EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000018290 (Gene tree)
Gene ID: 103378513
Gene Symbol: zgc:114130
Alias: fb92b09|wu:fb92b09
Full Name: mRNA decay activator protein ZFP36L1-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 5095 bases
Position: chr4:18232376-18237470
Accession: 103378513
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000028570	zf-CCCH	PF00642.24	1.7e-19	1	2
ENSCSEP00000028570	zf-CCCH	PF00642.24	1.7e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000028954	-	3602	XM_008309766	ENSCSEP00000028570	434 (aa)	XP_008307988	UPI0004979356

Gene Model

Click here to download ENSCSEG00000018290's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem04218	Cellular senescence	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000018290's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000018290	zgc:114130	54	42.688	ENSCSEG00000014426	sb:cb81	65	38.547
ENSCSEG00000018290	zgc:114130	87	34.367	ENSCSEG00000018283	zgc:162730	60	40.928

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000018290	zgc:114130	100	69.283	ENSAPOG00000014912	zgc:114130	100	70.179	Acanthochromis_polyacanthus
ENSCSEG00000018290	zgc:114130	97	34.968	ENSACIG00000009027	sb:cb81	62	39.527	Amphilophus_citrinellus
ENSCSEG00000018290	zgc:114130	83	65.489	ENSACIG00000017364	zgc:114130	99	65.761	Amphilophus_citrinellus
ENSCSEG00000018290	zgc:114130	100	67.489	ENSAOCG00000022227	zgc:114130	100	69.507	Amphiprion_ocellaris
ENSCSEG00000018290	zgc:114130	100	68.161	ENSAPEG00000015497	zgc:114130	100	69.283	Amphiprion_percula
ENSCSEG00000018290	zgc:114130	63	38.384	ENSATEG00000003462	sb:cb81	64	39.145	Anabas_testudineus
ENSCSEG00000018290	zgc:114130	100	66.962	ENSATEG00000008781	zgc:114130	100	68.736	Anabas_testudineus
ENSCSEG00000018290	zgc:114130	64	39.344	ENSACLG00000013759	sb:cb81	62	39.130	Astatotilapia_calliptera
ENSCSEG00000018290	zgc:114130	100	61.798	ENSACLG00000022113	zgc:114130	100	64.062	Astatotilapia_calliptera
ENSCSEG00000018290	zgc:114130	68	41.000	ENSAMXG00000034874	sb:cb81	70	38.689	Astyanax_mexicanus
ENSCSEG00000018290	zgc:114130	99	43.722	ENSAMXG00000038581	zgc:114130	95	47.191	Astyanax_mexicanus
ENSCSEG00000018290	zgc:114130	98	59.318	ENSCVAG00000018574	zgc:114130	100	58.636	Cyprinodon_variegatus
ENSCSEG00000018290	zgc:114130	60	39.789	ENSCVAG00000009207	sb:cb81	70	40.439	Cyprinodon_variegatus
ENSCSEG00000018290	zgc:114130	99	46.861	ENSDARG00000040725	zgc:114130	96	45.351	Danio_rerio
ENSCSEG00000018290	zgc:114130	97	36.534	ENSDARG00000040503	sb:cb81	98	35.172	Danio_rerio
ENSCSEG00000018290	zgc:114130	97	35.828	ENSELUG00000013045	sb:cb81	98	32.823	Esox_lucius
ENSCSEG00000018290	zgc:114130	99	50.455	ENSELUG00000013151	zgc:114130	98	49.548	Esox_lucius
ENSCSEG00000018290	zgc:114130	98	57.658	ENSFHEG00000000656	zgc:114130	100	58.333	Fundulus_heteroclitus
ENSCSEG00000018290	zgc:114130	60	40.559	ENSFHEG00000022187	sb:cb81	98	35.371	Fundulus_heteroclitus
ENSCSEG00000018290	zgc:114130	78	53.161	ENSGMOG00000017223	zgc:114130	99	53.009	Gadus_morhua
ENSCSEG00000018290	zgc:114130	80	57.983	ENSGAFG00000009949	zgc:114130	93	57.143	Gambusia_affinis
ENSCSEG00000018290	zgc:114130	76	34.254	ENSGAFG00000009953	zgc:162730	55	39.271	Gambusia_affinis
ENSCSEG00000018290	zgc:114130	78	65.896	ENSGACG00000008344	zgc:114130	100	66.763	Gasterosteus_aculeatus
ENSCSEG00000018290	zgc:114130	100	62.472	ENSHBUG00000015051	zgc:114130	100	64.732	Haplochromis_burtoni
ENSCSEG00000018290	zgc:114130	64	39.203	ENSHBUG00000002383	sb:cb81	63	39.404	Haplochromis_burtoni
ENSCSEG00000018290	zgc:114130	100	57.534	ENSHCOG00000015800	zgc:114130	98	57.991	Hippocampus_comes
ENSCSEG00000018290	zgc:114130	98	42.956	ENSIPUG00000018256	zgc:114130	79	43.056	Ictalurus_punctatus
ENSCSEG00000018290	zgc:114130	100	62.222	ENSKMAG00000019287	zgc:114130	100	62.444	Kryptolebias_marmoratus
ENSCSEG00000018290	zgc:114130	60	38.267	ENSKMAG00000019277	zgc:162730	65	36.644	Kryptolebias_marmoratus
ENSCSEG00000018290	zgc:114130	99	67.048	ENSLBEG00000018387	zgc:114130	99	66.590	Labrus_bergylta
ENSCSEG00000018290	zgc:114130	95	33.333	ENSLACG00000015980	-	51	38.683	Latimeria_chalumnae
ENSCSEG00000018290	zgc:114130	97	36.806	ENSLACG00000015732	sb:cb81	98	36.085	Latimeria_chalumnae
ENSCSEG00000018290	zgc:114130	52	41.176	ENSLOCG00000014597	zgc:162730	54	42.017	Lepisosteus_oculatus
ENSCSEG00000018290	zgc:114130	97	38.208	ENSLOCG00000014587	sb:cb81	98	38.018	Lepisosteus_oculatus
ENSCSEG00000018290	zgc:114130	100	68.018	ENSMAMG00000007511	zgc:114130	98	67.342	Mastacembelus_armatus
ENSCSEG00000018290	zgc:114130	100	62.022	ENSMZEG00005014410	zgc:114130	100	64.286	Maylandia_zebra
ENSCSEG00000018290	zgc:114130	64	39.542	ENSMZEG00005024684	sb:cb81	62	38.667	Maylandia_zebra
ENSCSEG00000018290	zgc:114130	64	39.672	ENSMZEG00005016001	-	62	38.796	Maylandia_zebra
ENSCSEG00000018290	zgc:114130	83	64.499	ENSMMOG00000011504	zgc:114130	97	64.770	Mola_mola
ENSCSEG00000018290	zgc:114130	58	32.558	ENSMMOG00000011506	zgc:162730	54	40.580	Mola_mola
ENSCSEG00000018290	zgc:114130	73	40.729	ENSMPUG00000007282	ZFP36L1	53	48.404	Mustela_putorius_furo
ENSCSEG00000018290	zgc:114130	81	58.889	ENSNBRG00000013703	zgc:114130	98	60.000	Neolamprologus_brichardi
ENSCSEG00000018290	zgc:114130	78	62.609	ENSONIG00000005004	zgc:114130	99	62.899	Oreochromis_niloticus
ENSCSEG00000018290	zgc:114130	60	37.818	ENSORLG00000024026	sb:cb81	51	38.182	Oryzias_latipes
ENSCSEG00000018290	zgc:114130	60	39.544	ENSORLG00020021084	sb:cb81	59	39.194	Oryzias_latipes_hni
ENSCSEG00000018290	zgc:114130	60	39.163	ENSORLG00015010105	sb:cb81	59	38.828	Oryzias_latipes_hsok
ENSCSEG00000018290	zgc:114130	60	38.603	ENSOMEG00000020565	sb:cb81	60	37.868	Oryzias_melastigma
ENSCSEG00000018290	zgc:114130	73	39.938	ENSPTIG00000019155	ZFP36L1	50	48.352	Panthera_tigris_altaica
ENSCSEG00000018290	zgc:114130	64	36.552	ENSPFOG00000003665	zgc:162730	64	39.574	Poecilia_formosa
ENSCSEG00000018290	zgc:114130	98	60.135	ENSPFOG00000003653	zgc:114130	100	59.417	Poecilia_formosa
ENSCSEG00000018290	zgc:114130	98	60.407	ENSPLAG00000000947	zgc:114130	100	59.685	Poecilia_latipinna
ENSCSEG00000018290	zgc:114130	98	59.685	ENSPMEG00000015335	zgc:114130	100	59.417	Poecilia_mexicana
ENSCSEG00000018290	zgc:114130	98	60.314	ENSPREG00000021254	zgc:114130	100	59.375	Poecilia_reticulata
ENSCSEG00000018290	zgc:114130	100	61.348	ENSPNYG00000015546	zgc:114130	100	63.616	Pundamilia_nyererei
ENSCSEG00000018290	zgc:114130	64	40.273	ENSPNYG00000007502	sb:cb81	61	39.519	Pundamilia_nyererei
ENSCSEG00000018290	zgc:114130	97	36.967	ENSPNAG00000030063	sb:cb81	72	39.016	Pygocentrus_nattereri
ENSCSEG00000018290	zgc:114130	99	42.605	ENSPNAG00000023029	zgc:114130	97	42.572	Pygocentrus_nattereri
ENSCSEG00000018290	zgc:114130	63	36.823	ENSSFOG00015003179	sb:cb81	57	36.727	Scleropages_formosus
ENSCSEG00000018290	zgc:114130	98	68.879	ENSSMAG00000018621	zgc:114130	95	68.192	Scophthalmus_maximus
ENSCSEG00000018290	zgc:114130	98	71.330	ENSSDUG00000002237	zgc:114130	100	70.642	Seriola_dumerili
ENSCSEG00000018290	zgc:114130	98	70.413	ENSSLDG00000008496	zgc:114130	100	69.495	Seriola_lalandi_dorsalis
ENSCSEG00000018290	zgc:114130	100	69.507	ENSSPAG00000006856	zgc:114130	100	70.179	Stegastes_partitus
ENSCSEG00000018290	zgc:114130	100	62.754	ENSTRUG00000022473	zgc:114130	100	62.754	Takifugu_rubripes
ENSCSEG00000018290	zgc:114130	84	52.473	ENSXCOG00000012792	zgc:114130	96	51.680	Xiphophorus_couchianus
ENSCSEG00000018290	zgc:114130	98	59.184	ENSXMAG00000026836	zgc:114130	100	59.368	Xiphophorus_maculatus