD3 ribosome export adaptor
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 12029 bases
Position: chr4:17429500-17441528
Accession: 103378489
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000028120	NMD3	PF04981.13	7.7e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000028495	-	5402	XM_008309730	ENSCSEP00000028120	504 (aa)	XP_008307952	UPI00049754DF

Gene Model

Click here to download ENSCSEG00000017954's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03008	Ribosome biogenesis in eukaryotes	KEGG
csem03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000017954's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000017954	nmd3	99	77.555	ENSG00000169251	NMD3	100	79.817	Homo_sapiens
ENSCSEG00000017954	nmd3	100	93.651	ENSAPOG00000022912	nmd3	100	93.651	Acanthochromis_polyacanthus
ENSCSEG00000017954	nmd3	99	77.030	ENSAMEG00000001584	NMD3	99	77.030	Ailuropoda_melanoleuca
ENSCSEG00000017954	nmd3	100	88.690	ENSACIG00000015196	nmd3	100	88.690	Amphilophus_citrinellus
ENSCSEG00000017954	nmd3	100	94.246	ENSAOCG00000009086	nmd3	100	94.246	Amphiprion_ocellaris
ENSCSEG00000017954	nmd3	100	94.246	ENSAPEG00000000329	nmd3	100	94.246	Amphiprion_percula
ENSCSEG00000017954	nmd3	100	94.643	ENSATEG00000014351	nmd3	100	94.643	Anabas_testudineus
ENSCSEG00000017954	nmd3	100	76.832	ENSAPLG00000014786	NMD3	100	76.832	Anas_platyrhynchos
ENSCSEG00000017954	nmd3	100	80.396	ENSACAG00000007349	NMD3	100	80.396	Anolis_carolinensis
ENSCSEG00000017954	nmd3	99	77.600	ENSANAG00000026434	NMD3	99	77.600	Aotus_nancymaae
ENSCSEG00000017954	nmd3	100	93.849	ENSACLG00000015520	nmd3	100	93.849	Astatotilapia_calliptera
ENSCSEG00000017954	nmd3	100	88.690	ENSAMXG00000014415	nmd3	100	88.690	Astyanax_mexicanus
ENSCSEG00000017954	nmd3	99	77.183	ENSBTAG00000016228	NMD3	100	77.183	Bos_taurus
ENSCSEG00000017954	nmd3	96	49.393	WBGene00012030	T25G3.3	96	49.393	Caenorhabditis_elegans
ENSCSEG00000017954	nmd3	99	77.711	ENSCJAG00000002900	NMD3	97	77.711	Callithrix_jacchus
ENSCSEG00000017954	nmd3	99	77.108	ENSCAFG00000014352	NMD3	97	77.108	Canis_familiaris
ENSCSEG00000017954	nmd3	99	76.786	ENSCAFG00020021145	NMD3	99	76.786	Canis_lupus_dingo
ENSCSEG00000017954	nmd3	99	76.587	ENSCHIG00000016015	NMD3	100	76.587	Capra_hircus
ENSCSEG00000017954	nmd3	99	77.381	ENSTSYG00000002155	NMD3	99	77.381	Carlito_syrichta
ENSCSEG00000017954	nmd3	79	76.000	ENSCAPG00000017861	NMD3	93	76.000	Cavia_aperea
ENSCSEG00000017954	nmd3	87	76.659	ENSCPOG00000005953	NMD3	94	76.659	Cavia_porcellus
ENSCSEG00000017954	nmd3	99	77.976	ENSCCAG00000037460	NMD3	100	77.976	Cebus_capucinus
ENSCSEG00000017954	nmd3	99	77.976	ENSCATG00000030022	NMD3	100	77.976	Cercocebus_atys
ENSCSEG00000017954	nmd3	99	78.373	ENSCLAG00000003155	NMD3	100	78.373	Chinchilla_lanigera
ENSCSEG00000017954	nmd3	99	77.976	ENSCSAG00000012333	NMD3	100	77.976	Chlorocebus_sabaeus
ENSCSEG00000017954	nmd3	80	76.761	ENSCHOG00000001240	NMD3	80	76.761	Choloepus_hoffmanni
ENSCSEG00000017954	nmd3	99	81.944	ENSCPBG00000018318	NMD3	99	82.278	Chrysemys_picta_bellii
ENSCSEG00000017954	nmd3	97	54.675	ENSCING00000002129	-	97	54.675	Ciona_intestinalis
ENSCSEG00000017954	nmd3	87	54.091	ENSCSAVG00000001120	-	97	54.091	Ciona_savignyi
ENSCSEG00000017954	nmd3	99	71.968	ENSCANG00000042939	NMD3	95	71.968	Colobus_angolensis_palliatus
ENSCSEG00000017954	nmd3	91	68.113	ENSCGRG00001001792	Nmd3	97	68.113	Cricetulus_griseus_chok1gshd
ENSCSEG00000017954	nmd3	97	77.393	ENSCGRG00000007947	Nmd3	98	77.393	Cricetulus_griseus_crigri
ENSCSEG00000017954	nmd3	100	83.730	ENSCVAG00000004672	nmd3	100	84.127	Cyprinodon_variegatus
ENSCSEG00000017954	nmd3	100	86.535	ENSDARG00000015676	nmd3	100	86.535	Danio_rerio
ENSCSEG00000017954	nmd3	99	76.389	ENSDNOG00000045222	NMD3	100	76.389	Dasypus_novemcinctus
ENSCSEG00000017954	nmd3	97	70.961	ENSDORG00000005716	Nmd3	100	72.368	Dipodomys_ordii
ENSCSEG00000017954	nmd3	97	53.414	FBgn0023542	Nmd3	95	53.414	Drosophila_melanogaster
ENSCSEG00000017954	nmd3	99	67.063	ENSETEG00000003168	NMD3	99	67.063	Echinops_telfairi
ENSCSEG00000017954	nmd3	89	58.575	ENSEBUG00000014316	nmd3	97	58.575	Eptatretus_burgeri
ENSCSEG00000017954	nmd3	99	77.579	ENSEASG00005018672	NMD3	100	77.579	Equus_asinus_asinus
ENSCSEG00000017954	nmd3	99	77.912	ENSECAG00000000188	NMD3	97	77.912	Equus_caballus
ENSCSEG00000017954	nmd3	94	56.144	ENSEEUG00000010642	-	100	56.144	Erinaceus_europaeus
ENSCSEG00000017954	nmd3	100	90.278	ENSELUG00000024123	nmd3	100	90.278	Esox_lucius
ENSCSEG00000017954	nmd3	99	78.200	ENSFCAG00000022867	NMD3	99	77.976	Felis_catus
ENSCSEG00000017954	nmd3	94	79.789	ENSFALG00000008711	NMD3	100	79.789	Ficedula_albicollis
ENSCSEG00000017954	nmd3	99	76.238	ENSFDAG00000013724	-	100	76.238	Fukomys_damarensis
ENSCSEG00000017954	nmd3	97	64.300	ENSFDAG00000012197	-	98	64.476	Fukomys_damarensis
ENSCSEG00000017954	nmd3	100	91.468	ENSFHEG00000000415	nmd3	100	91.468	Fundulus_heteroclitus
ENSCSEG00000017954	nmd3	97	86.503	ENSGMOG00000009675	nmd3	100	86.503	Gadus_morhua
ENSCSEG00000017954	nmd3	100	79.208	ENSGALG00000009533	NMD3	100	79.208	Gallus_gallus
ENSCSEG00000017954	nmd3	99	92.555	ENSGAFG00000012798	nmd3	94	92.555	Gambusia_affinis
ENSCSEG00000017954	nmd3	100	91.468	ENSGACG00000010028	nmd3	100	91.468	Gasterosteus_aculeatus
ENSCSEG00000017954	nmd3	99	81.349	ENSGAGG00000006556	NMD3	99	81.349	Gopherus_agassizii
ENSCSEG00000017954	nmd3	99	77.778	ENSGGOG00000007157	NMD3	100	77.778	Gorilla_gorilla
ENSCSEG00000017954	nmd3	99	62.425	ENSGGOG00000028590	-	99	62.425	Gorilla_gorilla
ENSCSEG00000017954	nmd3	100	93.849	ENSHBUG00000001781	nmd3	100	93.849	Haplochromis_burtoni
ENSCSEG00000017954	nmd3	99	63.492	ENSHGLG00000010477	-	100	63.492	Heterocephalus_glaber_female
ENSCSEG00000017954	nmd3	99	77.381	ENSHGLG00000014451	-	100	77.381	Heterocephalus_glaber_female
ENSCSEG00000017954	nmd3	99	77.381	ENSHGLG00100006613	-	100	77.381	Heterocephalus_glaber_male
ENSCSEG00000017954	nmd3	99	63.889	ENSHGLG00100001042	-	100	63.889	Heterocephalus_glaber_male
ENSCSEG00000017954	nmd3	99	90.837	ENSHCOG00000004292	nmd3	92	90.837	Hippocampus_comes
ENSCSEG00000017954	nmd3	100	86.706	ENSIPUG00000005073	nmd3	100	86.706	Ictalurus_punctatus
ENSCSEG00000017954	nmd3	99	78.175	ENSSTOG00000001899	NMD3	100	78.175	Ictidomys_tridecemlineatus
ENSCSEG00000017954	nmd3	97	78.732	ENSJJAG00000019759	Nmd3	99	78.732	Jaculus_jaculus
ENSCSEG00000017954	nmd3	100	92.659	ENSKMAG00000020427	nmd3	100	92.659	Kryptolebias_marmoratus
ENSCSEG00000017954	nmd3	100	91.897	ENSLBEG00000022216	nmd3	100	91.897	Labrus_bergylta
ENSCSEG00000017954	nmd3	99	78.357	ENSLACG00000005731	NMD3	99	81.693	Latimeria_chalumnae
ENSCSEG00000017954	nmd3	100	86.931	ENSLOCG00000003561	nmd3	100	86.931	Lepisosteus_oculatus
ENSCSEG00000017954	nmd3	99	75.050	ENSLAFG00000007231	NMD3	100	75.050	Loxodonta_africana
ENSCSEG00000017954	nmd3	99	77.778	ENSMFAG00000040934	NMD3	100	77.778	Macaca_fascicularis
ENSCSEG00000017954	nmd3	99	77.137	ENSMMUG00000009564	NMD3	100	74.691	Macaca_mulatta
ENSCSEG00000017954	nmd3	99	77.778	ENSMNEG00000034626	NMD3	100	77.778	Macaca_nemestrina
ENSCSEG00000017954	nmd3	88	77.703	ENSMLEG00000002741	NMD3	100	77.703	Mandrillus_leucophaeus
ENSCSEG00000017954	nmd3	100	92.659	ENSMAMG00000012427	nmd3	100	92.659	Mastacembelus_armatus
ENSCSEG00000017954	nmd3	100	93.849	ENSMZEG00005016888	nmd3	100	93.849	Maylandia_zebra
ENSCSEG00000017954	nmd3	100	79.010	ENSMGAG00000010498	NMD3	100	79.010	Meleagris_gallopavo
ENSCSEG00000017954	nmd3	99	76.587	ENSMAUG00000000633	Nmd3	100	76.587	Mesocricetus_auratus
ENSCSEG00000017954	nmd3	99	77.381	ENSMICG00000049196	NMD3	100	77.381	Microcebus_murinus
ENSCSEG00000017954	nmd3	99	76.143	ENSMOCG00000005180	Nmd3	100	76.143	Microtus_ochrogaster
ENSCSEG00000017954	nmd3	100	92.673	ENSMMOG00000012765	nmd3	100	92.673	Mola_mola
ENSCSEG00000017954	nmd3	99	62.669	ENSMODG00000016296	NMD3	100	63.077	Monodelphis_domestica
ENSCSEG00000017954	nmd3	100	94.444	ENSMALG00000009256	nmd3	100	94.444	Monopterus_albus
ENSCSEG00000017954	nmd3	99	75.992	MGP_CAROLIEiJ_G0025069	Nmd3	100	75.992	Mus_caroli
ENSCSEG00000017954	nmd3	99	75.992	ENSMUSG00000027787	Nmd3	100	75.992	Mus_musculus
ENSCSEG00000017954	nmd3	99	75.992	MGP_PahariEiJ_G0026512	Nmd3	100	75.992	Mus_pahari
ENSCSEG00000017954	nmd3	99	76.190	MGP_SPRETEiJ_G0026011	Nmd3	100	76.190	Mus_spretus
ENSCSEG00000017954	nmd3	99	77.579	ENSMPUG00000002955	NMD3	99	77.579	Mustela_putorius_furo
ENSCSEG00000017954	nmd3	97	74.390	ENSMLUG00000000701	NMD3	97	74.390	Myotis_lucifugus
ENSCSEG00000017954	nmd3	99	77.137	ENSNGAG00000012307	Nmd3	99	77.137	Nannospalax_galili
ENSCSEG00000017954	nmd3	100	92.857	ENSNBRG00000003324	nmd3	100	92.857	Neolamprologus_brichardi
ENSCSEG00000017954	nmd3	99	77.778	ENSNLEG00000004655	NMD3	100	77.778	Nomascus_leucogenys
ENSCSEG00000017954	nmd3	73	70.175	ENSOPRG00000007690	-	73	70.175	Ochotona_princeps
ENSCSEG00000017954	nmd3	99	77.381	ENSODEG00000006270	NMD3	100	77.381	Octodon_degus
ENSCSEG00000017954	nmd3	100	93.651	ENSONIG00000003643	nmd3	100	93.651	Oreochromis_niloticus
ENSCSEG00000017954	nmd3	99	77.246	ENSOCUG00000017454	NMD3	100	77.246	Oryctolagus_cuniculus
ENSCSEG00000017954	nmd3	100	93.056	ENSORLG00000006279	nmd3	100	93.056	Oryzias_latipes
ENSCSEG00000017954	nmd3	100	93.056	ENSORLG00020003843	nmd3	100	93.056	Oryzias_latipes_hni
ENSCSEG00000017954	nmd3	100	92.659	ENSORLG00015006379	nmd3	100	92.659	Oryzias_latipes_hsok
ENSCSEG00000017954	nmd3	100	93.056	ENSOMEG00000012144	nmd3	100	93.056	Oryzias_melastigma
ENSCSEG00000017954	nmd3	99	77.381	ENSOGAG00000014910	NMD3	100	77.381	Otolemur_garnettii
ENSCSEG00000017954	nmd3	99	77.200	ENSOARG00000001883	NMD3	97	77.200	Ovis_aries
ENSCSEG00000017954	nmd3	99	77.555	ENSPPAG00000043829	NMD3	100	77.381	Pan_paniscus
ENSCSEG00000017954	nmd3	99	78.357	ENSPPRG00000000724	NMD3	97	78.357	Panthera_pardus
ENSCSEG00000017954	nmd3	99	77.778	ENSPTIG00000016761	NMD3	99	77.778	Panthera_tigris_altaica
ENSCSEG00000017954	nmd3	99	77.555	ENSPTRG00000015586	NMD3	100	77.381	Pan_troglodytes
ENSCSEG00000017954	nmd3	99	77.336	ENSPANG00000006665	NMD3	95	77.336	Papio_anubis
ENSCSEG00000017954	nmd3	100	89.087	ENSPKIG00000009928	nmd3	100	89.087	Paramormyrops_kingsleyae
ENSCSEG00000017954	nmd3	100	80.990	ENSPSIG00000007591	NMD3	100	80.990	Pelodiscus_sinensis
ENSCSEG00000017954	nmd3	100	87.698	ENSPMGG00000014015	nmd3	100	87.698	Periophthalmus_magnuspinnatus
ENSCSEG00000017954	nmd3	99	76.786	ENSPEMG00000021880	Nmd3	100	76.786	Peromyscus_maniculatus_bairdii
ENSCSEG00000017954	nmd3	99	80.357	ENSPCIG00000020869	NMD3	100	80.357	Phascolarctos_cinereus
ENSCSEG00000017954	nmd3	100	92.659	ENSPFOG00000012103	nmd3	100	92.659	Poecilia_formosa
ENSCSEG00000017954	nmd3	100	92.857	ENSPLAG00000008087	nmd3	100	92.857	Poecilia_latipinna
ENSCSEG00000017954	nmd3	100	92.659	ENSPMEG00000008506	nmd3	100	92.659	Poecilia_mexicana
ENSCSEG00000017954	nmd3	100	92.857	ENSPREG00000001848	nmd3	100	92.857	Poecilia_reticulata
ENSCSEG00000017954	nmd3	99	77.579	ENSPPYG00000014263	NMD3	100	77.579	Pongo_abelii
ENSCSEG00000017954	nmd3	91	63.913	ENSPCAG00000009851	NMD3	100	63.913	Procavia_capensis
ENSCSEG00000017954	nmd3	85	75.630	ENSPVAG00000003301	NMD3	85	75.630	Pteropus_vampyrus
ENSCSEG00000017954	nmd3	100	94.048	ENSPNYG00000006778	nmd3	100	94.048	Pundamilia_nyererei
ENSCSEG00000017954	nmd3	100	89.087	ENSPNAG00000009442	nmd3	100	89.087	Pygocentrus_nattereri
ENSCSEG00000017954	nmd3	99	76.190	ENSRNOG00000009310	Nmd3	100	76.190	Rattus_norvegicus
ENSCSEG00000017954	nmd3	99	73.810	ENSRBIG00000040379	NMD3	100	73.810	Rhinopithecus_bieti
ENSCSEG00000017954	nmd3	99	77.381	ENSRROG00000036181	NMD3	100	77.381	Rhinopithecus_roxellana
ENSCSEG00000017954	nmd3	97	42.043	YHR170W	NMD3	96	42.436	Saccharomyces_cerevisiae
ENSCSEG00000017954	nmd3	97	78.732	ENSSBOG00000024021	NMD3	99	77.666	Saimiri_boliviensis_boliviensis
ENSCSEG00000017954	nmd3	99	74.206	ENSSHAG00000016044	NMD3	100	74.206	Sarcophilus_harrisii
ENSCSEG00000017954	nmd3	100	89.484	ENSSFOG00015003609	nmd3	100	89.484	Scleropages_formosus
ENSCSEG00000017954	nmd3	100	92.063	ENSSMAG00000012887	nmd3	100	92.063	Scophthalmus_maximus
ENSCSEG00000017954	nmd3	100	95.833	ENSSDUG00000023721	nmd3	100	95.833	Seriola_dumerili
ENSCSEG00000017954	nmd3	100	95.238	ENSSLDG00000006565	nmd3	100	95.238	Seriola_lalandi_dorsalis
ENSCSEG00000017954	nmd3	97	77.505	ENSSARG00000010402	NMD3	99	77.505	Sorex_araneus
ENSCSEG00000017954	nmd3	99	80.160	ENSSPUG00000018791	NMD3	99	80.160	Sphenodon_punctatus
ENSCSEG00000017954	nmd3	100	93.056	ENSSPAG00000014328	nmd3	100	93.056	Stegastes_partitus
ENSCSEG00000017954	nmd3	99	77.108	ENSSSCG00000022952	NMD3	100	76.984	Sus_scrofa
ENSCSEG00000017954	nmd3	91	77.657	ENSTGUG00000015141	-	100	77.657	Taeniopygia_guttata
ENSCSEG00000017954	nmd3	99	79.563	ENSTGUG00000011140	-	100	79.563	Taeniopygia_guttata
ENSCSEG00000017954	nmd3	100	91.865	ENSTRUG00000005958	nmd3	100	91.865	Takifugu_rubripes
ENSCSEG00000017954	nmd3	99	57.341	ENSTBEG00000011783	-	100	57.341	Tupaia_belangeri
ENSCSEG00000017954	nmd3	99	73.016	ENSTTRG00000012938	NMD3	100	73.016	Tursiops_truncatus
ENSCSEG00000017954	nmd3	82	75.426	ENSUAMG00000009305	-	99	76.617	Ursus_americanus
ENSCSEG00000017954	nmd3	99	77.154	ENSUMAG00000011070	NMD3	99	77.108	Ursus_maritimus
ENSCSEG00000017954	nmd3	99	76.587	ENSVPAG00000008779	NMD3	100	76.587	Vicugna_pacos
ENSCSEG00000017954	nmd3	99	76.800	ENSVVUG00000023055	NMD3	99	76.800	Vulpes_vulpes
ENSCSEG00000017954	nmd3	100	81.188	ENSXETG00000027727	nmd3	100	81.188	Xenopus_tropicalis
ENSCSEG00000017954	nmd3	68	90.338	ENSXCOG00000012490	nmd3	84	90.338	Xiphophorus_couchianus
ENSCSEG00000017954	nmd3	100	92.857	ENSXMAG00000018406	nmd3	100	92.857	Xiphophorus_maculatus