EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000018571 (Gene tree)
Gene ID: 103377330
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 708-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 5906 bases
Position: chr3:11511426-11517331
Accession: 103377330
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000028993	zf-C2H2	PF00096.26	3.6e-21	1	3
ENSCSEP00000028993	zf-C2H2	PF00096.26	3.6e-21	2	3
ENSCSEP00000028993	zf-C2H2	PF00096.26	3.6e-21	3	3
ENSCSEP00000028993	zf-met	PF12874.7	3.8e-16	1	2
ENSCSEP00000028993	zf-met	PF12874.7	3.8e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000029390	-	4175	XM_008308121	ENSCSEP00000028993	586 (aa)	XP_008306343	-

Gene Model

Click here to download ENSCSEG00000018571's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000018571's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000018571	-	62	35.294	ENSCSEG00000012389	znf646	60	35.294
ENSCSEG00000018571	-	59	34.733	ENSCSEG00000001748	-	97	34.733
ENSCSEG00000018571	-	53	30.798	ENSCSEG00000019979	prdm5	76	30.798
ENSCSEG00000018571	-	56	30.556	ENSCSEG00000010311	snai2	60	30.952
ENSCSEG00000018571	-	53	41.667	ENSCSEG00000018829	-	67	41.667
ENSCSEG00000018571	-	56	31.429	ENSCSEG00000007055	-	96	33.906
ENSCSEG00000018571	-	63	41.509	ENSCSEG00000001168	-	78	41.509
ENSCSEG00000018571	-	53	36.559	ENSCSEG00000015585	-	72	36.559
ENSCSEG00000018571	-	66	30.952	ENSCSEG00000011586	znf236	72	31.100
ENSCSEG00000018571	-	57	30.205	ENSCSEG00000005935	ZNF319	85	30.205
ENSCSEG00000018571	-	64	37.273	ENSCSEG00000019047	-	88	39.344
ENSCSEG00000018571	-	61	30.409	ENSCSEG00000000356	znf648	99	30.409
ENSCSEG00000018571	-	53	37.037	ENSCSEG00000001385	patz1	66	31.579
ENSCSEG00000018571	-	54	33.333	ENSCSEG00000018535	-	81	33.333
ENSCSEG00000018571	-	52	30.451	ENSCSEG00000013879	znf319b	74	31.203
ENSCSEG00000018571	-	52	43.750	ENSCSEG00000008539	-	55	43.750
ENSCSEG00000018571	-	55	30.968	ENSCSEG00000013398	-	87	31.148
ENSCSEG00000018571	-	65	32.245	ENSCSEG00000005983	-	93	32.245
ENSCSEG00000018571	-	53	40.678	ENSCSEG00000020696	-	96	39.474
ENSCSEG00000018571	-	53	34.146	ENSCSEG00000018815	-	79	34.146
ENSCSEG00000018571	-	61	31.661	ENSCSEG00000005974	-	87	32.593
ENSCSEG00000018571	-	66	30.814	ENSCSEG00000004273	-	72	31.873
ENSCSEG00000018571	-	53	31.633	ENSCSEG00000001771	-	76	30.227
ENSCSEG00000018571	-	55	30.864	ENSCSEG00000004721	-	71	30.435
ENSCSEG00000018571	-	53	40.566	ENSCSEG00000020730	-	84	31.875
ENSCSEG00000018571	-	65	31.307	ENSCSEG00000004348	-	79	33.051
ENSCSEG00000018571	-	52	33.803	ENSCSEG00000008533	-	60	31.126
ENSCSEG00000018571	-	54	34.694	ENSCSEG00000001315	gfi1b	53	34.694
ENSCSEG00000018571	-	57	33.898	ENSCSEG00000008510	-	53	33.898
ENSCSEG00000018571	-	53	43.077	ENSCSEG00000008502	-	69	32.000
ENSCSEG00000018571	-	63	41.593	ENSCSEG00000010453	-	62	40.336
ENSCSEG00000018571	-	66	32.804	ENSCSEG00000003757	-	100	36.134
ENSCSEG00000018571	-	54	40.678	ENSCSEG00000004265	-	55	40.678
ENSCSEG00000018571	-	64	30.901	ENSCSEG00000004210	-	96	31.278
ENSCSEG00000018571	-	72	32.824	ENSCSEG00000005491	-	79	32.824
ENSCSEG00000018571	-	57	31.518	ENSCSEG00000010423	-	60	40.650
ENSCSEG00000018571	-	67	33.613	ENSCSEG00000019848	-	60	33.613

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000018571	-	58	63.300	ENSACIG00000011516	-	88	62.426	Amphilophus_citrinellus
ENSCSEG00000018571	-	51	46.154	ENSAPEG00000009826	-	61	46.154	Amphiprion_percula
ENSCSEG00000018571	-	54	32.456	ENSCING00000024379	-	80	32.456	Ciona_intestinalis
ENSCSEG00000018571	-	73	34.426	ENSELUG00000010470	-	55	34.426	Esox_lucius
ENSCSEG00000018571	-	80	61.616	ENSLBEG00000014195	-	74	61.616	Labrus_bergylta
ENSCSEG00000018571	-	56	42.857	ENSOPRG00000011038	ZNF771	94	42.857	Ochotona_princeps
ENSCSEG00000018571	-	61	33.333	ENSPCIG00000013801	-	50	31.250	Phascolarctos_cinereus
ENSCSEG00000018571	-	52	43.820	ENSTBEG00000017192	ZNF771	66	43.820	Tupaia_belangeri
ENSCSEG00000018571	-	63	58.735	ENSXCOG00000003001	-	99	58.735	Xiphophorus_couchianus