EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000018366 (Gene tree)
Gene ID: 103397645
Gene Symbol: atxn2
Alias: si:dkey-165i4.1
Full Name: ataxin 2
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 23789 bases
Position: chrZ:7084394-7108182
Accession: 103397645
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000028737	PAM2	PF07145.15	7.5e-06	1	1
ENSCSEP00000028721	PAM2	PF07145.15	7.5e-06	1	1
ENSCSEP00000028689	PAM2	PF07145.15	7.6e-06	1	1
ENSCSEP00000028737	LsmAD	PF06741.13	1.7e-14	1	1
ENSCSEP00000028721	LsmAD	PF06741.13	1.8e-14	1	1
ENSCSEP00000028689	LsmAD	PF06741.13	1.8e-14	1	1
ENSCSEP00000028737	SM-ATX	PF14438.6	7.3e-20	1	1
ENSCSEP00000028689	SM-ATX	PF14438.6	7.4e-20	1	1
ENSCSEP00000028721	SM-ATX	PF14438.6	7.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000029081	-	6022	XM_008335986	ENSCSEP00000028689	1055 (aa)	XP_008334208	-
ENSCSET00000029129	-	5453	-	ENSCSEP00000028737	1049 (aa)	-	-
ENSCSET00000029113	-	5456	XM_017042909	ENSCSEP00000028721	1050 (aa)	XP_016898398	-

Gene Model

Click here to download ENSCSEG00000018366's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000018366's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000018366	atxn2	100	90.341	ENSCSEG00000009072	-	100	89.489

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000018366	atxn2	96	69.153	ENSG00000204842	ATXN2	90	72.121	Homo_sapiens
ENSCSEG00000018366	atxn2	100	87.018	ENSAPOG00000014663	atxn2	100	87.097	Acanthochromis_polyacanthus
ENSCSEG00000018366	atxn2	97	68.852	ENSAMEG00000013747	ATXN2	100	48.589	Ailuropoda_melanoleuca
ENSCSEG00000018366	atxn2	68	72.222	ENSACIG00000004928	atxn2	100	59.320	Amphilophus_citrinellus
ENSCSEG00000018366	atxn2	99	87.595	ENSAOCG00000001107	atxn2	100	86.780	Amphiprion_ocellaris
ENSCSEG00000018366	atxn2	99	87.763	ENSAPEG00000020250	atxn2	100	86.874	Amphiprion_percula
ENSCSEG00000018366	atxn2	97	69.281	ENSACAG00000002419	ATXN2	95	68.910	Anolis_carolinensis
ENSCSEG00000018366	atxn2	97	68.932	ENSANAG00000022522	ATXN2	100	47.344	Aotus_nancymaae
ENSCSEG00000018366	atxn2	99	69.602	ENSAMXG00000002342	atxn2	100	69.325	Astyanax_mexicanus
ENSCSEG00000018366	atxn2	96	69.625	ENSBTAG00000022069	ATXN2	100	47.932	Bos_taurus
ENSCSEG00000018366	atxn2	97	69.231	ENSCJAG00000011756	ATXN2	100	47.344	Callithrix_jacchus
ENSCSEG00000018366	atxn2	96	69.153	ENSCAFG00000008606	ATXN2	82	48.021	Canis_familiaris
ENSCSEG00000018366	atxn2	95	69.718	ENSCAFG00020017041	ATXN2	100	48.248	Canis_lupus_dingo
ENSCSEG00000018366	atxn2	97	67.937	ENSCHIG00000012141	ATXN2	83	48.200	Capra_hircus
ENSCSEG00000018366	atxn2	96	68.852	ENSTSYG00000002717	ATXN2	100	47.619	Carlito_syrichta
ENSCSEG00000018366	atxn2	73	78.761	ENSCAPG00000013332	ATXN2	98	49.929	Cavia_aperea
ENSCSEG00000018366	atxn2	97	69.132	ENSCPOG00000001390	ATXN2	96	46.154	Cavia_porcellus
ENSCSEG00000018366	atxn2	97	69.231	ENSCCAG00000026267	ATXN2	89	68.780	Cebus_capucinus
ENSCSEG00000018366	atxn2	96	68.814	ENSCATG00000017877	ATXN2	100	47.436	Cercocebus_atys
ENSCSEG00000018366	atxn2	97	68.954	ENSCLAG00000009324	ATXN2	98	51.060	Chinchilla_lanigera
ENSCSEG00000018366	atxn2	96	69.153	ENSCSAG00000002590	ATXN2	94	48.813	Chlorocebus_sabaeus
ENSCSEG00000018366	atxn2	75	62.736	ENSCHOG00000004284	ATXN2	77	62.736	Choloepus_hoffmanni
ENSCSEG00000018366	atxn2	95	56.991	ENSCPBG00000003465	ATXN2	100	57.390	Chrysemys_picta_bellii
ENSCSEG00000018366	atxn2	96	69.180	ENSCANG00000042302	ATXN2	100	48.589	Colobus_angolensis_palliatus
ENSCSEG00000018366	atxn2	96	61.856	ENSCGRG00001022603	Atxn2	87	45.384	Cricetulus_griseus_chok1gshd
ENSCSEG00000018366	atxn2	97	69.256	ENSCGRG00000015823	Atxn2	99	47.891	Cricetulus_griseus_crigri
ENSCSEG00000018366	atxn2	97	82.893	ENSCVAG00000020160	atxn2	100	81.956	Cyprinodon_variegatus
ENSCSEG00000018366	atxn2	100	76.833	ENSDARG00000052897	atxn2	100	58.123	Danio_rerio
ENSCSEG00000018366	atxn2	96	67.893	ENSDNOG00000015696	ATXN2	100	47.594	Dasypus_novemcinctus
ENSCSEG00000018366	atxn2	90	59.477	ENSETEG00000005224	ATXN2	72	59.477	Echinops_telfairi
ENSCSEG00000018366	atxn2	97	69.281	ENSEASG00005012077	ATXN2	99	57.211	Equus_asinus_asinus
ENSCSEG00000018366	atxn2	97	69.381	ENSECAG00000014347	ATXN2	80	49.097	Equus_caballus
ENSCSEG00000018366	atxn2	74	67.869	ENSEEUG00000014635	-	71	67.869	Erinaceus_europaeus
ENSCSEG00000018366	atxn2	99	77.581	ENSELUG00000019632	atxn2	99	67.797	Esox_lucius
ENSCSEG00000018366	atxn2	96	69.153	ENSFCAG00000003178	ATXN2	100	47.763	Felis_catus
ENSCSEG00000018366	atxn2	96	69.508	ENSFDAG00000020942	ATXN2	100	49.735	Fukomys_damarensis
ENSCSEG00000018366	atxn2	91	82.469	ENSFHEG00000019561	atxn2	98	81.791	Fundulus_heteroclitus
ENSCSEG00000018366	atxn2	88	87.153	ENSGMOG00000007412	atxn2	66	87.197	Gadus_morhua
ENSCSEG00000018366	atxn2	97	65.798	ENSGALG00000004625	ATXN2	94	67.708	Gallus_gallus
ENSCSEG00000018366	atxn2	94	88.194	ENSGAFG00000003302	atxn2	99	81.956	Gambusia_affinis
ENSCSEG00000018366	atxn2	96	89.583	ENSGACG00000006295	atxn2	93	89.583	Gasterosteus_aculeatus
ENSCSEG00000018366	atxn2	95	57.998	ENSGAGG00000005014	ATXN2	100	58.301	Gopherus_agassizii
ENSCSEG00000018366	atxn2	97	67.846	ENSGGOG00000002137	ATXN2	100	48.378	Gorilla_gorilla
ENSCSEG00000018366	atxn2	99	84.704	ENSHBUG00000002921	atxn2	100	84.688	Haplochromis_burtoni
ENSCSEG00000018366	atxn2	96	69.508	ENSHGLG00100019351	ATXN2	100	48.897	Heterocephalus_glaber_male
ENSCSEG00000018366	atxn2	99	79.810	ENSHCOG00000005278	atxn2	96	79.621	Hippocampus_comes
ENSCSEG00000018366	atxn2	97	67.343	ENSIPUG00000016649	atxn2	100	66.075	Ictalurus_punctatus
ENSCSEG00000018366	atxn2	97	67.532	ENSSTOG00000000978	ATXN2	100	52.316	Ictidomys_tridecemlineatus
ENSCSEG00000018366	atxn2	100	82.674	ENSKMAG00000000980	atxn2	100	82.768	Kryptolebias_marmoratus
ENSCSEG00000018366	atxn2	60	74.921	ENSLBEG00000017484	atxn2	96	74.290	Labrus_bergylta
ENSCSEG00000018366	atxn2	97	77.597	ENSLOCG00000007880	atxn2	99	67.254	Lepisosteus_oculatus
ENSCSEG00000018366	atxn2	97	69.281	ENSLAFG00000007416	ATXN2	100	49.824	Loxodonta_africana
ENSCSEG00000018366	atxn2	96	68.814	ENSMFAG00000000374	ATXN2	100	47.436	Macaca_fascicularis
ENSCSEG00000018366	atxn2	95	69.366	ENSMMUG00000002226	ATXN2	100	48.108	Macaca_mulatta
ENSCSEG00000018366	atxn2	96	68.814	ENSMNEG00000035588	ATXN2	100	47.436	Macaca_nemestrina
ENSCSEG00000018366	atxn2	96	68.852	ENSMLEG00000024324	ATXN2	100	48.413	Mandrillus_leucophaeus
ENSCSEG00000018366	atxn2	99	86.167	ENSMAMG00000019160	atxn2	99	85.810	Mastacembelus_armatus
ENSCSEG00000018366	atxn2	99	84.608	ENSMZEG00005008476	atxn2	100	84.594	Maylandia_zebra
ENSCSEG00000018366	atxn2	97	70.588	ENSMGAG00000005288	ATXN2	100	49.032	Meleagris_gallopavo
ENSCSEG00000018366	atxn2	66	50.914	ENSMAUG00000008223	-	98	51.268	Mesocricetus_auratus
ENSCSEG00000018366	atxn2	95	69.718	ENSMICG00000013541	ATXN2	99	53.577	Microcebus_murinus
ENSCSEG00000018366	atxn2	81	68.571	ENSMOCG00000005219	Atxn2	98	50.917	Microtus_ochrogaster
ENSCSEG00000018366	atxn2	94	89.247	ENSMMOG00000013189	atxn2	99	75.346	Mola_mola
ENSCSEG00000018366	atxn2	98	68.454	ENSMODG00000012221	ATXN2	85	48.142	Monodelphis_domestica
ENSCSEG00000018366	atxn2	99	84.593	ENSMALG00000018529	atxn2	99	83.812	Monopterus_albus
ENSCSEG00000018366	atxn2	96	67.235	MGP_CAROLIEiJ_G0027692	Atxn2	90	66.877	Mus_caroli
ENSCSEG00000018366	atxn2	96	67.577	ENSMUSG00000042605	Atxn2	98	51.127	Mus_musculus
ENSCSEG00000018366	atxn2	66	50.980	MGP_PahariEiJ_G0024272	Atxn2	98	50.563	Mus_pahari
ENSCSEG00000018366	atxn2	96	67.577	MGP_SPRETEiJ_G0028690	Atxn2	90	67.130	Mus_spretus
ENSCSEG00000018366	atxn2	97	62.623	ENSMPUG00000002212	ATXN2	100	46.914	Mustela_putorius_furo
ENSCSEG00000018366	atxn2	97	69.156	ENSMLUG00000015559	ATXN2	100	48.637	Myotis_lucifugus
ENSCSEG00000018366	atxn2	68	77.029	ENSNBRG00000015794	atxn2	99	63.889	Neolamprologus_brichardi
ENSCSEG00000018366	atxn2	96	69.153	ENSNLEG00000000484	ATXN2	100	47.619	Nomascus_leucogenys
ENSCSEG00000018366	atxn2	83	75.000	ENSMEUG00000012244	-	74	75.000	Notamacropus_eugenii
ENSCSEG00000018366	atxn2	96	61.092	ENSOPRG00000014599	ATXN2	100	46.092	Ochotona_princeps
ENSCSEG00000018366	atxn2	95	68.662	ENSODEG00000010798	ATXN2	100	48.065	Octodon_degus
ENSCSEG00000018366	atxn2	96	89.869	ENSONIG00000014521	atxn2	93	84.384	Oreochromis_niloticus
ENSCSEG00000018366	atxn2	83	75.159	ENSOANG00000004796	ATXN2	100	46.878	Ornithorhynchus_anatinus
ENSCSEG00000018366	atxn2	97	68.301	ENSOCUG00000002855	ATXN2	70	47.838	Oryctolagus_cuniculus
ENSCSEG00000018366	atxn2	94	81.024	ENSORLG00000003606	atxn2	99	80.823	Oryzias_latipes
ENSCSEG00000018366	atxn2	99	80.248	ENSORLG00020000785	atxn2	99	80.340	Oryzias_latipes_hni
ENSCSEG00000018366	atxn2	99	80.439	ENSORLG00015012345	atxn2	99	80.435	Oryzias_latipes_hsok
ENSCSEG00000018366	atxn2	99	81.333	ENSOMEG00000020080	atxn2	99	80.548	Oryzias_melastigma
ENSCSEG00000018366	atxn2	96	68.475	ENSOGAG00000000609	ATXN2	87	47.760	Otolemur_garnettii
ENSCSEG00000018366	atxn2	97	69.156	ENSOARG00000018223	ATXN2	100	48.415	Ovis_aries
ENSCSEG00000018366	atxn2	97	69.256	ENSPPAG00000028043	ATXN2	100	48.288	Pan_paniscus
ENSCSEG00000018366	atxn2	96	69.492	ENSPPRG00000003573	ATXN2	100	47.763	Panthera_pardus
ENSCSEG00000018366	atxn2	96	68.750	ENSPTIG00000021122	ATXN2	100	48.518	Panthera_tigris_altaica
ENSCSEG00000018366	atxn2	97	67.846	ENSPTRG00000029540	ATXN2	100	48.378	Pan_troglodytes
ENSCSEG00000018366	atxn2	96	69.283	ENSPANG00000017168	ATXN2	100	47.436	Papio_anubis
ENSCSEG00000018366	atxn2	97	78.361	ENSPKIG00000023134	atxn2	100	69.700	Paramormyrops_kingsleyae
ENSCSEG00000018366	atxn2	97	71.569	ENSPSIG00000002353	-	95	71.154	Pelodiscus_sinensis
ENSCSEG00000018366	atxn2	95	86.380	ENSPMGG00000005074	atxn2	93	86.380	Periophthalmus_magnuspinnatus
ENSCSEG00000018366	atxn2	81	69.048	ENSPEMG00000015340	Atxn2	98	51.127	Peromyscus_maniculatus_bairdii
ENSCSEG00000018366	atxn2	59	66.964	ENSPCIG00000006165	-	89	71.809	Phascolarctos_cinereus
ENSCSEG00000018366	atxn2	62	76.000	ENSPFOG00000005857	atxn2	100	74.742	Poecilia_formosa
ENSCSEG00000018366	atxn2	97	82.779	ENSPLAG00000015241	atxn2	100	82.224	Poecilia_latipinna
ENSCSEG00000018366	atxn2	97	83.268	ENSPMEG00000016681	atxn2	100	82.700	Poecilia_mexicana
ENSCSEG00000018366	atxn2	95	87.456	ENSPREG00000014825	atxn2	100	82.170	Poecilia_reticulata
ENSCSEG00000018366	atxn2	96	68.814	ENSPPYG00000004963	ATXN2	86	48.637	Pongo_abelii
ENSCSEG00000018366	atxn2	94	67.626	ENSPCOG00000022031	ATXN2	100	48.439	Propithecus_coquereli
ENSCSEG00000018366	atxn2	90	69.153	ENSPVAG00000013179	ATXN2	73	68.770	Pteropus_vampyrus
ENSCSEG00000018366	atxn2	60	71.994	ENSPNYG00000016981	atxn2	98	70.728	Pundamilia_nyererei
ENSCSEG00000018366	atxn2	100	71.563	ENSPNAG00000010889	atxn2	100	70.245	Pygocentrus_nattereri
ENSCSEG00000018366	atxn2	97	67.961	ENSRNOG00000001256	Atxn2	99	47.271	Rattus_norvegicus
ENSCSEG00000018366	atxn2	95	66.901	ENSRBIG00000039212	ATXN2	100	47.436	Rhinopithecus_bieti
ENSCSEG00000018366	atxn2	96	69.180	ENSRROG00000031170	ATXN2	100	47.436	Rhinopithecus_roxellana
ENSCSEG00000018366	atxn2	95	69.366	ENSSBOG00000031563	ATXN2	89	68.780	Saimiri_boliviensis_boliviensis
ENSCSEG00000018366	atxn2	97	69.481	ENSSHAG00000007304	ATXN2	100	49.601	Sarcophilus_harrisii
ENSCSEG00000018366	atxn2	87	79.286	ENSSFOG00015017229	atxn2	100	54.685	Scleropages_formosus
ENSCSEG00000018366	atxn2	99	87.368	ENSSMAG00000004627	atxn2	100	86.755	Scophthalmus_maximus
ENSCSEG00000018366	atxn2	100	86.406	ENSSDUG00000001223	atxn2	100	85.927	Seriola_dumerili
ENSCSEG00000018366	atxn2	94	92.115	ENSSLDG00000019837	atxn2	100	64.631	Seriola_lalandi_dorsalis
ENSCSEG00000018366	atxn2	69	68.852	ENSSARG00000006291	ATXN2	67	68.033	Sorex_araneus
ENSCSEG00000018366	atxn2	99	87.380	ENSSPAG00000000377	atxn2	98	86.890	Stegastes_partitus
ENSCSEG00000018366	atxn2	96	68.814	ENSSSCG00000009834	ATXN2	94	56.749	Sus_scrofa
ENSCSEG00000018366	atxn2	97	55.380	ENSTGUG00000006497	ATXN2	100	55.956	Taeniopygia_guttata
ENSCSEG00000018366	atxn2	94	80.561	ENSTRUG00000016801	atxn2	99	80.661	Takifugu_rubripes
ENSCSEG00000018366	atxn2	83	67.692	ENSTBEG00000001985	ATXN2	83	67.692	Tupaia_belangeri
ENSCSEG00000018366	atxn2	84	65.763	ENSTTRG00000000952	ATXN2	59	62.500	Tursiops_truncatus
ENSCSEG00000018366	atxn2	96	69.153	ENSUAMG00000025295	ATXN2	94	48.551	Ursus_americanus
ENSCSEG00000018366	atxn2	95	69.718	ENSUMAG00000007315	ATXN2	100	48.248	Ursus_maritimus
ENSCSEG00000018366	atxn2	86	69.231	ENSVPAG00000005940	ATXN2	90	57.252	Vicugna_pacos
ENSCSEG00000018366	atxn2	95	69.718	ENSVVUG00000016107	ATXN2	100	48.338	Vulpes_vulpes
ENSCSEG00000018366	atxn2	60	76.984	ENSXCOG00000010001	atxn2	99	77.207	Xiphophorus_couchianus
ENSCSEG00000018366	atxn2	97	83.284	ENSXMAG00000003481	atxn2	100	82.621	Xiphophorus_maculatus