EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000018164 (Gene tree)
Gene ID: 103383117
Gene Symbol: rbm17
Alias: zgc:55840
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 4833 bases
Position: chr8:29710776-29715608
Accession: 103383117
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000028457	RRM_1	PF00076.22	3.2e-05	1	1
ENSCSEP00000028448	RRM_1	PF00076.22	3.4e-05	1	1
ENSCSEP00000028457	G-patch	PF01585.23	4.1e-13	1	1
ENSCSEP00000028448	G-patch	PF01585.23	4.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000028830	-	1257	XM_008316144	ENSCSEP00000028448	418 (aa)	XP_008314366	-
ENSCSET00000028839	-	1215	-	ENSCSEP00000028457	404 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000018164's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000018164's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000018164	rbm17	100	80.049	ENSG00000134453	RBM17	100	79.310	Homo_sapiens
ENSCSEG00000018164	rbm17	99	88.702	ENSAPOG00000007101	rbm17	99	88.702	Acanthochromis_polyacanthus
ENSCSEG00000018164	rbm17	100	80.296	ENSAMEG00000002107	RBM17	100	79.557	Ailuropoda_melanoleuca
ENSCSEG00000018164	rbm17	100	88.670	ENSACIG00000006251	rbm17	100	88.670	Amphilophus_citrinellus
ENSCSEG00000018164	rbm17	100	88.571	ENSAOCG00000014892	rbm17	100	88.571	Amphiprion_ocellaris
ENSCSEG00000018164	rbm17	100	88.571	ENSAPEG00000022779	rbm17	100	88.571	Amphiprion_percula
ENSCSEG00000018164	rbm17	100	86.493	ENSATEG00000004406	rbm17	100	86.493	Anabas_testudineus
ENSCSEG00000018164	rbm17	100	79.115	ENSAPLG00000004190	RBM17	100	79.115	Anas_platyrhynchos
ENSCSEG00000018164	rbm17	90	76.425	ENSACAG00000005418	RBM17	99	75.648	Anolis_carolinensis
ENSCSEG00000018164	rbm17	100	80.296	ENSANAG00000030127	RBM17	100	85.484	Aotus_nancymaae
ENSCSEG00000018164	rbm17	100	71.429	ENSANAG00000019330	-	97	85.593	Aotus_nancymaae
ENSCSEG00000018164	rbm17	100	88.148	ENSACLG00000003928	rbm17	100	88.148	Astatotilapia_calliptera
ENSCSEG00000018164	rbm17	100	80.425	ENSAMXG00000005853	rbm17	100	82.311	Astyanax_mexicanus
ENSCSEG00000018164	rbm17	100	80.049	ENSBTAG00000021951	RBM17	100	79.310	Bos_taurus
ENSCSEG00000018164	rbm17	100	78.818	ENSBTAG00000011094	-	100	78.079	Bos_taurus
ENSCSEG00000018164	rbm17	97	30.340	WBGene00010233	F58B3.7	91	30.521	Caenorhabditis_elegans
ENSCSEG00000018164	rbm17	100	80.296	ENSCJAG00000020573	RBM17	100	79.557	Callithrix_jacchus
ENSCSEG00000018164	rbm17	100	80.296	ENSCAFG00000005206	RBM17	100	79.557	Canis_familiaris
ENSCSEG00000018164	rbm17	100	78.519	ENSCAFG00020005420	RBM17	100	79.259	Canis_lupus_dingo
ENSCSEG00000018164	rbm17	100	80.049	ENSCHIG00000023204	-	100	79.310	Capra_hircus
ENSCSEG00000018164	rbm17	100	77.833	ENSCHIG00000019921	-	100	77.833	Capra_hircus
ENSCSEG00000018164	rbm17	100	79.335	ENSTSYG00000001165	RBM17	97	89.565	Carlito_syrichta
ENSCSEG00000018164	rbm17	96	61.975	ENSCAPG00000006275	RBM17	100	68.817	Cavia_aperea
ENSCSEG00000018164	rbm17	100	77.751	ENSCPOG00000005679	RBM17	100	78.502	Cavia_porcellus
ENSCSEG00000018164	rbm17	100	80.296	ENSCCAG00000018655	RBM17	100	85.484	Cebus_capucinus
ENSCSEG00000018164	rbm17	100	80.049	ENSCATG00000041566	RBM17	100	85.484	Cercocebus_atys
ENSCSEG00000018164	rbm17	100	79.572	ENSCLAG00000012195	RBM17	99	79.268	Chinchilla_lanigera
ENSCSEG00000018164	rbm17	100	80.049	ENSCSAG00000013564	RBM17	100	79.310	Chlorocebus_sabaeus
ENSCSEG00000018164	rbm17	93	61.538	ENSCHOG00000005131	RBM17	100	61.067	Choloepus_hoffmanni
ENSCSEG00000018164	rbm17	100	79.853	ENSCPBG00000019836	RBM17	100	80.098	Chrysemys_picta_bellii
ENSCSEG00000018164	rbm17	100	43.925	ENSCSAVG00000008782	-	100	41.315	Ciona_savignyi
ENSCSEG00000018164	rbm17	97	73.028	ENSCANG00000023715	-	99	72.265	Colobus_angolensis_palliatus
ENSCSEG00000018164	rbm17	100	79.803	ENSCANG00000030987	RBM17	100	85.484	Colobus_angolensis_palliatus
ENSCSEG00000018164	rbm17	100	64.356	ENSCGRG00001009256	-	100	61.139	Cricetulus_griseus_chok1gshd
ENSCSEG00000018164	rbm17	100	79.810	ENSCGRG00001013842	Rbm17	100	79.512	Cricetulus_griseus_chok1gshd
ENSCSEG00000018164	rbm17	100	79.810	ENSCGRG00000006907	Rbm17	100	79.512	Cricetulus_griseus_crigri
ENSCSEG00000018164	rbm17	100	84.653	ENSCVAG00000002476	rbm17	100	84.406	Cyprinodon_variegatus
ENSCSEG00000018164	rbm17	100	79.717	ENSDARG00000031346	rbm17	100	79.953	Danio_rerio
ENSCSEG00000018164	rbm17	100	80.542	ENSDNOG00000035920	RBM17	100	79.803	Dasypus_novemcinctus
ENSCSEG00000018164	rbm17	99	37.556	FBgn0086683	Spf45	99	35.841	Drosophila_melanogaster
ENSCSEG00000018164	rbm17	86	83.099	ENSETEG00000006642	RBM17	82	83.099	Echinops_telfairi
ENSCSEG00000018164	rbm17	79	59.565	ENSEBUG00000010253	rbm17	93	69.048	Eptatretus_burgeri
ENSCSEG00000018164	rbm17	100	77.073	ENSEASG00005019205	-	100	78.537	Equus_asinus_asinus
ENSCSEG00000018164	rbm17	92	78.133	ENSEASG00005009236	-	100	78.133	Equus_asinus_asinus
ENSCSEG00000018164	rbm17	100	69.877	ENSECAG00000008939	RBM17	100	70.617	Equus_caballus
ENSCSEG00000018164	rbm17	100	71.429	ENSECAG00000001379	-	100	71.429	Equus_caballus
ENSCSEG00000018164	rbm17	86	62.751	ENSEEUG00000013077	RBM17	100	62.751	Erinaceus_europaeus
ENSCSEG00000018164	rbm17	100	82.599	ENSELUG00000006440	rbm17	100	82.599	Esox_lucius
ENSCSEG00000018164	rbm17	100	80.296	ENSFCAG00000031988	RBM17	100	79.557	Felis_catus
ENSCSEG00000018164	rbm17	100	79.557	ENSFALG00000001790	RBM17	100	78.818	Ficedula_albicollis
ENSCSEG00000018164	rbm17	100	79.572	ENSFDAG00000007470	RBM17	100	79.268	Fukomys_damarensis
ENSCSEG00000018164	rbm17	100	86.730	ENSFHEG00000001266	rbm17	100	85.926	Fundulus_heteroclitus
ENSCSEG00000018164	rbm17	99	78.520	ENSGMOG00000008438	rbm17	100	78.520	Gadus_morhua
ENSCSEG00000018164	rbm17	100	79.557	ENSGALG00000006332	RBM17	100	78.818	Gallus_gallus
ENSCSEG00000018164	rbm17	100	86.667	ENSGAFG00000019879	rbm17	100	86.667	Gambusia_affinis
ENSCSEG00000018164	rbm17	99	85.891	ENSGACG00000019174	rbm17	99	85.612	Gasterosteus_aculeatus
ENSCSEG00000018164	rbm17	100	79.853	ENSGAGG00000019906	RBM17	100	80.098	Gopherus_agassizii
ENSCSEG00000018164	rbm17	100	88.333	ENSHBUG00000016624	rbm17	100	88.333	Haplochromis_burtoni
ENSCSEG00000018164	rbm17	100	79.572	ENSHGLG00000011580	RBM17	100	79.268	Heterocephalus_glaber_female
ENSCSEG00000018164	rbm17	100	79.572	ENSHGLG00100010460	RBM17	100	79.268	Heterocephalus_glaber_male
ENSCSEG00000018164	rbm17	100	65.441	ENSHGLG00100010556	-	62	69.512	Heterocephalus_glaber_male
ENSCSEG00000018164	rbm17	99	85.612	ENSHCOG00000010865	rbm17	100	85.612	Hippocampus_comes
ENSCSEG00000018164	rbm17	100	79.577	ENSIPUG00000007699	Rbm17	100	80.986	Ictalurus_punctatus
ENSCSEG00000018164	rbm17	100	79.810	ENSSTOG00000013591	RBM17	100	79.512	Ictidomys_tridecemlineatus
ENSCSEG00000018164	rbm17	100	59.145	ENSJJAG00000000993	-	100	58.621	Jaculus_jaculus
ENSCSEG00000018164	rbm17	100	79.810	ENSJJAG00000022886	Rbm17	100	79.512	Jaculus_jaculus
ENSCSEG00000018164	rbm17	100	85.545	ENSKMAG00000021400	rbm17	100	85.545	Kryptolebias_marmoratus
ENSCSEG00000018164	rbm17	100	88.152	ENSLBEG00000000881	rbm17	100	88.152	Labrus_bergylta
ENSCSEG00000018164	rbm17	99	67.056	ENSLACG00000017297	RBM17	99	63.700	Latimeria_chalumnae
ENSCSEG00000018164	rbm17	100	79.147	ENSLOCG00000015659	rbm17	100	79.902	Lepisosteus_oculatus
ENSCSEG00000018164	rbm17	100	79.335	ENSLAFG00000011629	RBM17	100	78.883	Loxodonta_africana
ENSCSEG00000018164	rbm17	100	80.049	ENSMFAG00000035521	RBM17	100	85.484	Macaca_fascicularis
ENSCSEG00000018164	rbm17	100	80.049	ENSMMUG00000015152	RBM17	100	85.484	Macaca_mulatta
ENSCSEG00000018164	rbm17	100	80.049	ENSMNEG00000017264	RBM17	100	85.484	Macaca_nemestrina
ENSCSEG00000018164	rbm17	100	80.049	ENSMLEG00000029340	RBM17	100	85.484	Mandrillus_leucophaeus
ENSCSEG00000018164	rbm17	100	86.730	ENSMAMG00000000387	rbm17	100	86.730	Mastacembelus_armatus
ENSCSEG00000018164	rbm17	100	88.333	ENSMZEG00005015179	rbm17	100	88.333	Maylandia_zebra
ENSCSEG00000018164	rbm17	100	77.966	ENSMGAG00000003981	RBM17	100	77.966	Meleagris_gallopavo
ENSCSEG00000018164	rbm17	100	79.810	ENSMAUG00000019247	Rbm17	100	79.512	Mesocricetus_auratus
ENSCSEG00000018164	rbm17	100	79.810	ENSMICG00000003976	-	100	79.512	Microcebus_murinus
ENSCSEG00000018164	rbm17	100	74.882	ENSMICG00000041489	-	100	74.171	Microcebus_murinus
ENSCSEG00000018164	rbm17	100	79.810	ENSMOCG00000011847	Rbm17	100	79.512	Microtus_ochrogaster
ENSCSEG00000018164	rbm17	93	63.588	ENSMOCG00000014517	-	99	63.325	Microtus_ochrogaster
ENSCSEG00000018164	rbm17	100	82.195	ENSMMOG00000010264	rbm17	100	82.195	Mola_mola
ENSCSEG00000018164	rbm17	100	80.296	ENSMODG00000016648	RBM17	100	79.557	Monodelphis_domestica
ENSCSEG00000018164	rbm17	100	85.816	ENSMALG00000010597	rbm17	100	87.234	Monopterus_albus
ENSCSEG00000018164	rbm17	100	79.810	MGP_CAROLIEiJ_G0023173	Rbm17	100	79.512	Mus_caroli
ENSCSEG00000018164	rbm17	100	79.810	ENSMUSG00000037197	Rbm17	100	79.512	Mus_musculus
ENSCSEG00000018164	rbm17	100	80.285	MGP_PahariEiJ_G0019233	Rbm17	100	80.000	Mus_pahari
ENSCSEG00000018164	rbm17	100	79.810	MGP_SPRETEiJ_G0024091	Rbm17	100	79.512	Mus_spretus
ENSCSEG00000018164	rbm17	86	78.223	ENSMPUG00000016359	RBM17	96	78.223	Mustela_putorius_furo
ENSCSEG00000018164	rbm17	100	76.413	ENSMLUG00000025709	-	100	75.616	Myotis_lucifugus
ENSCSEG00000018164	rbm17	100	78.102	ENSMLUG00000002302	-	100	78.102	Myotis_lucifugus
ENSCSEG00000018164	rbm17	100	56.897	ENSNGAG00000000663	-	95	77.528	Nannospalax_galili
ENSCSEG00000018164	rbm17	100	79.810	ENSNGAG00000000741	Rbm17	100	79.512	Nannospalax_galili
ENSCSEG00000018164	rbm17	100	85.185	ENSNBRG00000018148	rbm17	100	85.185	Neolamprologus_brichardi
ENSCSEG00000018164	rbm17	100	80.049	ENSNLEG00000033350	RBM17	100	85.484	Nomascus_leucogenys
ENSCSEG00000018164	rbm17	100	75.123	ENSMEUG00000011347	RBM17	100	75.123	Notamacropus_eugenii
ENSCSEG00000018164	rbm17	100	70.123	ENSOPRG00000002993	RBM17	100	70.123	Ochotona_princeps
ENSCSEG00000018164	rbm17	100	79.384	ENSODEG00000004393	RBM17	100	79.075	Octodon_degus
ENSCSEG00000018164	rbm17	97	61.558	ENSODEG00000007286	-	99	61.558	Octodon_degus
ENSCSEG00000018164	rbm17	100	88.571	ENSONIG00000011838	rbm17	100	88.571	Oreochromis_niloticus
ENSCSEG00000018164	rbm17	100	79.572	ENSOANG00000015455	RBM17	100	79.902	Ornithorhynchus_anatinus
ENSCSEG00000018164	rbm17	100	86.730	ENSORLG00000028798	rbm17	100	86.730	Oryzias_latipes
ENSCSEG00000018164	rbm17	100	86.730	ENSORLG00020004593	rbm17	100	85.926	Oryzias_latipes_hni
ENSCSEG00000018164	rbm17	100	86.967	ENSORLG00015000033	rbm17	100	86.914	Oryzias_latipes_hsok
ENSCSEG00000018164	rbm17	100	86.493	ENSOMEG00000012060	rbm17	100	91.824	Oryzias_melastigma
ENSCSEG00000018164	rbm17	100	80.048	ENSOGAG00000015687	RBM17	100	79.756	Otolemur_garnettii
ENSCSEG00000018164	rbm17	100	80.049	ENSOARG00000012975	RBM17	100	79.310	Ovis_aries
ENSCSEG00000018164	rbm17	100	80.049	ENSPPAG00000032347	RBM17	100	85.484	Pan_paniscus
ENSCSEG00000018164	rbm17	100	80.296	ENSPPRG00000010706	RBM17	100	79.557	Panthera_pardus
ENSCSEG00000018164	rbm17	100	80.296	ENSPTIG00000007596	RBM17	100	79.557	Panthera_tigris_altaica
ENSCSEG00000018164	rbm17	100	80.049	ENSPTRG00000002265	RBM17	100	85.484	Pan_troglodytes
ENSCSEG00000018164	rbm17	100	80.049	ENSPANG00000023425	RBM17	100	85.484	Papio_anubis
ENSCSEG00000018164	rbm17	100	78.089	ENSPKIG00000005048	-	100	78.322	Paramormyrops_kingsleyae
ENSCSEG00000018164	rbm17	100	79.767	ENSPKIG00000025526	rbm17	100	79.350	Paramormyrops_kingsleyae
ENSCSEG00000018164	rbm17	100	79.024	ENSPSIG00000012332	RBM17	100	79.024	Pelodiscus_sinensis
ENSCSEG00000018164	rbm17	100	84.444	ENSPMGG00000007980	rbm17	100	84.444	Periophthalmus_magnuspinnatus
ENSCSEG00000018164	rbm17	100	79.810	ENSPEMG00000014320	Rbm17	100	79.512	Peromyscus_maniculatus_bairdii
ENSCSEG00000018164	rbm17	100	79.902	ENSPCIG00000019260	-	100	79.167	Phascolarctos_cinereus
ENSCSEG00000018164	rbm17	100	87.204	ENSPFOG00000013271	rbm17	100	87.204	Poecilia_formosa
ENSCSEG00000018164	rbm17	100	87.204	ENSPLAG00000004455	rbm17	100	87.204	Poecilia_latipinna
ENSCSEG00000018164	rbm17	100	87.407	ENSPMEG00000014864	rbm17	100	87.407	Poecilia_mexicana
ENSCSEG00000018164	rbm17	100	87.204	ENSPREG00000015589	rbm17	100	87.204	Poecilia_reticulata
ENSCSEG00000018164	rbm17	100	80.049	ENSPPYG00000002067	RBM17	100	79.310	Pongo_abelii
ENSCSEG00000018164	rbm17	81	57.492	ENSPPYG00000019042	-	100	56.140	Pongo_abelii
ENSCSEG00000018164	rbm17	99	59.901	ENSPPYG00000019881	-	100	58.950	Pongo_abelii
ENSCSEG00000018164	rbm17	100	72.660	ENSPCAG00000016879	RBM17	100	72.660	Procavia_capensis
ENSCSEG00000018164	rbm17	100	80.542	ENSPCOG00000027881	RBM17	100	79.803	Propithecus_coquereli
ENSCSEG00000018164	rbm17	100	71.852	ENSPVAG00000015499	RBM17	100	70.343	Pteropus_vampyrus
ENSCSEG00000018164	rbm17	100	80.000	ENSPNYG00000015274	rbm17	100	75.802	Pundamilia_nyererei
ENSCSEG00000018164	rbm17	100	81.604	ENSPNAG00000030046	rbm17	100	83.491	Pygocentrus_nattereri
ENSCSEG00000018164	rbm17	100	79.810	ENSRNOG00000018767	Rbm17	100	79.512	Rattus_norvegicus
ENSCSEG00000018164	rbm17	100	80.049	ENSRBIG00000043727	RBM17	100	85.484	Rhinopithecus_bieti
ENSCSEG00000018164	rbm17	100	80.049	ENSRROG00000044142	RBM17	100	85.484	Rhinopithecus_roxellana
ENSCSEG00000018164	rbm17	100	71.007	ENSSBOG00000023653	-	100	67.076	Saimiri_boliviensis_boliviensis
ENSCSEG00000018164	rbm17	100	80.049	ENSSBOG00000031661	-	100	83.871	Saimiri_boliviensis_boliviensis
ENSCSEG00000018164	rbm17	100	80.296	ENSSHAG00000012480	-	100	79.557	Sarcophilus_harrisii
ENSCSEG00000018164	rbm17	100	78.973	ENSSFOG00015009892	rbm17	100	79.951	Scleropages_formosus
ENSCSEG00000018164	rbm17	100	84.065	ENSSMAG00000012368	rbm17	100	84.065	Scophthalmus_maximus
ENSCSEG00000018164	rbm17	100	87.136	ENSSDUG00000015015	rbm17	100	87.407	Seriola_dumerili
ENSCSEG00000018164	rbm17	100	87.136	ENSSLDG00000014486	rbm17	100	87.407	Seriola_lalandi_dorsalis
ENSCSEG00000018164	rbm17	99	80.788	ENSSPUG00000001036	RBM17	99	80.788	Sphenodon_punctatus
ENSCSEG00000018164	rbm17	100	88.395	ENSSPAG00000002338	rbm17	100	88.395	Stegastes_partitus
ENSCSEG00000018164	rbm17	100	79.803	ENSSSCG00000011134	RBM17	100	79.064	Sus_scrofa
ENSCSEG00000018164	rbm17	100	78.780	ENSTGUG00000002013	RBM17	100	78.780	Taeniopygia_guttata
ENSCSEG00000018164	rbm17	100	86.386	ENSTRUG00000010698	rbm17	100	86.386	Takifugu_rubripes
ENSCSEG00000018164	rbm17	100	85.995	ENSTNIG00000006892	rbm17	100	85.995	Tetraodon_nigroviridis
ENSCSEG00000018164	rbm17	100	64.444	ENSTBEG00000014686	RBM17	100	65.764	Tupaia_belangeri
ENSCSEG00000018164	rbm17	90	78.904	ENSTTRG00000001344	RBM17	100	78.082	Tursiops_truncatus
ENSCSEG00000018164	rbm17	100	79.259	ENSUAMG00000009499	RBM17	100	80.000	Ursus_americanus
ENSCSEG00000018164	rbm17	100	80.296	ENSUMAG00000012237	RBM17	100	79.557	Ursus_maritimus
ENSCSEG00000018164	rbm17	100	68.171	ENSVPAG00000005497	RBM17	82	86.957	Vicugna_pacos
ENSCSEG00000018164	rbm17	100	78.519	ENSVVUG00000006780	RBM17	100	79.259	Vulpes_vulpes
ENSCSEG00000018164	rbm17	99	76.108	ENSXETG00000018123	rbm17	100	75.862	Xenopus_tropicalis
ENSCSEG00000018164	rbm17	100	86.603	ENSXMAG00000008674	rbm17	100	86.730	Xiphophorus_maculatus