EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000018097 (Gene tree)
Gene ID: -
Gene Symbol: polr1c
Alias: zgc:65973
Full Name: RNA polymerase I and III subunit C
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 4996 bases
Position: chr12:17115757-17120752
Accession: ZDB-GENE-040426-1495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000028317	RNA_pol_A_bac	PF01000.26	5.7e-30	1	1
ENSCSEP00000028317	RNA_pol_L	PF01193.24	3.8e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000028696	-	1041	-	ENSCSEP00000028317	346 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000018097's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000018097's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000018097	polr1c	100	72.046	ENSG00000171453	POLR1C	100	74.194	Homo_sapiens
ENSCSEG00000018097	polr1c	100	83.476	ENSAPOG00000024356	polr1c	100	84.046	Acanthochromis_polyacanthus
ENSCSEG00000018097	polr1c	99	72.464	ENSAMEG00000012205	POLR1C	99	72.464	Ailuropoda_melanoleuca
ENSCSEG00000018097	polr1c	94	74.320	ENSACIG00000016268	polr1c	91	75.227	Amphilophus_citrinellus
ENSCSEG00000018097	polr1c	100	82.621	ENSAOCG00000011687	polr1c	97	83.191	Amphiprion_ocellaris
ENSCSEG00000018097	polr1c	100	83.476	ENSAPEG00000002433	polr1c	100	84.046	Amphiprion_percula
ENSCSEG00000018097	polr1c	99	87.966	ENSATEG00000005985	polr1c	99	87.966	Anabas_testudineus
ENSCSEG00000018097	polr1c	86	72.667	ENSAPLG00000002908	POLR1C	100	72.667	Anas_platyrhynchos
ENSCSEG00000018097	polr1c	89	72.727	ENSACAG00000009764	POLR1C	88	72.727	Anolis_carolinensis
ENSCSEG00000018097	polr1c	100	72.334	ENSANAG00000025805	POLR1C	99	72.334	Aotus_nancymaae
ENSCSEG00000018097	polr1c	100	85.470	ENSACLG00000006573	polr1c	100	86.325	Astatotilapia_calliptera
ENSCSEG00000018097	polr1c	100	81.556	ENSAMXG00000012062	polr1c	99	81.556	Astyanax_mexicanus
ENSCSEG00000018097	polr1c	99	72.464	ENSBTAG00000018969	POLR1C	99	72.464	Bos_taurus
ENSCSEG00000018097	polr1c	55	31.313	WBGene00007971	rpb-3	67	31.313	Caenorhabditis_elegans
ENSCSEG00000018097	polr1c	96	44.318	WBGene00019275	rpac-40	94	44.318	Caenorhabditis_elegans
ENSCSEG00000018097	polr1c	99	71.014	ENSCJAG00000005594	POLR1C	99	71.014	Callithrix_jacchus
ENSCSEG00000018097	polr1c	99	72.174	ENSCAFG00000001872	POLR1C	99	72.174	Canis_familiaris
ENSCSEG00000018097	polr1c	99	72.174	ENSCAFG00020012018	POLR1C	99	72.174	Canis_lupus_dingo
ENSCSEG00000018097	polr1c	60	32.227	ENSCAFG00020007660	POLR2C	60	32.227	Canis_lupus_dingo
ENSCSEG00000018097	polr1c	99	71.676	ENSCHIG00000004352	POLR1C	99	71.676	Capra_hircus
ENSCSEG00000018097	polr1c	99	71.884	ENSTSYG00000011921	POLR1C	99	71.884	Carlito_syrichta
ENSCSEG00000018097	polr1c	86	73.579	ENSCAPG00000015364	POLR1C	88	73.579	Cavia_aperea
ENSCSEG00000018097	polr1c	100	73.199	ENSCPOG00000038098	POLR1C	100	73.199	Cavia_porcellus
ENSCSEG00000018097	polr1c	99	71.594	ENSCCAG00000020169	POLR1C	99	71.594	Cebus_capucinus
ENSCSEG00000018097	polr1c	100	72.046	ENSCATG00000044045	POLR1C	100	72.046	Cercocebus_atys
ENSCSEG00000018097	polr1c	100	73.775	ENSCLAG00000009266	POLR1C	100	73.775	Chinchilla_lanigera
ENSCSEG00000018097	polr1c	60	32.227	ENSCLAG00000013676	POLR2C	52	32.227	Chinchilla_lanigera
ENSCSEG00000018097	polr1c	100	71.182	ENSCSAG00000011913	POLR1C	100	71.182	Chlorocebus_sabaeus
ENSCSEG00000018097	polr1c	61	68.396	ENSCHOG00000006601	POLR1C	100	68.396	Choloepus_hoffmanni
ENSCSEG00000018097	polr1c	99	76.232	ENSCPBG00000025203	POLR1C	99	76.232	Chrysemys_picta_bellii
ENSCSEG00000018097	polr1c	98	54.252	ENSCING00000003563	-	98	54.252	Ciona_intestinalis
ENSCSEG00000018097	polr1c	58	30.374	ENSCSAVG00000002167	-	72	30.374	Ciona_savignyi
ENSCSEG00000018097	polr1c	100	72.046	ENSCANG00000043167	POLR1C	100	72.046	Colobus_angolensis_palliatus
ENSCSEG00000018097	polr1c	99	72.464	ENSCGRG00001017533	Polr1c	99	72.464	Cricetulus_griseus_chok1gshd
ENSCSEG00000018097	polr1c	86	73.913	ENSCGRG00000013225	Polr1c	100	73.913	Cricetulus_griseus_crigri
ENSCSEG00000018097	polr1c	61	86.321	ENSCVAG00000005684	polr1c	90	83.929	Cyprinodon_variegatus
ENSCSEG00000018097	polr1c	100	81.268	ENSDARG00000039400	polr1c	96	81.268	Danio_rerio
ENSCSEG00000018097	polr1c	100	72.911	ENSDNOG00000042693	POLR1C	100	72.911	Dasypus_novemcinctus
ENSCSEG00000018097	polr1c	99	72.464	ENSDORG00000000429	Polr1c	99	72.464	Dipodomys_ordii
ENSCSEG00000018097	polr1c	90	54.459	FBgn0031657	CG3756	93	54.459	Drosophila_melanogaster
ENSCSEG00000018097	polr1c	99	69.855	ENSETEG00000010807	POLR1C	99	69.855	Echinops_telfairi
ENSCSEG00000018097	polr1c	100	68.012	ENSEBUG00000013725	polr1c	99	68.012	Eptatretus_burgeri
ENSCSEG00000018097	polr1c	99	71.304	ENSEASG00005003338	POLR1C	99	71.304	Equus_asinus_asinus
ENSCSEG00000018097	polr1c	99	71.304	ENSECAG00000023516	POLR1C	98	71.304	Equus_caballus
ENSCSEG00000018097	polr1c	99	73.043	ENSEEUG00000005471	POLR1C	99	73.043	Erinaceus_europaeus
ENSCSEG00000018097	polr1c	100	80.403	ENSELUG00000013027	polr1c	100	80.403	Esox_lucius
ENSCSEG00000018097	polr1c	99	72.174	ENSFCAG00000009735	POLR1C	99	72.174	Felis_catus
ENSCSEG00000018097	polr1c	93	72.446	ENSFALG00000012111	POLR1C	100	72.446	Ficedula_albicollis
ENSCSEG00000018097	polr1c	99	72.174	ENSFDAG00000008428	POLR1C	99	72.174	Fukomys_damarensis
ENSCSEG00000018097	polr1c	100	72.543	ENSFHEG00000000262	polr1c	100	72.832	Fundulus_heteroclitus
ENSCSEG00000018097	polr1c	54	75.130	ENSFHEG00000013867	-	94	75.130	Fundulus_heteroclitus
ENSCSEG00000018097	polr1c	93	79.876	ENSGMOG00000013878	polr1c	100	79.876	Gadus_morhua
ENSCSEG00000018097	polr1c	99	72.464	ENSGALG00000010349	POLR1C	99	72.464	Gallus_gallus
ENSCSEG00000018097	polr1c	100	84.330	ENSGAFG00000010153	polr1c	100	84.330	Gambusia_affinis
ENSCSEG00000018097	polr1c	100	82.621	ENSGACG00000002453	polr1c	100	83.761	Gasterosteus_aculeatus
ENSCSEG00000018097	polr1c	99	75.072	ENSGAGG00000010640	POLR1C	99	75.072	Gopherus_agassizii
ENSCSEG00000018097	polr1c	100	72.046	ENSGGOG00000010903	POLR1C	100	72.046	Gorilla_gorilla
ENSCSEG00000018097	polr1c	100	78.963	ENSHBUG00000017816	polr1c	100	78.963	Haplochromis_burtoni
ENSCSEG00000018097	polr1c	99	71.884	ENSHGLG00000019441	POLR1C	100	71.923	Heterocephalus_glaber_female
ENSCSEG00000018097	polr1c	99	72.174	ENSHGLG00100005970	POLR1C	100	71.923	Heterocephalus_glaber_male
ENSCSEG00000018097	polr1c	99	80.516	ENSHCOG00000002179	polr1c	99	80.516	Hippocampus_comes
ENSCSEG00000018097	polr1c	100	81.609	ENSIPUG00000024464	polr1c	100	81.609	Ictalurus_punctatus
ENSCSEG00000018097	polr1c	99	71.884	ENSSTOG00000010631	POLR1C	99	71.884	Ictidomys_tridecemlineatus
ENSCSEG00000018097	polr1c	60	32.227	ENSSTOG00000015150	-	50	32.227	Ictidomys_tridecemlineatus
ENSCSEG00000018097	polr1c	99	71.304	ENSJJAG00000023110	Polr1c	99	71.304	Jaculus_jaculus
ENSCSEG00000018097	polr1c	100	84.900	ENSKMAG00000014305	polr1c	97	84.900	Kryptolebias_marmoratus
ENSCSEG00000018097	polr1c	100	83.761	ENSLBEG00000014925	polr1c	100	84.615	Labrus_bergylta
ENSCSEG00000018097	polr1c	95	58.735	ENSLACG00000012567	POLR1C	98	58.735	Latimeria_chalumnae
ENSCSEG00000018097	polr1c	100	79.251	ENSLOCG00000016710	polr1c	96	79.251	Lepisosteus_oculatus
ENSCSEG00000018097	polr1c	60	32.227	ENSLAFG00000027230	POLR2C	74	32.227	Loxodonta_africana
ENSCSEG00000018097	polr1c	86	73.754	ENSLAFG00000026248	POLR1C	100	73.754	Loxodonta_africana
ENSCSEG00000018097	polr1c	100	71.758	ENSMFAG00000046295	POLR1C	100	71.758	Macaca_fascicularis
ENSCSEG00000018097	polr1c	100	71.758	ENSMMUG00000015192	POLR1C	100	71.758	Macaca_mulatta
ENSCSEG00000018097	polr1c	100	71.758	ENSMNEG00000028073	POLR1C	100	71.758	Macaca_nemestrina
ENSCSEG00000018097	polr1c	100	71.758	ENSMLEG00000034818	POLR1C	100	71.758	Mandrillus_leucophaeus
ENSCSEG00000018097	polr1c	100	86.895	ENSMAMG00000008700	polr1c	100	86.895	Mastacembelus_armatus
ENSCSEG00000018097	polr1c	100	85.185	ENSMZEG00005018545	polr1c	100	86.040	Maylandia_zebra
ENSCSEG00000018097	polr1c	84	70.103	ENSMGAG00000011020	POLR1C	100	70.103	Meleagris_gallopavo
ENSCSEG00000018097	polr1c	99	72.464	ENSMAUG00000014329	Polr1c	99	72.464	Mesocricetus_auratus
ENSCSEG00000018097	polr1c	99	70.145	ENSMICG00000005027	POLR1C	99	70.684	Microcebus_murinus
ENSCSEG00000018097	polr1c	59	32.536	ENSMOCG00000013652	Polr2c	73	32.536	Microtus_ochrogaster
ENSCSEG00000018097	polr1c	99	73.043	ENSMOCG00000017549	Polr1c	99	73.043	Microtus_ochrogaster
ENSCSEG00000018097	polr1c	100	71.098	ENSMMOG00000005380	polr1c	100	71.387	Mola_mola
ENSCSEG00000018097	polr1c	84	73.540	ENSMODG00000018964	POLR1C	100	73.540	Monodelphis_domestica
ENSCSEG00000018097	polr1c	100	75.504	ENSMALG00000011711	polr1c	100	75.793	Monopterus_albus
ENSCSEG00000018097	polr1c	99	64.058	MGP_CAROLIEiJ_G0021662	Polr1c	100	72.692	Mus_caroli
ENSCSEG00000018097	polr1c	99	72.174	ENSMUSG00000067148	Polr1c	100	72.308	Mus_musculus
ENSCSEG00000018097	polr1c	99	73.333	MGP_PahariEiJ_G0020654	Polr1c	100	73.462	Mus_pahari
ENSCSEG00000018097	polr1c	99	72.174	MGP_SPRETEiJ_G0022574	Polr1c	100	72.308	Mus_spretus
ENSCSEG00000018097	polr1c	99	72.464	ENSMPUG00000012916	POLR1C	91	72.464	Mustela_putorius_furo
ENSCSEG00000018097	polr1c	99	72.174	ENSMLUG00000017751	POLR1C	99	72.174	Myotis_lucifugus
ENSCSEG00000018097	polr1c	60	30.698	ENSMLUG00000029495	-	73	30.698	Myotis_lucifugus
ENSCSEG00000018097	polr1c	99	71.594	ENSNGAG00000023487	Polr1c	100	73.196	Nannospalax_galili
ENSCSEG00000018097	polr1c	100	85.470	ENSNBRG00000018742	polr1c	100	86.325	Neolamprologus_brichardi
ENSCSEG00000018097	polr1c	100	72.046	ENSNLEG00000004035	POLR1C	100	72.046	Nomascus_leucogenys
ENSCSEG00000018097	polr1c	53	32.821	ENSNLEG00000003034	POLR2C	74	32.821	Nomascus_leucogenys
ENSCSEG00000018097	polr1c	100	60.807	ENSMEUG00000006778	POLR1C	100	60.807	Notamacropus_eugenii
ENSCSEG00000018097	polr1c	77	72.285	ENSOPRG00000000145	POLR1C	99	72.285	Ochotona_princeps
ENSCSEG00000018097	polr1c	100	73.199	ENSODEG00000015831	-	100	73.199	Octodon_degus
ENSCSEG00000018097	polr1c	62	70.833	ENSODEG00000017109	-	99	70.833	Octodon_degus
ENSCSEG00000018097	polr1c	100	86.325	ENSONIG00000013133	polr1c	98	87.179	Oreochromis_niloticus
ENSCSEG00000018097	polr1c	99	69.855	ENSOANG00000003043	POLR1C	99	69.855	Ornithorhynchus_anatinus
ENSCSEG00000018097	polr1c	99	71.304	ENSOCUG00000005504	POLR1C	99	71.304	Oryctolagus_cuniculus
ENSCSEG00000018097	polr1c	99	80.747	ENSORLG00000019743	polr1c	99	80.747	Oryzias_latipes
ENSCSEG00000018097	polr1c	99	81.034	ENSORLG00020006489	POLR1C	99	81.034	Oryzias_latipes_hni
ENSCSEG00000018097	polr1c	77	64.855	ENSORLG00020005555	polr1c	81	64.855	Oryzias_latipes_hni
ENSCSEG00000018097	polr1c	99	80.747	ENSORLG00015013322	polr1c	99	80.747	Oryzias_latipes_hsok
ENSCSEG00000018097	polr1c	98	82.319	ENSOMEG00000016527	polr1c	98	82.319	Oryzias_melastigma
ENSCSEG00000018097	polr1c	99	71.182	ENSOGAG00000016318	POLR1C	99	71.182	Otolemur_garnettii
ENSCSEG00000018097	polr1c	99	72.174	ENSOARG00000007503	POLR1C	99	72.174	Ovis_aries
ENSCSEG00000018097	polr1c	100	72.046	ENSPPAG00000043678	POLR1C	100	72.046	Pan_paniscus
ENSCSEG00000018097	polr1c	99	72.174	ENSPPRG00000009760	POLR1C	99	72.174	Panthera_pardus
ENSCSEG00000018097	polr1c	99	72.174	ENSPTIG00000014813	POLR1C	99	72.174	Panthera_tigris_altaica
ENSCSEG00000018097	polr1c	100	72.046	ENSPTRG00000018202	POLR1C	100	72.046	Pan_troglodytes
ENSCSEG00000018097	polr1c	100	72.046	ENSPANG00000009025	POLR1C	99	72.046	Papio_anubis
ENSCSEG00000018097	polr1c	100	80.115	ENSPKIG00000009858	polr1c	100	80.115	Paramormyrops_kingsleyae
ENSCSEG00000018097	polr1c	99	75.072	ENSPSIG00000012580	POLR1C	94	75.072	Pelodiscus_sinensis
ENSCSEG00000018097	polr1c	100	71.470	ENSPMGG00000012121	polr1c	100	71.758	Periophthalmus_magnuspinnatus
ENSCSEG00000018097	polr1c	99	72.464	ENSPEMG00000006970	Polr1c	99	72.464	Peromyscus_maniculatus_bairdii
ENSCSEG00000018097	polr1c	55	33.166	ENSPMAG00000004827	polr2c	81	33.166	Petromyzon_marinus
ENSCSEG00000018097	polr1c	99	69.828	ENSPMAG00000005560	polr1c	99	69.828	Petromyzon_marinus
ENSCSEG00000018097	polr1c	100	72.622	ENSPCIG00000028137	POLR1C	98	72.622	Phascolarctos_cinereus
ENSCSEG00000018097	polr1c	100	84.330	ENSPFOG00000014357	polr1c	98	84.330	Poecilia_formosa
ENSCSEG00000018097	polr1c	100	84.330	ENSPFOG00000014342	POLR1C	100	84.330	Poecilia_formosa
ENSCSEG00000018097	polr1c	61	85.849	ENSPLAG00000004111	polr1c	92	84.545	Poecilia_latipinna
ENSCSEG00000018097	polr1c	100	84.330	ENSPMEG00000008420	polr1c	100	84.330	Poecilia_mexicana
ENSCSEG00000018097	polr1c	100	84.330	ENSPMEG00000011877	-	100	84.330	Poecilia_mexicana
ENSCSEG00000018097	polr1c	100	85.260	ENSPREG00000007985	polr1c	100	85.260	Poecilia_reticulata
ENSCSEG00000018097	polr1c	100	71.758	ENSPPYG00000016645	POLR1C	100	71.758	Pongo_abelii
ENSCSEG00000018097	polr1c	99	71.014	ENSPCOG00000024628	POLR1C	99	71.014	Propithecus_coquereli
ENSCSEG00000018097	polr1c	100	67.147	ENSPVAG00000005689	POLR1C	100	67.147	Pteropus_vampyrus
ENSCSEG00000018097	polr1c	100	85.836	ENSPNYG00000003620	polr1c	100	86.610	Pundamilia_nyererei
ENSCSEG00000018097	polr1c	100	82.421	ENSPNAG00000008443	polr1c	100	82.421	Pygocentrus_nattereri
ENSCSEG00000018097	polr1c	99	73.043	ENSRNOG00000019079	Polr1c	100	72.308	Rattus_norvegicus
ENSCSEG00000018097	polr1c	100	72.046	ENSRBIG00000007155	POLR1C	100	72.046	Rhinopithecus_bieti
ENSCSEG00000018097	polr1c	100	72.046	ENSRROG00000000257	POLR1C	100	72.046	Rhinopithecus_roxellana
ENSCSEG00000018097	polr1c	90	49.211	YPR110C	RPC40	94	49.211	Saccharomyces_cerevisiae
ENSCSEG00000018097	polr1c	99	71.594	ENSSBOG00000025735	POLR1C	99	71.895	Saimiri_boliviensis_boliviensis
ENSCSEG00000018097	polr1c	100	66.282	ENSSHAG00000014456	POLR1C	100	66.282	Sarcophilus_harrisii
ENSCSEG00000018097	polr1c	100	82.421	ENSSFOG00015019860	polr1c	100	82.421	Scleropages_formosus
ENSCSEG00000018097	polr1c	100	88.439	ENSSMAG00000018865	polr1c	100	88.439	Scophthalmus_maximus
ENSCSEG00000018097	polr1c	100	87.464	ENSSDUG00000015745	polr1c	91	88.319	Seriola_dumerili
ENSCSEG00000018097	polr1c	100	86.895	ENSSLDG00000018285	polr1c	91	87.749	Seriola_lalandi_dorsalis
ENSCSEG00000018097	polr1c	99	71.930	ENSSPUG00000011822	POLR1C	99	71.930	Sphenodon_punctatus
ENSCSEG00000018097	polr1c	100	84.046	ENSSPAG00000022369	polr1c	100	84.615	Stegastes_partitus
ENSCSEG00000018097	polr1c	99	71.594	ENSSSCG00000028007	POLR1C	98	71.594	Sus_scrofa
ENSCSEG00000018097	polr1c	96	73.193	ENSTGUG00000009159	POLR1C	99	73.193	Taeniopygia_guttata
ENSCSEG00000018097	polr1c	100	82.621	ENSTRUG00000006264	polr1c	100	82.621	Takifugu_rubripes
ENSCSEG00000018097	polr1c	51	72.472	ENSTBEG00000002254	POLR1C	100	72.472	Tupaia_belangeri
ENSCSEG00000018097	polr1c	76	70.342	ENSTTRG00000006344	POLR1C	76	70.342	Tursiops_truncatus
ENSCSEG00000018097	polr1c	99	72.464	ENSUAMG00000025602	POLR1C	99	72.464	Ursus_americanus
ENSCSEG00000018097	polr1c	99	72.464	ENSUMAG00000005938	POLR1C	99	72.464	Ursus_maritimus
ENSCSEG00000018097	polr1c	99	69.855	ENSVVUG00000028922	POLR1C	99	69.855	Vulpes_vulpes
ENSCSEG00000018097	polr1c	60	31.754	ENSXETG00000013784	polr2c	73	31.754	Xenopus_tropicalis
ENSCSEG00000018097	polr1c	98	68.713	ENSXETG00000010882	polr1c	99	68.713	Xenopus_tropicalis
ENSCSEG00000018097	polr1c	100	84.483	ENSXCOG00000014185	polr1c	100	84.483	Xiphophorus_couchianus
ENSCSEG00000018097	polr1c	100	84.046	ENSXMAG00000015076	polr1c	100	84.046	Xiphophorus_maculatus