EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Description

Ensembl ID: ENSCSEG00000018602 (Gene tree)
Gene ID: 103395062
Gene Symbol: limk1b
Alias: si:ch211-13l22.4
Full Name: LIM domain kinase 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 14227 bases
Position: chr19:6231565-6245791
Accession: 103395024
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000029066	MMR_HSR1	PF01926.23	6.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000029440	-	2569	XM_008332557	ENSCSEP00000029043	692 (aa)	XP_008330779	UPI0004955769
ENSCSET00000029463	-	1440	XM_017041826	ENSCSEP00000029066	479 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000018602's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem04210	Apoptosis	KEGG
csem04810	Regulation of actin cytoskeleton	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000018602's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000018602	limk1b	68	75.610	ENSCSEG00000009655	SEPT4	89	75.610
ENSCSEG00000018602	limk1b	67	44.548	ENSCSEG00000012690	sept9a	92	44.548
ENSCSEG00000018602	limk1b	66	46.541	ENSCSEG00000011498	sept12	87	46.541
ENSCSEG00000018602	limk1b	76	50.409	ENSCSEG00000010117	-	85	50.409
ENSCSEG00000018602	limk1b	59	41.115	ENSCSEG00000002026	sept6	61	41.115
ENSCSEG00000018602	limk1b	62	42.997	ENSCSEG00000015261	sept8b	88	38.601
ENSCSEG00000018602	limk1b	64	70.779	ENSCSEG00000009877	-	95	70.779
ENSCSEG00000018602	limk1b	74	67.227	ENSCSEG00000019641	sept5a	94	71.717
ENSCSEG00000018602	limk1b	62	40.803	ENSCSEG00000002994	sept9b	50	40.064
ENSCSEG00000018602	limk1b	61	43.729	ENSCSEG00000017105	sept8a	68	43.729
ENSCSEG00000018602	limk1b	61	58.362	ENSCSEG00000002096	sept15	87	49.560
ENSCSEG00000018602	limk1b	74	59.207	ENSCSEG00000019626	zgc:63587	94	59.207
ENSCSEG00000018602	limk1b	73	55.398	ENSCSEG00000017561	sept2	99	55.398
ENSCSEG00000018602	limk1b	56	55.390	ENSCSEG00000004191	sept7b	87	48.974