EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000018512 (Gene tree)
Gene ID: 103393247
Gene Symbol: rpusd1
Alias: fe26f08|wu:fe26f08|zgc:153465
Full Name: RNA pseudouridylate synthase domain-containing protein 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 2823 bases
Position: chr17:11370607-11373429
Accession: 103393247
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000028919	PseudoU_synth_2	PF00849.22	1.5e-25	1	1
ENSCSEP00000028924	PseudoU_synth_2	PF00849.22	2.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000029314	-	936	-	ENSCSEP00000028919	311 (aa)	-	-
ENSCSET00000029320	-	885	XM_008330141	ENSCSEP00000028924	294 (aa)	XP_008328364	-

Gene Model

Click here to download ENSCSEG00000018512's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000018512's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000018512	rpusd1	100	55.016	ENSG00000007376	RPUSD1	100	66.071	Homo_sapiens
ENSCSEG00000018512	rpusd1	99	78.218	ENSAPOG00000022221	rpusd1	99	79.208	Acanthochromis_polyacanthus
ENSCSEG00000018512	rpusd1	100	57.285	ENSAMEG00000007461	RPUSD1	99	57.285	Ailuropoda_melanoleuca
ENSCSEG00000018512	rpusd1	98	80.592	ENSACIG00000015863	rpusd1	98	80.592	Amphilophus_citrinellus
ENSCSEG00000018512	rpusd1	98	80.921	ENSAOCG00000021975	rpusd1	95	80.921	Amphiprion_ocellaris
ENSCSEG00000018512	rpusd1	98	81.250	ENSAPEG00000001316	rpusd1	95	81.250	Amphiprion_percula
ENSCSEG00000018512	rpusd1	98	79.605	ENSATEG00000002984	rpusd1	98	81.250	Anabas_testudineus
ENSCSEG00000018512	rpusd1	77	57.438	ENSAPLG00000012316	RPUSD1	98	57.438	Anas_platyrhynchos
ENSCSEG00000018512	rpusd1	100	63.123	ENSACAG00000008953	RPUSD1	100	63.123	Anolis_carolinensis
ENSCSEG00000018512	rpusd1	100	55.128	ENSANAG00000024709	RPUSD1	99	55.128	Aotus_nancymaae
ENSCSEG00000018512	rpusd1	98	80.984	ENSACLG00000013692	rpusd1	98	80.984	Astatotilapia_calliptera
ENSCSEG00000018512	rpusd1	99	67.918	ENSAMXG00000019802	rpusd1	99	67.918	Astyanax_mexicanus
ENSCSEG00000018512	rpusd1	100	57.792	ENSBTAG00000000179	RPUSD1	99	57.792	Bos_taurus
ENSCSEG00000018512	rpusd1	100	54.808	ENSCJAG00000012253	RPUSD1	99	54.808	Callithrix_jacchus
ENSCSEG00000018512	rpusd1	100	56.954	ENSCAFG00000019614	RPUSD1	99	56.954	Canis_familiaris
ENSCSEG00000018512	rpusd1	100	56.954	ENSCAFG00020008891	RPUSD1	99	56.954	Canis_lupus_dingo
ENSCSEG00000018512	rpusd1	100	58.117	ENSCHIG00000012872	RPUSD1	99	58.117	Capra_hircus
ENSCSEG00000018512	rpusd1	100	56.146	ENSTSYG00000036934	RPUSD1	92	64.167	Carlito_syrichta
ENSCSEG00000018512	rpusd1	100	56.066	ENSCAPG00000014219	RPUSD1	99	56.066	Cavia_aperea
ENSCSEG00000018512	rpusd1	100	56.066	ENSCPOG00000034604	RPUSD1	99	56.066	Cavia_porcellus
ENSCSEG00000018512	rpusd1	100	54.808	ENSCCAG00000034385	RPUSD1	99	54.808	Cebus_capucinus
ENSCSEG00000018512	rpusd1	100	55.663	ENSCATG00000042983	RPUSD1	99	55.663	Cercocebus_atys
ENSCSEG00000018512	rpusd1	100	56.066	ENSCLAG00000013966	RPUSD1	99	56.066	Chinchilla_lanigera
ENSCSEG00000018512	rpusd1	100	55.340	ENSCSAG00000012121	RPUSD1	99	55.340	Chlorocebus_sabaeus
ENSCSEG00000018512	rpusd1	99	61.589	ENSCPBG00000021101	RPUSD1	99	61.589	Chrysemys_picta_bellii
ENSCSEG00000018512	rpusd1	86	62.598	ENSCANG00000028576	RPUSD1	90	62.598	Colobus_angolensis_palliatus
ENSCSEG00000018512	rpusd1	100	56.667	ENSCGRG00001014253	Rpusd1	99	56.667	Cricetulus_griseus_chok1gshd
ENSCSEG00000018512	rpusd1	100	56.667	ENSCGRG00000017995	Rpusd1	99	56.667	Cricetulus_griseus_crigri
ENSCSEG00000018512	rpusd1	99	76.080	ENSCVAG00000022746	rpusd1	99	76.080	Cyprinodon_variegatus
ENSCSEG00000018512	rpusd1	100	70.270	ENSDARG00000060192	rpusd1	100	70.270	Danio_rerio
ENSCSEG00000018512	rpusd1	100	54.397	ENSDNOG00000003721	RPUSD1	99	54.397	Dasypus_novemcinctus
ENSCSEG00000018512	rpusd1	100	56.436	ENSDORG00000026656	Rpusd1	99	56.766	Dipodomys_ordii
ENSCSEG00000018512	rpusd1	97	49.675	ENSEBUG00000008767	rpusd1	92	49.675	Eptatretus_burgeri
ENSCSEG00000018512	rpusd1	100	55.696	ENSEASG00005018421	RPUSD1	75	55.696	Equus_asinus_asinus
ENSCSEG00000018512	rpusd1	100	68.627	ENSELUG00000014307	rpusd1	89	69.608	Esox_lucius
ENSCSEG00000018512	rpusd1	100	57.947	ENSFCAG00000010359	RPUSD1	99	57.947	Felis_catus
ENSCSEG00000018512	rpusd1	100	63.333	ENSFALG00000003211	RPUSD1	100	63.333	Ficedula_albicollis
ENSCSEG00000018512	rpusd1	100	56.066	ENSFDAG00000013398	RPUSD1	99	56.066	Fukomys_damarensis
ENSCSEG00000018512	rpusd1	99	75.329	ENSFHEG00000004736	rpusd1	99	76.316	Fundulus_heteroclitus
ENSCSEG00000018512	rpusd1	99	68.647	ENSGMOG00000010756	rpusd1	98	70.957	Gadus_morhua
ENSCSEG00000018512	rpusd1	100	62.706	ENSGALG00000005315	RPUSD1	100	62.706	Gallus_gallus
ENSCSEG00000018512	rpusd1	99	75.748	ENSGAFG00000009886	rpusd1	99	75.748	Gambusia_affinis
ENSCSEG00000018512	rpusd1	99	78.289	ENSGACG00000014276	rpusd1	97	80.795	Gasterosteus_aculeatus
ENSCSEG00000018512	rpusd1	99	61.258	ENSGAGG00000004181	RPUSD1	99	61.258	Gopherus_agassizii
ENSCSEG00000018512	rpusd1	100	55.987	ENSGGOG00000013997	RPUSD1	89	66.379	Gorilla_gorilla
ENSCSEG00000018512	rpusd1	98	81.311	ENSHBUG00000023728	rpusd1	98	81.311	Haplochromis_burtoni
ENSCSEG00000018512	rpusd1	100	55.410	ENSHGLG00000002595	RPUSD1	99	55.410	Heterocephalus_glaber_female
ENSCSEG00000018512	rpusd1	100	55.410	ENSHGLG00100014303	RPUSD1	99	55.410	Heterocephalus_glaber_male
ENSCSEG00000018512	rpusd1	99	75.427	ENSHCOG00000002390	rpusd1	99	75.427	Hippocampus_comes
ENSCSEG00000018512	rpusd1	99	65.000	ENSIPUG00000001570	rpusd1	99	66.000	Ictalurus_punctatus
ENSCSEG00000018512	rpusd1	100	56.209	ENSSTOG00000004276	RPUSD1	99	56.209	Ictidomys_tridecemlineatus
ENSCSEG00000018512	rpusd1	100	56.250	ENSJJAG00000015696	Rpusd1	99	56.250	Jaculus_jaculus
ENSCSEG00000018512	rpusd1	99	75.415	ENSKMAG00000017287	rpusd1	99	75.415	Kryptolebias_marmoratus
ENSCSEG00000018512	rpusd1	98	78.947	ENSLBEG00000022502	rpusd1	98	80.263	Labrus_bergylta
ENSCSEG00000018512	rpusd1	98	78.947	ENSLBEG00000013354	RPUSD1	98	80.263	Labrus_bergylta
ENSCSEG00000018512	rpusd1	99	61.538	ENSLACG00000008869	RPUSD1	99	61.538	Latimeria_chalumnae
ENSCSEG00000018512	rpusd1	73	81.395	ENSLOCG00000005682	rpusd1	99	81.395	Lepisosteus_oculatus
ENSCSEG00000018512	rpusd1	100	54.849	ENSLAFG00000002115	RPUSD1	99	54.849	Loxodonta_africana
ENSCSEG00000018512	rpusd1	100	55.663	ENSMFAG00000003961	RPUSD1	99	55.663	Macaca_fascicularis
ENSCSEG00000018512	rpusd1	100	55.663	ENSMMUG00000000842	RPUSD1	99	55.663	Macaca_mulatta
ENSCSEG00000018512	rpusd1	100	55.663	ENSMNEG00000042712	RPUSD1	99	55.663	Macaca_nemestrina
ENSCSEG00000018512	rpusd1	100	55.663	ENSMLEG00000030591	RPUSD1	99	55.663	Mandrillus_leucophaeus
ENSCSEG00000018512	rpusd1	97	84.437	ENSMAMG00000004735	rpusd1	97	84.437	Mastacembelus_armatus
ENSCSEG00000018512	rpusd1	98	80.984	ENSMZEG00005003214	rpusd1	98	80.984	Maylandia_zebra
ENSCSEG00000018512	rpusd1	97	63.390	ENSMGAG00000005447	RPUSD1	99	63.390	Meleagris_gallopavo
ENSCSEG00000018512	rpusd1	86	54.724	ENSMAUG00000019998	Rpusd1	97	54.724	Mesocricetus_auratus
ENSCSEG00000018512	rpusd1	100	55.882	ENSMICG00000017561	RPUSD1	99	55.700	Microcebus_murinus
ENSCSEG00000018512	rpusd1	100	55.776	ENSMOCG00000014082	Rpusd1	99	55.375	Microtus_ochrogaster
ENSCSEG00000018512	rpusd1	100	74.754	ENSMMOG00000012569	rpusd1	99	77.049	Mola_mola
ENSCSEG00000018512	rpusd1	100	61.184	ENSMODG00000016882	RPUSD1	99	61.184	Monodelphis_domestica
ENSCSEG00000018512	rpusd1	98	83.224	ENSMALG00000017818	rpusd1	98	83.224	Monopterus_albus
ENSCSEG00000018512	rpusd1	100	56.721	MGP_CAROLIEiJ_G0021244	Rpusd1	99	56.721	Mus_caroli
ENSCSEG00000018512	rpusd1	100	56.209	ENSMUSG00000041199	Rpusd1	99	56.536	Mus_musculus
ENSCSEG00000018512	rpusd1	100	55.738	MGP_PahariEiJ_G0023562	Rpusd1	99	55.519	Mus_pahari
ENSCSEG00000018512	rpusd1	100	56.209	MGP_SPRETEiJ_G0022155	Rpusd1	99	56.536	Mus_spretus
ENSCSEG00000018512	rpusd1	100	56.187	ENSMPUG00000015897	RPUSD1	99	56.291	Mustela_putorius_furo
ENSCSEG00000018512	rpusd1	100	56.169	ENSMLUG00000001089	RPUSD1	99	56.311	Myotis_lucifugus
ENSCSEG00000018512	rpusd1	100	56.209	ENSNGAG00000003595	Rpusd1	99	56.209	Nannospalax_galili
ENSCSEG00000018512	rpusd1	98	78.361	ENSNBRG00000006457	rpusd1	99	78.644	Neolamprologus_brichardi
ENSCSEG00000018512	rpusd1	55	45.402	ENSNLEG00000008424	-	98	45.714	Nomascus_leucogenys
ENSCSEG00000018512	rpusd1	100	62.290	ENSMEUG00000016049	RPUSD1	99	62.290	Notamacropus_eugenii
ENSCSEG00000018512	rpusd1	100	50.676	ENSOPRG00000008340	RPUSD1	99	50.676	Ochotona_princeps
ENSCSEG00000018512	rpusd1	100	56.352	ENSODEG00000016945	RPUSD1	99	56.352	Octodon_degus
ENSCSEG00000018512	rpusd1	98	81.967	ENSONIG00000015672	rpusd1	99	81.967	Oreochromis_niloticus
ENSCSEG00000018512	rpusd1	99	76.333	ENSORLG00000013009	rpusd1	99	76.333	Oryzias_latipes
ENSCSEG00000018512	rpusd1	99	76.333	ENSORLG00020010382	rpusd1	99	76.333	Oryzias_latipes_hni
ENSCSEG00000018512	rpusd1	99	75.333	ENSORLG00015021354	rpusd1	99	75.333	Oryzias_latipes_hsok
ENSCSEG00000018512	rpusd1	99	75.168	ENSOMEG00000021426	rpusd1	99	75.168	Oryzias_melastigma
ENSCSEG00000018512	rpusd1	100	55.128	ENSOGAG00000003795	RPUSD1	99	55.128	Otolemur_garnettii
ENSCSEG00000018512	rpusd1	100	58.033	ENSOARG00000014254	RPUSD1	99	58.033	Ovis_aries
ENSCSEG00000018512	rpusd1	100	55.663	ENSPPAG00000034797	RPUSD1	89	66.379	Pan_paniscus
ENSCSEG00000018512	rpusd1	100	57.947	ENSPPRG00000012389	RPUSD1	99	58.333	Panthera_pardus
ENSCSEG00000018512	rpusd1	100	58.278	ENSPTIG00000008545	RPUSD1	99	58.333	Panthera_tigris_altaica
ENSCSEG00000018512	rpusd1	100	55.663	ENSPTRG00000007565	RPUSD1	89	66.379	Pan_troglodytes
ENSCSEG00000018512	rpusd1	100	55.663	ENSPANG00000024401	RPUSD1	99	55.663	Papio_anubis
ENSCSEG00000018512	rpusd1	100	69.205	ENSPKIG00000018890	rpusd1	91	69.205	Paramormyrops_kingsleyae
ENSCSEG00000018512	rpusd1	100	62.376	ENSPSIG00000013945	RPUSD1	100	62.376	Pelodiscus_sinensis
ENSCSEG00000018512	rpusd1	99	74.570	ENSPMGG00000014950	rpusd1	98	74.570	Periophthalmus_magnuspinnatus
ENSCSEG00000018512	rpusd1	100	55.556	ENSPEMG00000000497	Rpusd1	99	55.556	Peromyscus_maniculatus_bairdii
ENSCSEG00000018512	rpusd1	100	53.074	ENSPMAG00000001563	rpusd1	100	55.410	Petromyzon_marinus
ENSCSEG00000018512	rpusd1	100	63.667	ENSPCIG00000021216	-	93	63.667	Phascolarctos_cinereus
ENSCSEG00000018512	rpusd1	99	75.667	ENSPFOG00000007946	rpusd1	99	75.667	Poecilia_formosa
ENSCSEG00000018512	rpusd1	99	75.667	ENSPLAG00000011925	rpusd1	99	75.667	Poecilia_latipinna
ENSCSEG00000018512	rpusd1	99	75.667	ENSPMEG00000002910	rpusd1	99	75.667	Poecilia_mexicana
ENSCSEG00000018512	rpusd1	99	76.744	ENSPREG00000019851	rpusd1	99	76.744	Poecilia_reticulata
ENSCSEG00000018512	rpusd1	100	44.000	ENSPCAG00000002258	RPUSD1	99	44.000	Procavia_capensis
ENSCSEG00000018512	rpusd1	100	54.487	ENSPCOG00000022582	RPUSD1	99	54.839	Propithecus_coquereli
ENSCSEG00000018512	rpusd1	100	52.244	ENSPVAG00000013104	RPUSD1	99	52.244	Pteropus_vampyrus
ENSCSEG00000018512	rpusd1	98	81.311	ENSPNYG00000024076	rpusd1	98	81.311	Pundamilia_nyererei
ENSCSEG00000018512	rpusd1	100	66.780	ENSPNAG00000013806	rpusd1	100	66.780	Pygocentrus_nattereri
ENSCSEG00000018512	rpusd1	100	56.106	ENSRNOG00000023639	Rpusd1	99	56.209	Rattus_norvegicus
ENSCSEG00000018512	rpusd1	100	55.987	ENSRBIG00000030238	RPUSD1	99	55.987	Rhinopithecus_bieti
ENSCSEG00000018512	rpusd1	100	55.987	ENSRROG00000036663	RPUSD1	99	55.987	Rhinopithecus_roxellana
ENSCSEG00000018512	rpusd1	100	57.191	ENSSBOG00000033063	RPUSD1	99	57.616	Saimiri_boliviensis_boliviensis
ENSCSEG00000018512	rpusd1	100	62.667	ENSSHAG00000013500	RPUSD1	99	62.667	Sarcophilus_harrisii
ENSCSEG00000018512	rpusd1	99	72.483	ENSSFOG00015014394	rpusd1	99	72.483	Scleropages_formosus
ENSCSEG00000018512	rpusd1	98	82.237	ENSSMAG00000008045	rpusd1	91	83.224	Scophthalmus_maximus
ENSCSEG00000018512	rpusd1	89	90.421	ENSSDUG00000001829	rpusd1	95	85.855	Seriola_dumerili
ENSCSEG00000018512	rpusd1	89	90.421	ENSSLDG00000020853	rpusd1	95	85.855	Seriola_lalandi_dorsalis
ENSCSEG00000018512	rpusd1	56	70.659	ENSSARG00000011187	-	100	70.659	Sorex_araneus
ENSCSEG00000018512	rpusd1	62	58.201	ENSSPUG00000005119	-	99	58.201	Sphenodon_punctatus
ENSCSEG00000018512	rpusd1	98	83.224	ENSSPAG00000012708	rpusd1	98	83.224	Stegastes_partitus
ENSCSEG00000018512	rpusd1	100	56.090	ENSSSCG00000008000	RPUSD1	98	63.922	Sus_scrofa
ENSCSEG00000018512	rpusd1	86	67.857	ENSTGUG00000015375	RPUSD1	99	67.857	Taeniopygia_guttata
ENSCSEG00000018512	rpusd1	98	79.934	ENSTRUG00000003041	rpusd1	97	79.934	Takifugu_rubripes
ENSCSEG00000018512	rpusd1	99	71.918	ENSTNIG00000002660	rpusd1	96	79.231	Tetraodon_nigroviridis
ENSCSEG00000018512	rpusd1	100	57.051	ENSTTRG00000010167	RPUSD1	99	57.051	Tursiops_truncatus
ENSCSEG00000018512	rpusd1	100	57.191	ENSUAMG00000012736	RPUSD1	99	57.191	Ursus_americanus
ENSCSEG00000018512	rpusd1	100	57.191	ENSUMAG00000021174	RPUSD1	99	56.954	Ursus_maritimus
ENSCSEG00000018512	rpusd1	100	57.285	ENSVVUG00000012357	RPUSD1	99	57.285	Vulpes_vulpes
ENSCSEG00000018512	rpusd1	100	61.462	ENSXETG00000007184	rpusd1	99	61.462	Xenopus_tropicalis
ENSCSEG00000018512	rpusd1	98	76.316	ENSXCOG00000017930	rpusd1	98	76.316	Xiphophorus_couchianus
ENSCSEG00000018512	rpusd1	98	76.974	ENSXMAG00000024084	rpusd1	98	76.974	Xiphophorus_maculatus