EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000018535 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 12435 bases
Position: chr13:51346-63780
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000028959	zf-C2H2	PF00096.26	2.1e-63	1	11
ENSCSEP00000028959	zf-C2H2	PF00096.26	2.1e-63	2	11
ENSCSEP00000028959	zf-C2H2	PF00096.26	2.1e-63	3	11
ENSCSEP00000028959	zf-C2H2	PF00096.26	2.1e-63	4	11
ENSCSEP00000028959	zf-C2H2	PF00096.26	2.1e-63	5	11
ENSCSEP00000028959	zf-C2H2	PF00096.26	2.1e-63	6	11
ENSCSEP00000028959	zf-C2H2	PF00096.26	2.1e-63	7	11
ENSCSEP00000028959	zf-C2H2	PF00096.26	2.1e-63	8	11
ENSCSEP00000028959	zf-C2H2	PF00096.26	2.1e-63	9	11
ENSCSEP00000028959	zf-C2H2	PF00096.26	2.1e-63	10	11
ENSCSEP00000028959	zf-C2H2	PF00096.26	2.1e-63	11	11
ENSCSEP00000028952	zf-C2H2	PF00096.26	2.6e-46	1	8
ENSCSEP00000028952	zf-C2H2	PF00096.26	2.6e-46	2	8
ENSCSEP00000028952	zf-C2H2	PF00096.26	2.6e-46	3	8
ENSCSEP00000028952	zf-C2H2	PF00096.26	2.6e-46	4	8
ENSCSEP00000028952	zf-C2H2	PF00096.26	2.6e-46	5	8
ENSCSEP00000028952	zf-C2H2	PF00096.26	2.6e-46	6	8
ENSCSEP00000028952	zf-C2H2	PF00096.26	2.6e-46	7	8
ENSCSEP00000028952	zf-C2H2	PF00096.26	2.6e-46	8	8
ENSCSEP00000028952	zf-met	PF12874.7	1.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000029347	-	924	-	ENSCSEP00000028952	307 (aa)	-	-
ENSCSET00000029355	-	1362	-	ENSCSEP00000028959	453 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000018535's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000018535's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000018535	-	79	42.857	ENSCSEG00000010311	snai2	67	37.500
ENSCSEG00000018535	-	92	36.145	ENSCSEG00000001385	patz1	57	31.076
ENSCSEG00000018535	-	84	44.643	ENSCSEG00000004273	-	74	44.643
ENSCSEG00000018535	-	92	38.122	ENSCSEG00000018497	-	53	39.935
ENSCSEG00000018535	-	93	41.121	ENSCSEG00000011586	znf236	71	42.982
ENSCSEG00000018535	-	96	36.000	ENSCSEG00000020730	-	85	38.596
ENSCSEG00000018535	-	90	36.937	ENSCSEG00000008596	scrt1b	52	36.937
ENSCSEG00000018535	-	87	47.368	ENSCSEG00000010769	si:dkey-89b17.4	89	47.368
ENSCSEG00000018535	-	99	38.596	ENSCSEG00000005491	-	91	33.014
ENSCSEG00000018535	-	87	43.600	ENSCSEG00000008510	-	52	43.913
ENSCSEG00000018535	-	95	40.650	ENSCSEG00000005983	-	97	38.506
ENSCSEG00000018535	-	82	45.178	ENSCSEG00000000356	znf648	100	45.178
ENSCSEG00000018535	-	97	40.161	ENSCSEG00000004348	-	88	40.161
ENSCSEG00000018535	-	81	38.922	ENSCSEG00000009915	-	53	38.922
ENSCSEG00000018535	-	81	33.333	ENSCSEG00000018571	-	54	33.333
ENSCSEG00000018535	-	81	43.979	ENSCSEG00000007055	-	99	44.715
ENSCSEG00000018535	-	99	42.038	ENSCSEG00000017729	GFI1	53	42.038
ENSCSEG00000018535	-	85	42.222	ENSCSEG00000001315	gfi1b	63	40.854
ENSCSEG00000018535	-	83	38.017	ENSCSEG00000008903	-	85	38.017
ENSCSEG00000018535	-	87	46.154	ENSCSEG00000001168	-	90	42.453
ENSCSEG00000018535	-	87	42.400	ENSCSEG00000021216	wt1a	57	43.802
ENSCSEG00000018535	-	78	49.057	ENSCSEG00000021317	-	64	49.020
ENSCSEG00000018535	-	81	34.307	ENSCSEG00000003536	znf341	51	34.307
ENSCSEG00000018535	-	83	40.984	ENSCSEG00000005974	-	86	40.984
ENSCSEG00000018535	-	80	43.617	ENSCSEG00000008539	-	58	42.233
ENSCSEG00000018535	-	87	38.431	ENSCSEG00000013879	znf319b	88	38.431
ENSCSEG00000018535	-	89	38.922	ENSCSEG00000019029	-	97	43.689
ENSCSEG00000018535	-	79	39.773	ENSCSEG00000019599	-	63	39.773
ENSCSEG00000018535	-	84	40.964	ENSCSEG00000004721	-	67	40.964
ENSCSEG00000018535	-	84	37.647	ENSCSEG00000011817	-	55	35.211
ENSCSEG00000018535	-	85	40.303	ENSCSEG00000013398	-	90	43.750
ENSCSEG00000018535	-	79	46.667	ENSCSEG00000010264	-	83	46.667
ENSCSEG00000018535	-	83	47.541	ENSCSEG00000008502	-	71	47.541
ENSCSEG00000018535	-	87	47.826	ENSCSEG00000014604	sall4	58	47.059
ENSCSEG00000018535	-	97	43.210	ENSCSEG00000004210	-	97	43.852
ENSCSEG00000018535	-	93	46.939	ENSCSEG00000019848	-	55	46.939
ENSCSEG00000018535	-	98	38.739	ENSCSEG00000018822	-	95	38.739
ENSCSEG00000018535	-	99	37.795	ENSCSEG00000003757	-	98	42.683
ENSCSEG00000018535	-	80	48.718	ENSCSEG00000018698	ZBTB14	57	44.262
ENSCSEG00000018535	-	81	47.134	ENSCSEG00000005456	si:ch211-79k12.2	54	40.191
ENSCSEG00000018535	-	87	42.487	ENSCSEG00000004265	-	59	42.487
ENSCSEG00000018535	-	86	32.456	ENSCSEG00000012389	znf646	90	32.456
ENSCSEG00000018535	-	83	46.809	ENSCSEG00000001748	-	97	46.809
ENSCSEG00000018535	-	85	30.366	ENSCSEG00000005462	-	61	30.601
ENSCSEG00000018535	-	84	40.594	ENSCSEG00000019979	prdm5	78	40.359
ENSCSEG00000018535	-	84	38.710	ENSCSEG00000021542	scrt2	53	38.710
ENSCSEG00000018535	-	93	46.565	ENSCSEG00000019047	-	77	47.500
ENSCSEG00000018535	-	79	49.367	ENSCSEG00000015593	-	81	53.731
ENSCSEG00000018535	-	81	43.590	ENSCSEG00000010453	-	62	43.590
ENSCSEG00000018535	-	83	40.625	ENSCSEG00000018829	-	70	40.625
ENSCSEG00000018535	-	79	37.423	ENSCSEG00000017606	zbtb47b	70	35.417
ENSCSEG00000018535	-	81	44.444	ENSCSEG00000001771	-	59	44.860
ENSCSEG00000018535	-	83	32.917	ENSCSEG00000013102	PRDM15	51	30.337
ENSCSEG00000018535	-	75	44.615	ENSCSEG00000010614	-	88	45.714
ENSCSEG00000018535	-	79	42.857	ENSCSEG00000021022	-	58	42.857
ENSCSEG00000018535	-	79	42.202	ENSCSEG00000010423	-	69	41.079
ENSCSEG00000018535	-	87	38.554	ENSCSEG00000005935	ZNF319	88	39.815
ENSCSEG00000018535	-	93	41.919	ENSCSEG00000020696	-	97	41.892
ENSCSEG00000018535	-	93	38.750	ENSCSEG00000015585	-	82	40.351
ENSCSEG00000018535	-	83	38.426	ENSCSEG00000014637	-	97	38.537
ENSCSEG00000018535	-	97	37.667	ENSCSEG00000018815	-	79	43.363

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000018535	-	78	74.286	ENSG00000197483	ZNF628	94	61.429	Homo_sapiens
ENSCSEG00000018535	-	95	64.211	ENSAPOG00000023504	-	81	57.705	Acanthochromis_polyacanthus
ENSCSEG00000018535	-	79	71.845	ENSAMEG00000003482	ZNF628	58	69.406	Ailuropoda_melanoleuca
ENSCSEG00000018535	-	92	55.959	ENSACAG00000011023	ZNF628	60	66.228	Anolis_carolinensis
ENSCSEG00000018535	-	83	70.588	ENSCJAG00000040315	ZNF628	60	61.905	Callithrix_jacchus
ENSCSEG00000018535	-	88	64.122	ENSCAFG00000032330	-	99	48.601	Canis_familiaris
ENSCSEG00000018535	-	81	73.822	ENSCAFG00020015487	ZNF628	61	70.732	Canis_lupus_dingo
ENSCSEG00000018535	-	80	73.298	ENSCHIG00000022075	ZNF628	64	67.273	Capra_hircus
ENSCSEG00000018535	-	89	61.538	ENSCCAG00000025672	ZNF628	63	64.609	Cebus_capucinus
ENSCSEG00000018535	-	81	73.298	ENSCATG00000040762	ZNF628	61	61.089	Cercocebus_atys
ENSCSEG00000018535	-	81	73.298	ENSCSAG00000019655	ZNF628	60	61.089	Chlorocebus_sabaeus
ENSCSEG00000018535	-	83	70.098	ENSCGRG00001019468	Zfp628	51	66.667	Cricetulus_griseus_chok1gshd
ENSCSEG00000018535	-	79	69.744	ENSFALG00000014367	-	97	67.647	Ficedula_albicollis
ENSCSEG00000018535	-	81	67.616	ENSGMOG00000004063	ZNF628	99	69.444	Gadus_morhua
ENSCSEG00000018535	-	82	68.049	ENSGACG00000010515	ZNF628	99	67.805	Gasterosteus_aculeatus
ENSCSEG00000018535	-	79	76.692	ENSGGOG00000026699	ZNF628	54	75.735	Gorilla_gorilla
ENSCSEG00000018535	-	85	67.593	ENSHGLG00000015628	ZNF628	60	68.519	Heterocephalus_glaber_female
ENSCSEG00000018535	-	81	58.929	ENSHGLG00100006343	ZNF628	64	56.721	Heterocephalus_glaber_male
ENSCSEG00000018535	-	87	67.431	ENSSTOG00000026126	ZNF628	57	65.368	Ictidomys_tridecemlineatus
ENSCSEG00000018535	-	85	67.123	ENSJJAG00000000983	Zfp628	64	67.123	Jaculus_jaculus
ENSCSEG00000018535	-	94	64.151	ENSLBEG00000015264	-	93	65.155	Labrus_bergylta
ENSCSEG00000018535	-	84	72.251	ENSLAFG00000022529	ZNF628	100	60.232	Loxodonta_africana
ENSCSEG00000018535	-	81	73.298	ENSMMUG00000001770	ZNF628	59	59.041	Macaca_mulatta
ENSCSEG00000018535	-	81	73.298	ENSMNEG00000040894	ZNF628	61	61.089	Macaca_nemestrina
ENSCSEG00000018535	-	81	57.843	ENSMGAG00000016847	-	99	57.843	Meleagris_gallopavo
ENSCSEG00000018535	-	85	60.914	ENSMAUG00000003007	Zfp628	61	60.914	Mesocricetus_auratus
ENSCSEG00000018535	-	87	63.090	ENSMOCG00000020296	Zfp628	61	63.090	Microtus_ochrogaster
ENSCSEG00000018535	-	88	73.359	ENSMMOG00000016712	-	50	74.308	Mola_mola
ENSCSEG00000018535	-	83	66.222	ENSMODG00000017494	ZNF628	58	62.857	Monodelphis_domestica
ENSCSEG00000018535	-	85	66.210	MGP_CAROLIEiJ_G0029135	Zfp628	55	66.210	Mus_caroli
ENSCSEG00000018535	-	85	66.210	ENSMUSG00000074406	Zfp628	55	66.210	Mus_musculus
ENSCSEG00000018535	-	87	66.210	MGP_PahariEiJ_G0021003	Zfp628	51	66.210	Mus_pahari
ENSCSEG00000018535	-	85	66.210	MGP_SPRETEiJ_G0030188	Zfp628	55	66.210	Mus_spretus
ENSCSEG00000018535	-	89	66.071	ENSMPUG00000020191	ZNF628	60	70.098	Mustela_putorius_furo
ENSCSEG00000018535	-	85	66.667	ENSNGAG00000012888	Zfp628	56	61.058	Nannospalax_galili
ENSCSEG00000018535	-	81	73.298	ENSNLEG00000010532	ZNF628	61	61.811	Nomascus_leucogenys
ENSCSEG00000018535	-	83	67.117	ENSMEUG00000012147	ZNF628	66	62.903	Notamacropus_eugenii
ENSCSEG00000018535	-	80	88.187	ENSONIG00000012825	-	98	86.933	Oreochromis_niloticus
ENSCSEG00000018535	-	79	97.030	ENSORLG00020006433	-	79	97.030	Oryzias_latipes_hni
ENSCSEG00000018535	-	81	65.086	ENSOGAG00000034730	ZNF628	61	62.055	Otolemur_garnettii
ENSCSEG00000018535	-	78	52.444	ENSOARG00000001314	-	56	49.138	Ovis_aries
ENSCSEG00000018535	-	81	65.502	ENSPPAG00000033056	ZNF628	55	45.952	Pan_paniscus
ENSCSEG00000018535	-	81	65.502	ENSPTRG00000052545	ZNF628	60	62.800	Pan_troglodytes
ENSCSEG00000018535	-	81	74.054	ENSPANG00000012246	ZNF628	61	62.302	Papio_anubis
ENSCSEG00000018535	-	93	79.323	ENSPMGG00000014604	-	79	79.323	Periophthalmus_magnuspinnatus
ENSCSEG00000018535	-	85	66.210	ENSPEMG00000009113	Zfp628	65	66.210	Peromyscus_maniculatus_bairdii
ENSCSEG00000018535	-	85	62.451	ENSPCIG00000013076	ZNF628	61	61.868	Phascolarctos_cinereus
ENSCSEG00000018535	-	85	59.316	ENSPCAG00000008589	ZNF628	82	62.051	Procavia_capensis
ENSCSEG00000018535	-	81	66.818	ENSPCOG00000026399	ZNF628	58	64.807	Propithecus_coquereli
ENSCSEG00000018535	-	81	73.298	ENSRROG00000039960	ZNF628	50	70.588	Rhinopithecus_roxellana
ENSCSEG00000018535	-	83	84.099	ENSSLDG00000023060	-	74	84.099	Seriola_lalandi_dorsalis
ENSCSEG00000018535	-	82	74.510	ENSSPAG00000021516	-	84	73.913	Stegastes_partitus
ENSCSEG00000018535	-	83	69.608	ENSSSCG00000025343	ZNF628	60	69.608	Sus_scrofa
ENSCSEG00000018535	-	80	87.115	ENSTNIG00000001164	ZNF628	98	87.115	Tetraodon_nigroviridis
ENSCSEG00000018535	-	81	68.098	ENSTTRG00000008506	ZNF628	59	53.304	Tursiops_truncatus
ENSCSEG00000018535	-	81	73.298	ENSUAMG00000020195	ZNF628	60	70.588	Ursus_americanus
ENSCSEG00000018535	-	95	67.273	ENSXETG00000008801	znf628	95	62.705	Xenopus_tropicalis