EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000018268 (Gene tree)
Gene ID: 103391314
Gene Symbol: polr1d
Alias: im:7162148|zgc:136449
Full Name: DNA-directed RNA polymerases I and III subunit RPAC2-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 1849 bases
Position: chr15:18423850-18425698
Accession: 103391314
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000028538	RNA_pol_L_2	PF13656.6	3.3e-28	1	1
ENSCSEP00000028542	RNA_pol_L_2	PF13656.6	5.6e-28	1	1
ENSCSEP00000028538	RNA_pol_L	PF01193.24	1.5e-10	1	1
ENSCSEP00000028542	RNA_pol_L	PF01193.24	2.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000028922	-	354	XM_008327535	ENSCSEP00000028538	117 (aa)	XP_008325757	UPI0004981341
ENSCSET00000028926	-	441	-	ENSCSEP00000028542	146 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000018268's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03020	RNA polymerase	KEGG
csem04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000018268's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000018268	polr1d	83	30.928	ENSCSEG00000020352	polr2j	63	33.784

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000018268	polr1d	96	66.071	ENSG00000186184	POLR1D	90	70.192	Homo_sapiens
ENSCSEG00000018268	polr1d	87	86.275	ENSAPOG00000021882	polr1d	96	86.275	Acanthochromis_polyacanthus
ENSCSEG00000018268	polr1d	96	66.964	ENSAMEG00000019095	POLR1D	83	71.154	Ailuropoda_melanoleuca
ENSCSEG00000018268	polr1d	100	83.898	ENSACIG00000013328	polr1d	93	86.916	Amphilophus_citrinellus
ENSCSEG00000018268	polr1d	94	85.455	ENSAOCG00000018500	polr1d	93	85.849	Amphiprion_ocellaris
ENSCSEG00000018268	polr1d	94	86.364	ENSAPEG00000009489	polr1d	93	86.792	Amphiprion_percula
ENSCSEG00000018268	polr1d	100	86.325	ENSATEG00000019322	polr1d	93	89.623	Anabas_testudineus
ENSCSEG00000018268	polr1d	94	63.393	ENSACAG00000015753	POLR1D	93	64.815	Anolis_carolinensis
ENSCSEG00000018268	polr1d	91	69.159	ENSANAG00000024486	POLR1D	77	71.845	Aotus_nancymaae
ENSCSEG00000018268	polr1d	100	85.470	ENSACLG00000023805	polr1d	93	88.679	Astatotilapia_calliptera
ENSCSEG00000018268	polr1d	94	75.455	ENSAMXG00000036118	polr1d	91	77.143	Astyanax_mexicanus
ENSCSEG00000018268	polr1d	91	68.224	ENSBTAG00000008642	POLR1D	78	69.231	Bos_taurus
ENSCSEG00000018268	polr1d	91	68.224	ENSBTAG00000033252	-	78	69.231	Bos_taurus
ENSCSEG00000018268	polr1d	68	36.250	WBGene00010230	rpac-19	56	36.250	Caenorhabditis_elegans
ENSCSEG00000018268	polr1d	91	70.093	ENSCJAG00000044669	POLR1D	77	71.845	Callithrix_jacchus
ENSCSEG00000018268	polr1d	91	70.093	ENSCAFG00000006755	POLR1D	78	71.154	Canis_familiaris
ENSCSEG00000018268	polr1d	91	69.159	ENSCHIG00000021910	POLR1D	78	70.192	Capra_hircus
ENSCSEG00000018268	polr1d	91	60.185	ENSTSYG00000034852	-	87	60.952	Carlito_syrichta
ENSCSEG00000018268	polr1d	95	66.667	ENSTSYG00000026817	-	77	70.874	Carlito_syrichta
ENSCSEG00000018268	polr1d	60	60.000	ENSCAPG00000006058	-	69	58.824	Cavia_aperea
ENSCSEG00000018268	polr1d	60	60.000	ENSCPOG00000030450	-	64	61.905	Cavia_porcellus
ENSCSEG00000018268	polr1d	91	70.093	ENSCCAG00000021349	-	77	72.816	Cebus_capucinus
ENSCSEG00000018268	polr1d	97	50.442	ENSCCAG00000020191	-	83	50.442	Cebus_capucinus
ENSCSEG00000018268	polr1d	91	57.944	ENSCATG00000022900	-	76	59.223	Cercocebus_atys
ENSCSEG00000018268	polr1d	96	66.071	ENSCATG00000030710	-	78	70.192	Cercocebus_atys
ENSCSEG00000018268	polr1d	91	69.159	ENSCLAG00000017623	POLR1D	84	69.231	Chinchilla_lanigera
ENSCSEG00000018268	polr1d	86	79.208	ENSCPBG00000004719	POLR1D	100	79.208	Chrysemys_picta_bellii
ENSCSEG00000018268	polr1d	91	69.159	ENSCANG00000028632	-	78	70.192	Colobus_angolensis_palliatus
ENSCSEG00000018268	polr1d	91	67.290	ENSCANG00000037694	-	78	68.269	Colobus_angolensis_palliatus
ENSCSEG00000018268	polr1d	97	65.487	ENSCGRG00001021251	Polr1d	85	65.487	Cricetulus_griseus_chok1gshd
ENSCSEG00000018268	polr1d	97	65.487	ENSCGRG00000011639	Polr1d	85	65.487	Cricetulus_griseus_crigri
ENSCSEG00000018268	polr1d	95	81.081	ENSCVAG00000018527	polr1d	93	83.019	Cyprinodon_variegatus
ENSCSEG00000018268	polr1d	92	75.000	ENSDARG00000037570	polr1d	93	75.000	Danio_rerio
ENSCSEG00000018268	polr1d	96	65.179	ENSDNOG00000043676	-	78	69.231	Dasypus_novemcinctus
ENSCSEG00000018268	polr1d	96	64.286	ENSDNOG00000046247	-	78	68.269	Dasypus_novemcinctus
ENSCSEG00000018268	polr1d	91	68.224	ENSDORG00000029155	Polr1d	78	69.231	Dipodomys_ordii
ENSCSEG00000018268	polr1d	73	50.588	FBgn0086447	l(2)37Cg	80	50.588	Drosophila_melanogaster
ENSCSEG00000018268	polr1d	96	68.750	ENSETEG00000012797	POLR1D	84	71.154	Echinops_telfairi
ENSCSEG00000018268	polr1d	74	72.093	ENSEBUG00000011748	polr1d	64	68.478	Eptatretus_burgeri
ENSCSEG00000018268	polr1d	95	68.468	ENSEASG00005022487	POLR1D	81	71.154	Equus_asinus_asinus
ENSCSEG00000018268	polr1d	91	70.755	ENSEEUG00000013144	POLR1D	84	71.154	Erinaceus_europaeus
ENSCSEG00000018268	polr1d	96	78.571	ENSELUG00000005105	rpac2	92	80.952	Esox_lucius
ENSCSEG00000018268	polr1d	96	66.964	ENSFCAG00000030162	POLR1D	78	71.154	Felis_catus
ENSCSEG00000018268	polr1d	85	71.717	ENSFALG00000011463	POLR1D	92	74.194	Ficedula_albicollis
ENSCSEG00000018268	polr1d	91	68.224	ENSFDAG00000004463	POLR1D	78	68.269	Fukomys_damarensis
ENSCSEG00000018268	polr1d	100	79.487	ENSFHEG00000015410	polr1d	92	83.019	Fundulus_heteroclitus
ENSCSEG00000018268	polr1d	57	61.194	ENSGALG00000007470	POLR1D	51	73.077	Gallus_gallus
ENSCSEG00000018268	polr1d	100	82.051	ENSGAFG00000001693	polr1d	93	84.906	Gambusia_affinis
ENSCSEG00000018268	polr1d	93	85.321	ENSGACG00000018585	polr1d	90	86.792	Gasterosteus_aculeatus
ENSCSEG00000018268	polr1d	96	75.893	ENSGAGG00000008503	POLR1D	93	78.302	Gopherus_agassizii
ENSCSEG00000018268	polr1d	91	69.159	ENSGGOG00000004235	POLR1D	78	70.192	Gorilla_gorilla
ENSCSEG00000018268	polr1d	100	85.470	ENSHBUG00000002111	polr1d	93	88.679	Haplochromis_burtoni
ENSCSEG00000018268	polr1d	91	67.290	ENSHGLG00000003202	POLR1D	74	71.429	Heterocephalus_glaber_female
ENSCSEG00000018268	polr1d	91	67.290	ENSHGLG00100009393	POLR1D	74	71.429	Heterocephalus_glaber_male
ENSCSEG00000018268	polr1d	100	76.923	ENSHCOG00000003258	polr1d	93	80.189	Hippocampus_comes
ENSCSEG00000018268	polr1d	92	79.630	ENSIPUG00000014810	polr1d	91	79.048	Ictalurus_punctatus
ENSCSEG00000018268	polr1d	91	69.159	ENSSTOG00000013877	POLR1D	78	70.192	Ictidomys_tridecemlineatus
ENSCSEG00000018268	polr1d	96	63.393	ENSJJAG00000022671	-	87	68.269	Jaculus_jaculus
ENSCSEG00000018268	polr1d	96	52.679	ENSJJAG00000021667	-	61	55.769	Jaculus_jaculus
ENSCSEG00000018268	polr1d	100	79.487	ENSKMAG00000015256	polr1d	93	83.019	Kryptolebias_marmoratus
ENSCSEG00000018268	polr1d	100	85.470	ENSLBEG00000015919	polr1d	93	90.566	Labrus_bergylta
ENSCSEG00000018268	polr1d	91	67.290	ENSLACG00000006810	POLR1D	83	70.000	Latimeria_chalumnae
ENSCSEG00000018268	polr1d	60	80.000	ENSLOCG00000014976	polr1d	95	80.000	Lepisosteus_oculatus
ENSCSEG00000018268	polr1d	91	69.159	ENSLAFG00000032290	POLR1D	78	70.192	Loxodonta_africana
ENSCSEG00000018268	polr1d	91	69.159	ENSMFAG00000045264	POLR1D	81	70.192	Macaca_fascicularis
ENSCSEG00000018268	polr1d	96	66.071	ENSMMUG00000020386	POLR1D	90	70.192	Macaca_mulatta
ENSCSEG00000018268	polr1d	69	65.432	ENSMMUG00000041570	-	70	66.667	Macaca_mulatta
ENSCSEG00000018268	polr1d	91	69.159	ENSMNEG00000008630	-	78	70.192	Macaca_nemestrina
ENSCSEG00000018268	polr1d	85	55.556	ENSMNEG00000038120	-	70	59.341	Macaca_nemestrina
ENSCSEG00000018268	polr1d	91	69.159	ENSMLEG00000041048	-	78	70.192	Mandrillus_leucophaeus
ENSCSEG00000018268	polr1d	91	58.879	ENSMLEG00000032251	-	77	59.615	Mandrillus_leucophaeus
ENSCSEG00000018268	polr1d	87	90.196	ENSMAMG00000014834	polr1d	93	92.000	Mastacembelus_armatus
ENSCSEG00000018268	polr1d	87	87.255	ENSMZEG00005006638	polr1d	90	87.255	Maylandia_zebra
ENSCSEG00000018268	polr1d	79	75.000	ENSMGAG00000005322	POLR1D	84	75.000	Meleagris_gallopavo
ENSCSEG00000018268	polr1d	97	65.487	ENSMAUG00000001946	Polr1d	85	65.487	Mesocricetus_auratus
ENSCSEG00000018268	polr1d	91	68.224	ENSMICG00000016883	-	78	69.231	Microcebus_murinus
ENSCSEG00000018268	polr1d	96	50.893	ENSMICG00000007349	-	73	56.122	Microcebus_murinus
ENSCSEG00000018268	polr1d	97	64.602	ENSMOCG00000021288	Polr1d	85	64.602	Microtus_ochrogaster
ENSCSEG00000018268	polr1d	100	83.761	ENSMMOG00000009605	polr1d	100	83.761	Mola_mola
ENSCSEG00000018268	polr1d	94	71.818	ENSMODG00000023881	POLR1D	92	74.286	Monodelphis_domestica
ENSCSEG00000018268	polr1d	100	82.906	ENSMALG00000010652	polr1d	100	82.906	Monopterus_albus
ENSCSEG00000018268	polr1d	97	62.832	MGP_CAROLIEiJ_G0028034	Polr1d	85	62.832	Mus_caroli
ENSCSEG00000018268	polr1d	97	62.832	ENSMUSG00000029642	Polr1d	85	62.832	Mus_musculus
ENSCSEG00000018268	polr1d	97	62.832	MGP_PahariEiJ_G0024600	Polr1d	85	62.832	Mus_pahari
ENSCSEG00000018268	polr1d	97	63.717	MGP_SPRETEiJ_G0029032	Polr1d	85	63.717	Mus_spretus
ENSCSEG00000018268	polr1d	91	64.486	ENSMLUG00000004118	-	78	65.385	Myotis_lucifugus
ENSCSEG00000018268	polr1d	91	70.093	ENSMLUG00000027169	-	78	71.154	Myotis_lucifugus
ENSCSEG00000018268	polr1d	96	66.071	ENSNGAG00000006014	Polr1d	89	70.874	Nannospalax_galili
ENSCSEG00000018268	polr1d	100	85.470	ENSNBRG00000020327	polr1d	93	88.679	Neolamprologus_brichardi
ENSCSEG00000018268	polr1d	91	69.159	ENSNLEG00000000358	POLR1D	78	70.192	Nomascus_leucogenys
ENSCSEG00000018268	polr1d	91	69.811	ENSODEG00000005294	-	78	69.231	Octodon_degus
ENSCSEG00000018268	polr1d	91	58.491	ENSODEG00000014801	-	84	56.140	Octodon_degus
ENSCSEG00000018268	polr1d	92	76.852	ENSOANG00000008708	-	98	77.358	Ornithorhynchus_anatinus
ENSCSEG00000018268	polr1d	96	66.071	ENSOCUG00000015706	POLR1D	64	70.192	Oryctolagus_cuniculus
ENSCSEG00000018268	polr1d	100	75.214	ENSORLG00000010257	polr1d	93	79.245	Oryzias_latipes
ENSCSEG00000018268	polr1d	100	75.214	ENSORLG00020000533	polr1d	72	79.245	Oryzias_latipes_hni
ENSCSEG00000018268	polr1d	100	74.359	ENSORLG00015013267	polr1d	70	78.302	Oryzias_latipes_hsok
ENSCSEG00000018268	polr1d	94	77.273	ENSOMEG00000014912	polr1d	71	78.302	Oryzias_melastigma
ENSCSEG00000018268	polr1d	96	66.964	ENSOGAG00000014601	POLR1D	78	71.154	Otolemur_garnettii
ENSCSEG00000018268	polr1d	96	66.071	ENSOARG00000017005	POLR1D	80	70.192	Ovis_aries
ENSCSEG00000018268	polr1d	96	66.071	ENSPPAG00000028138	POLR1D	78	70.192	Pan_paniscus
ENSCSEG00000018268	polr1d	96	66.964	ENSPPRG00000003381	POLR1D	78	71.154	Panthera_pardus
ENSCSEG00000018268	polr1d	96	66.964	ENSPTIG00000018137	POLR1D	78	71.154	Panthera_tigris_altaica
ENSCSEG00000018268	polr1d	91	69.159	ENSPTRG00000005734	POLR1D	78	70.192	Pan_troglodytes
ENSCSEG00000018268	polr1d	91	69.159	ENSPANG00000020259	-	78	70.192	Papio_anubis
ENSCSEG00000018268	polr1d	91	57.944	ENSPANG00000035051	-	77	58.654	Papio_anubis
ENSCSEG00000018268	polr1d	95	70.270	ENSPKIG00000021891	polr1d	93	59.829	Paramormyrops_kingsleyae
ENSCSEG00000018268	polr1d	94	71.818	ENSPSIG00000011822	POLR1D	82	72.642	Pelodiscus_sinensis
ENSCSEG00000018268	polr1d	95	72.072	ENSPMGG00000012998	POLR1D	77	72.642	Periophthalmus_magnuspinnatus
ENSCSEG00000018268	polr1d	95	80.180	ENSPMGG00000010359	polr1d	92	81.132	Periophthalmus_magnuspinnatus
ENSCSEG00000018268	polr1d	97	65.487	ENSPEMG00000006336	-	87	65.487	Peromyscus_maniculatus_bairdii
ENSCSEG00000018268	polr1d	94	56.364	ENSPMAG00000004228	polr1d	87	59.813	Petromyzon_marinus
ENSCSEG00000018268	polr1d	94	70.909	ENSPCIG00000001673	POLR1D	92	74.286	Phascolarctos_cinereus
ENSCSEG00000018268	polr1d	100	82.906	ENSPFOG00000023343	polr1d	93	85.849	Poecilia_formosa
ENSCSEG00000018268	polr1d	100	82.906	ENSPLAG00000009675	polr1d	93	85.849	Poecilia_latipinna
ENSCSEG00000018268	polr1d	100	82.906	ENSPMEG00000004628	polr1d	93	85.849	Poecilia_mexicana
ENSCSEG00000018268	polr1d	100	82.906	ENSPREG00000022032	polr1d	93	85.849	Poecilia_reticulata
ENSCSEG00000018268	polr1d	91	67.290	ENSPCOG00000028175	POLR1D	78	68.269	Propithecus_coquereli
ENSCSEG00000018268	polr1d	100	85.470	ENSPNYG00000000107	polr1d	93	88.679	Pundamilia_nyererei
ENSCSEG00000018268	polr1d	89	71.154	ENSPNAG00000001512	polr1d	88	70.476	Pygocentrus_nattereri
ENSCSEG00000018268	polr1d	91	65.421	ENSRBIG00000000336	-	78	66.346	Rhinopithecus_bieti
ENSCSEG00000018268	polr1d	91	69.159	ENSRBIG00000036378	-	78	70.192	Rhinopithecus_bieti
ENSCSEG00000018268	polr1d	91	69.159	ENSRROG00000042232	-	78	70.192	Rhinopithecus_roxellana
ENSCSEG00000018268	polr1d	91	66.355	ENSRROG00000026751	-	78	67.308	Rhinopithecus_roxellana
ENSCSEG00000018268	polr1d	83	44.330	YNL113W	RPC19	70	44.000	Saccharomyces_cerevisiae
ENSCSEG00000018268	polr1d	91	69.159	ENSSBOG00000028482	-	77	71.845	Saimiri_boliviensis_boliviensis
ENSCSEG00000018268	polr1d	85	68.687	ENSSBOG00000030146	-	73	68.687	Saimiri_boliviensis_boliviensis
ENSCSEG00000018268	polr1d	97	68.421	ENSSHAG00000001190	POLR1D	81	73.333	Sarcophilus_harrisii
ENSCSEG00000018268	polr1d	92	73.148	ENSSFOG00015011375	polr1d	91	75.962	Scleropages_formosus
ENSCSEG00000018268	polr1d	100	88.034	ENSSMAG00000011861	polr1d	93	91.509	Scophthalmus_maximus
ENSCSEG00000018268	polr1d	100	88.034	ENSSDUG00000011930	polr1d	93	91.509	Seriola_dumerili
ENSCSEG00000018268	polr1d	96	83.186	ENSSLDG00000023871	polr1d	85	92.000	Seriola_lalandi_dorsalis
ENSCSEG00000018268	polr1d	91	70.093	ENSSARG00000007840	POLR1D	78	71.154	Sorex_araneus
ENSCSEG00000018268	polr1d	87	72.549	ENSSPUG00000005786	POLR1D	93	71.560	Sphenodon_punctatus
ENSCSEG00000018268	polr1d	100	85.470	ENSSPAG00000011764	polr1d	93	89.623	Stegastes_partitus
ENSCSEG00000018268	polr1d	91	67.290	ENSSSCG00000009310	POLR1D	78	69.231	Sus_scrofa
ENSCSEG00000018268	polr1d	82	73.958	ENSTGUG00000005450	POLR1D	97	75.269	Taeniopygia_guttata
ENSCSEG00000018268	polr1d	100	73.504	ENSTRUG00000019741	polr1d	93	76.415	Takifugu_rubripes
ENSCSEG00000018268	polr1d	96	66.071	ENSTBEG00000007006	POLR1D	83	71.845	Tupaia_belangeri
ENSCSEG00000018268	polr1d	91	70.093	ENSUAMG00000011413	POLR1D	78	71.154	Ursus_americanus
ENSCSEG00000018268	polr1d	96	66.964	ENSUMAG00000016968	POLR1D	81	71.154	Ursus_maritimus
ENSCSEG00000018268	polr1d	91	70.093	ENSVVUG00000009216	POLR1D	78	71.154	Vulpes_vulpes
ENSCSEG00000018268	polr1d	86	86.139	ENSXCOG00000011731	polr1d	78	86.139	Xiphophorus_couchianus
ENSCSEG00000018268	polr1d	86	85.149	ENSXMAG00000017538	polr1d	78	85.149	Xiphophorus_maculatus