EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000018342 (Gene tree)
Gene ID: 103377276
Gene Symbol: rreb1a
Alias: id:ibd1338|si:ch211-266d19.3
Full Name: ras responsive element binding protein 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 43313 bases
Position: chr3:11301066-11344378
Accession: 103377276
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000028675	zf-C2H2	PF00096.26	2.9e-34	1	5
ENSCSEP00000028675	zf-C2H2	PF00096.26	2.9e-34	2	5
ENSCSEP00000028675	zf-C2H2	PF00096.26	2.9e-34	3	5
ENSCSEP00000028675	zf-C2H2	PF00096.26	2.9e-34	4	5
ENSCSEP00000028675	zf-C2H2	PF00096.26	2.9e-34	5	5
ENSCSEP00000028657	zf-C2H2	PF00096.26	3.3e-34	1	5
ENSCSEP00000028657	zf-C2H2	PF00096.26	3.3e-34	2	5
ENSCSEP00000028657	zf-C2H2	PF00096.26	3.3e-34	3	5
ENSCSEP00000028657	zf-C2H2	PF00096.26	3.3e-34	4	5
ENSCSEP00000028657	zf-C2H2	PF00096.26	3.3e-34	5	5
ENSCSEP00000028747	zf-C2H2	PF00096.26	4.3e-34	1	5
ENSCSEP00000028747	zf-C2H2	PF00096.26	4.3e-34	2	5
ENSCSEP00000028747	zf-C2H2	PF00096.26	4.3e-34	3	5
ENSCSEP00000028747	zf-C2H2	PF00096.26	4.3e-34	4	5
ENSCSEP00000028747	zf-C2H2	PF00096.26	4.3e-34	5	5
ENSCSEP00000028694	zf-C2H2	PF00096.26	4.7e-34	1	5
ENSCSEP00000028694	zf-C2H2	PF00096.26	4.7e-34	2	5
ENSCSEP00000028694	zf-C2H2	PF00096.26	4.7e-34	3	5
ENSCSEP00000028694	zf-C2H2	PF00096.26	4.7e-34	4	5
ENSCSEP00000028694	zf-C2H2	PF00096.26	4.7e-34	5	5
ENSCSEP00000028719	zf-C2H2	PF00096.26	4.4e-31	1	4
ENSCSEP00000028719	zf-C2H2	PF00096.26	4.4e-31	2	4
ENSCSEP00000028719	zf-C2H2	PF00096.26	4.4e-31	3	4
ENSCSEP00000028719	zf-C2H2	PF00096.26	4.4e-31	4	4
ENSCSEP00000028719	zf-met	PF12874.7	1.6e-06	1	1
ENSCSEP00000028675	zf-met	PF12874.7	4.6e-06	1	1
ENSCSEP00000028657	zf-met	PF12874.7	5.2e-06	1	1
ENSCSEP00000028747	zf-met	PF12874.7	6.4e-06	1	1
ENSCSEP00000028694	zf-met	PF12874.7	6.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000029139	-	9937	-	ENSCSEP00000028747	1989 (aa)	-	-
ENSCSET00000029087	-	10026	XM_017031586	ENSCSEP00000028694	1998 (aa)	XP_016887075	UPI0007DC9F39
ENSCSET00000029111	-	5733	-	ENSCSEP00000028719	1843 (aa)	-	-
ENSCSET00000029064	-	10295	XM_008308030	ENSCSEP00000028675	1944 (aa)	XP_008306252	UPI00049847B7
ENSCSET00000029043	-	9924	-	ENSCSEP00000028657	1959 (aa)	XP_024910352	UPI000D62EC8D

Gene Model

Click here to download ENSCSEG00000018342's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000018342's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000018342	rreb1a	88	50.980	ENSG00000124782	RREB1	91	57.386	Homo_sapiens
ENSCSEG00000018342	rreb1a	87	49.020	ENSAPLG00000004726	RREB1	88	49.020	Anas_platyrhynchos
ENSCSEG00000018342	rreb1a	84	45.461	ENSACAG00000000520	RREB1	89	45.928	Anolis_carolinensis
ENSCSEG00000018342	rreb1a	93	50.980	ENSANAG00000029040	RREB1	94	56.757	Aotus_nancymaae
ENSCSEG00000018342	rreb1a	84	49.057	ENSAMXG00000015314	rreb1b	93	49.057	Astyanax_mexicanus
ENSCSEG00000018342	rreb1a	87	53.793	ENSAMXG00000019028	rreb1a	95	53.649	Astyanax_mexicanus
ENSCSEG00000018342	rreb1a	88	50.980	ENSCJAG00000021358	RREB1	94	55.405	Callithrix_jacchus
ENSCSEG00000018342	rreb1a	75	49.020	ENSCAFG00000009527	RREB1	94	46.774	Canis_familiaris
ENSCSEG00000018342	rreb1a	80	49.020	ENSCAFG00020013260	RREB1	88	49.020	Canis_lupus_dingo
ENSCSEG00000018342	rreb1a	89	50.980	ENSCCAG00000021905	RREB1	94	55.405	Cebus_capucinus
ENSCSEG00000018342	rreb1a	89	50.980	ENSCATG00000043662	RREB1	93	56.522	Cercocebus_atys
ENSCSEG00000018342	rreb1a	83	44.280	ENSCSAG00000007376	RREB1	94	45.098	Chlorocebus_sabaeus
ENSCSEG00000018342	rreb1a	94	49.020	ENSCPBG00000008709	RREB1	87	49.020	Chrysemys_picta_bellii
ENSCSEG00000018342	rreb1a	89	50.980	ENSCANG00000032835	RREB1	94	53.947	Colobus_angolensis_palliatus
ENSCSEG00000018342	rreb1a	100	47.607	ENSDARG00000063701	rreb1a	96	53.274	Danio_rerio
ENSCSEG00000018342	rreb1a	93	50.980	ENSDORG00000006979	Rreb1	93	50.980	Dipodomys_ordii
ENSCSEG00000018342	rreb1a	91	49.020	ENSEASG00005012054	RREB1	88	49.020	Equus_asinus_asinus
ENSCSEG00000018342	rreb1a	91	49.020	ENSECAG00000018169	RREB1	88	49.020	Equus_caballus
ENSCSEG00000018342	rreb1a	88	49.020	ENSFALG00000013231	RREB1	87	49.020	Ficedula_albicollis
ENSCSEG00000018342	rreb1a	79	50.980	ENSFDAG00000004213	RREB1	78	79.412	Fukomys_damarensis
ENSCSEG00000018342	rreb1a	93	49.020	ENSGALG00000012799	RREB1	91	49.020	Gallus_gallus
ENSCSEG00000018342	rreb1a	86	49.020	ENSGAGG00000002213	RREB1	88	49.020	Gopherus_agassizii
ENSCSEG00000018342	rreb1a	89	50.980	ENSGGOG00000004561	RREB1	94	52.703	Gorilla_gorilla
ENSCSEG00000018342	rreb1a	89	68.150	ENSLBEG00000013512	rreb1a	99	69.165	Labrus_bergylta
ENSCSEG00000018342	rreb1a	83	45.143	ENSLACG00000009283	RREB1	93	44.971	Latimeria_chalumnae
ENSCSEG00000018342	rreb1a	89	75.904	ENSLOCG00000011702	rreb1b	100	45.270	Lepisosteus_oculatus
ENSCSEG00000018342	rreb1a	93	50.980	ENSLAFG00000005300	RREB1	90	50.980	Loxodonta_africana
ENSCSEG00000018342	rreb1a	88	45.098	ENSMFAG00000000389	RREB1	93	56.522	Macaca_fascicularis
ENSCSEG00000018342	rreb1a	88	45.098	ENSMMUG00000007852	RREB1	93	56.522	Macaca_mulatta
ENSCSEG00000018342	rreb1a	89	50.980	ENSMNEG00000038556	RREB1	93	56.522	Macaca_nemestrina
ENSCSEG00000018342	rreb1a	89	50.980	ENSMLEG00000040965	RREB1	93	56.522	Mandrillus_leucophaeus
ENSCSEG00000018342	rreb1a	85	49.020	ENSMGAG00000003910	RREB1	86	49.020	Meleagris_gallopavo
ENSCSEG00000018342	rreb1a	82	50.980	ENSMICG00000003683	RREB1	94	56.522	Microcebus_murinus
ENSCSEG00000018342	rreb1a	91	45.164	ENSMODG00000009892	RREB1	99	40.920	Monodelphis_domestica
ENSCSEG00000018342	rreb1a	93	49.020	ENSMPUG00000000558	RREB1	91	49.020	Mustela_putorius_furo
ENSCSEG00000018342	rreb1a	68	47.059	ENSMLUG00000013153	RREB1	89	47.059	Myotis_lucifugus
ENSCSEG00000018342	rreb1a	93	50.980	ENSNGAG00000021506	Rreb1	95	50.980	Nannospalax_galili
ENSCSEG00000018342	rreb1a	56	82.353	ENSNBRG00000016744	rreb1a	98	75.916	Neolamprologus_brichardi
ENSCSEG00000018342	rreb1a	92	52.174	ENSNLEG00000011554	RREB1	94	53.425	Nomascus_leucogenys
ENSCSEG00000018342	rreb1a	92	45.098	ENSMEUG00000015377	RREB1	94	45.098	Notamacropus_eugenii
ENSCSEG00000018342	rreb1a	77	50.980	ENSOPRG00000001966	RREB1	77	50.980	Ochotona_princeps
ENSCSEG00000018342	rreb1a	83	50.980	ENSODEG00000007124	RREB1	87	50.980	Octodon_degus
ENSCSEG00000018342	rreb1a	87	69.186	ENSOMEG00000001389	rreb1a	99	69.186	Oryzias_melastigma
ENSCSEG00000018342	rreb1a	93	50.980	ENSOGAG00000025755	RREB1	94	50.980	Otolemur_garnettii
ENSCSEG00000018342	rreb1a	89	50.980	ENSPPAG00000037017	RREB1	94	52.703	Pan_paniscus
ENSCSEG00000018342	rreb1a	93	49.020	ENSPPRG00000012144	RREB1	89	49.020	Panthera_pardus
ENSCSEG00000018342	rreb1a	88	50.980	ENSPTRG00000017697	RREB1	94	52.703	Pan_troglodytes
ENSCSEG00000018342	rreb1a	67	50.980	ENSPANG00000019553	RREB1	93	56.522	Papio_anubis
ENSCSEG00000018342	rreb1a	92	50.980	ENSPKIG00000006372	rreb1b	88	50.980	Paramormyrops_kingsleyae
ENSCSEG00000018342	rreb1a	90	49.020	ENSPSIG00000006582	RREB1	95	49.020	Pelodiscus_sinensis
ENSCSEG00000018342	rreb1a	88	50.980	ENSPEMG00000014153	Rreb1	93	50.980	Peromyscus_maniculatus_bairdii
ENSCSEG00000018342	rreb1a	87	49.020	ENSPCIG00000012644	RREB1	93	49.020	Phascolarctos_cinereus
ENSCSEG00000018342	rreb1a	83	50.980	ENSPPYG00000016204	RREB1	94	50.980	Pongo_abelii
ENSCSEG00000018342	rreb1a	93	50.980	ENSPCOG00000014821	RREB1	94	53.425	Propithecus_coquereli
ENSCSEG00000018342	rreb1a	93	47.059	ENSPVAG00000014081	RREB1	92	47.059	Pteropus_vampyrus
ENSCSEG00000018342	rreb1a	86	50.980	ENSRNOG00000015701	Rreb1	95	50.980	Rattus_norvegicus
ENSCSEG00000018342	rreb1a	83	50.980	ENSRROG00000039603	RREB1	94	52.632	Rhinopithecus_roxellana
ENSCSEG00000018342	rreb1a	89	50.980	ENSSBOG00000025257	RREB1	94	54.795	Saimiri_boliviensis_boliviensis
ENSCSEG00000018342	rreb1a	90	49.020	ENSSHAG00000005295	RREB1	93	48.936	Sarcophilus_harrisii
ENSCSEG00000018342	rreb1a	93	49.020	ENSSFOG00015001117	rreb1b	91	49.089	Scleropages_formosus
ENSCSEG00000018342	rreb1a	90	50.980	ENSSPUG00000007686	RREB1	86	50.980	Sphenodon_punctatus
ENSCSEG00000018342	rreb1a	84	49.020	ENSTGUG00000002309	RREB1	91	49.020	Taeniopygia_guttata
ENSCSEG00000018342	rreb1a	93	49.020	ENSUAMG00000003741	RREB1	88	49.020	Ursus_americanus
ENSCSEG00000018342	rreb1a	87	49.020	ENSVVUG00000005050	RREB1	88	49.020	Vulpes_vulpes
ENSCSEG00000018342	rreb1a	90	49.020	ENSXETG00000015435	rreb1	91	49.020	Xenopus_tropicalis