EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000018621 (Gene tree)
Gene ID: 103390251
Gene Symbol: mtrex
Alias: julie|mtrex|skiv2l2|wu:fd11a05|zgc:63838
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 20486 bases
Position: chr14:24768814-24789299
Accession: 103390251
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000029140	rRNA_proc-arch	PF13234.6	1.9e-87	1	1
ENSCSEP00000029114	rRNA_proc-arch	PF13234.6	2e-87	1	1
ENSCSEP00000029140	DEAD	PF00270.29	7e-17	1	1
ENSCSEP00000029114	DEAD	PF00270.29	7.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000029540	-	3096	-	ENSCSEP00000029140	1031 (aa)	-	-
ENSCSET00000029515	-	4410	XM_008326035	ENSCSEP00000029114	1053 (aa)	XP_008324257	-

Gene Model

Click here to download ENSCSEG00000018621's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000018621's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000018621	mtrex	92	34.945	ENSCSEG00000011326	skiv2l	76	35.484

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000018621	mtrex	98	81.853	ENSG00000039123	MTREX	100	81.853	Homo_sapiens
ENSCSEG00000018621	mtrex	98	92.478	ENSAPOG00000007814	mtrex	100	92.285	Acanthochromis_polyacanthus
ENSCSEG00000018621	mtrex	98	81.870	ENSAMEG00000013856	MTREX	100	81.870	Ailuropoda_melanoleuca
ENSCSEG00000018621	mtrex	100	89.428	ENSACIG00000015117	mtrex	100	89.331	Amphilophus_citrinellus
ENSCSEG00000018621	mtrex	98	92.960	ENSAOCG00000011884	mtrex	100	92.768	Amphiprion_ocellaris
ENSCSEG00000018621	mtrex	98	92.864	ENSAPEG00000019384	mtrex	100	92.671	Amphiprion_percula
ENSCSEG00000018621	mtrex	98	93.919	ENSATEG00000015117	mtrex	100	93.919	Anabas_testudineus
ENSCSEG00000018621	mtrex	94	84.346	ENSAPLG00000009694	MTREX	98	84.969	Anas_platyrhynchos
ENSCSEG00000018621	mtrex	98	83.142	ENSACAG00000015200	MTREX	97	82.983	Anolis_carolinensis
ENSCSEG00000018621	mtrex	98	82.156	ENSANAG00000023095	MTREX	100	81.948	Aotus_nancymaae
ENSCSEG00000018621	mtrex	98	93.443	ENSACLG00000001921	mtrex	100	93.153	Astatotilapia_calliptera
ENSCSEG00000018621	mtrex	93	85.903	ENSAMXG00000018751	mtrex	99	85.903	Astyanax_mexicanus
ENSCSEG00000018621	mtrex	98	82.105	ENSBTAG00000010518	MTREX	100	82.105	Bos_taurus
ENSCSEG00000018621	mtrex	92	52.356	WBGene00012342	mtr-4	91	53.454	Caenorhabditis_elegans
ENSCSEG00000018621	mtrex	98	81.002	ENSCJAG00000001773	MTREX	100	81.576	Callithrix_jacchus
ENSCSEG00000018621	mtrex	98	82.044	ENSCAFG00000006818	MTREX	100	82.044	Canis_familiaris
ENSCSEG00000018621	mtrex	98	82.044	ENSCAFG00020024352	MTREX	100	82.044	Canis_lupus_dingo
ENSCSEG00000018621	mtrex	98	82.044	ENSCHIG00000024413	MTREX	100	82.044	Capra_hircus
ENSCSEG00000018621	mtrex	86	90.244	ENSTSYG00000007389	MTREX	100	82.765	Carlito_syrichta
ENSCSEG00000018621	mtrex	85	74.091	ENSCAPG00000008696	MTREX	92	74.091	Cavia_aperea
ENSCSEG00000018621	mtrex	98	82.139	ENSCPOG00000009797	MTREX	100	82.044	Cavia_porcellus
ENSCSEG00000018621	mtrex	98	82.156	ENSCCAG00000014177	MTREX	100	81.948	Cebus_capucinus
ENSCSEG00000018621	mtrex	98	81.948	ENSCATG00000042153	MTREX	100	81.948	Cercocebus_atys
ENSCSEG00000018621	mtrex	98	81.948	ENSCLAG00000006622	MTREX	100	81.948	Chinchilla_lanigera
ENSCSEG00000018621	mtrex	98	78.286	ENSCSAG00000016445	MTREX	100	78.286	Chlorocebus_sabaeus
ENSCSEG00000018621	mtrex	63	97.222	ENSCHOG00000010936	-	62	97.222	Choloepus_hoffmanni
ENSCSEG00000018621	mtrex	98	82.917	ENSCPBG00000026551	MTREX	94	82.917	Chrysemys_picta_bellii
ENSCSEG00000018621	mtrex	98	65.388	ENSCING00000003239	-	99	65.388	Ciona_intestinalis
ENSCSEG00000018621	mtrex	98	64.593	ENSCSAVG00000009304	-	100	69.313	Ciona_savignyi
ENSCSEG00000018621	mtrex	98	81.853	ENSCANG00000035770	MTREX	100	81.853	Colobus_angolensis_palliatus
ENSCSEG00000018621	mtrex	98	82.156	ENSCGRG00001024680	Mtrex	100	82.027	Cricetulus_griseus_chok1gshd
ENSCSEG00000018621	mtrex	98	82.156	ENSCGRG00000000307	Mtrex	100	82.027	Cricetulus_griseus_crigri
ENSCSEG00000018621	mtrex	98	91.128	ENSCVAG00000004556	mtrex	100	91.225	Cyprinodon_variegatus
ENSCSEG00000018621	mtrex	98	85.811	ENSDARG00000013457	mtrex	100	85.507	Danio_rerio
ENSCSEG00000018621	mtrex	98	82.112	ENSDNOG00000015375	MTREX	100	82.112	Dasypus_novemcinctus
ENSCSEG00000018621	mtrex	98	82.330	ENSDORG00000006782	Mtrex	100	82.330	Dipodomys_ordii
ENSCSEG00000018621	mtrex	96	62.709	FBgn0001986	Mtr4	96	62.732	Drosophila_melanogaster
ENSCSEG00000018621	mtrex	89	66.941	ENSETEG00000000727	MTREX	90	66.667	Echinops_telfairi
ENSCSEG00000018621	mtrex	98	73.199	ENSEBUG00000012869	mtrex	99	73.199	Eptatretus_burgeri
ENSCSEG00000018621	mtrex	98	81.948	ENSEASG00005013270	MTREX	100	81.362	Equus_asinus_asinus
ENSCSEG00000018621	mtrex	98	82.044	ENSECAG00000023723	MTREX	100	87.907	Equus_caballus
ENSCSEG00000018621	mtrex	97	74.757	ENSEEUG00000000527	MTREX	100	74.757	Erinaceus_europaeus
ENSCSEG00000018621	mtrex	97	85.868	ENSELUG00000004898	mtrex	100	89.811	Esox_lucius
ENSCSEG00000018621	mtrex	98	82.044	ENSFCAG00000010575	MTREX	100	82.044	Felis_catus
ENSCSEG00000018621	mtrex	98	81.809	ENSFALG00000010850	MTREX	100	81.809	Ficedula_albicollis
ENSCSEG00000018621	mtrex	98	81.853	ENSFDAG00000011199	MTREX	100	81.853	Fukomys_damarensis
ENSCSEG00000018621	mtrex	99	91.126	ENSFHEG00000023014	mtrex	100	89.317	Fundulus_heteroclitus
ENSCSEG00000018621	mtrex	98	85.618	ENSGMOG00000014702	mtrex	100	85.811	Gadus_morhua
ENSCSEG00000018621	mtrex	99	81.671	ENSGALG00000014709	MTREX	87	81.671	Gallus_gallus
ENSCSEG00000018621	mtrex	98	91.128	ENSGAFG00000012425	mtrex	100	91.128	Gambusia_affinis
ENSCSEG00000018621	mtrex	98	87.838	ENSGACG00000016260	mtrex	100	87.838	Gasterosteus_aculeatus
ENSCSEG00000018621	mtrex	98	82.788	ENSGAGG00000020036	MTREX	100	82.788	Gopherus_agassizii
ENSCSEG00000018621	mtrex	98	81.853	ENSGGOG00000001867	MTREX	100	81.853	Gorilla_gorilla
ENSCSEG00000018621	mtrex	98	93.443	ENSHBUG00000006229	mtrex	100	93.153	Haplochromis_burtoni
ENSCSEG00000018621	mtrex	98	81.818	ENSHGLG00000019445	SKIV2L2	100	81.818	Heterocephalus_glaber_female
ENSCSEG00000018621	mtrex	98	81.818	ENSHGLG00100011833	SKIV2L2	100	81.818	Heterocephalus_glaber_male
ENSCSEG00000018621	mtrex	94	88.744	ENSHCOG00000019995	mtrex	100	90.112	Hippocampus_comes
ENSCSEG00000018621	mtrex	98	85.549	ENSIPUG00000024348	skiv2l2	100	85.549	Ictalurus_punctatus
ENSCSEG00000018621	mtrex	98	81.948	ENSSTOG00000010802	MTREX	100	81.948	Ictidomys_tridecemlineatus
ENSCSEG00000018621	mtrex	98	77.981	ENSJJAG00000020975	Mtrex	100	77.981	Jaculus_jaculus
ENSCSEG00000018621	mtrex	98	91.418	ENSKMAG00000012642	mtrex	100	91.418	Kryptolebias_marmoratus
ENSCSEG00000018621	mtrex	98	92.285	ENSLBEG00000019367	mtrex	100	92.093	Labrus_bergylta
ENSCSEG00000018621	mtrex	98	83.381	ENSLACG00000009075	MTREX	100	83.381	Latimeria_chalumnae
ENSCSEG00000018621	mtrex	98	85.164	ENSLOCG00000010186	mtrex	100	85.164	Lepisosteus_oculatus
ENSCSEG00000018621	mtrex	98	80.115	ENSLAFG00000010497	MTREX	100	80.019	Loxodonta_africana
ENSCSEG00000018621	mtrex	98	81.948	ENSMFAG00000031610	MTREX	100	81.948	Macaca_fascicularis
ENSCSEG00000018621	mtrex	98	82.078	ENSMMUG00000010379	MTREX	100	82.078	Macaca_mulatta
ENSCSEG00000018621	mtrex	98	81.948	ENSMNEG00000032746	MTREX	100	81.948	Macaca_nemestrina
ENSCSEG00000018621	mtrex	98	81.948	ENSMLEG00000041051	MTREX	100	81.948	Mandrillus_leucophaeus
ENSCSEG00000018621	mtrex	100	90.495	ENSMAMG00000016753	mtrex	98	94.472	Mastacembelus_armatus
ENSCSEG00000018621	mtrex	98	93.443	ENSMZEG00005000414	mtrex	100	93.153	Maylandia_zebra
ENSCSEG00000018621	mtrex	94	61.089	ENSMGAG00000003980	MTREX	99	60.887	Meleagris_gallopavo
ENSCSEG00000018621	mtrex	98	82.027	ENSMAUG00000010727	Mtrex	100	82.027	Mesocricetus_auratus
ENSCSEG00000018621	mtrex	98	82.235	ENSMICG00000012779	MTREX	100	82.235	Microcebus_murinus
ENSCSEG00000018621	mtrex	98	81.853	ENSMOCG00000019886	Mtrex	100	81.948	Microtus_ochrogaster
ENSCSEG00000018621	mtrex	100	89.061	ENSMMOG00000002476	mtrex	100	89.286	Mola_mola
ENSCSEG00000018621	mtrex	98	82.788	ENSMODG00000019494	MTREX	100	82.772	Monodelphis_domestica
ENSCSEG00000018621	mtrex	100	83.588	ENSMALG00000002917	mtrex	98	89.209	Monopterus_albus
ENSCSEG00000018621	mtrex	98	81.757	MGP_CAROLIEiJ_G0018896	Mtrex	100	81.757	Mus_caroli
ENSCSEG00000018621	mtrex	98	81.757	ENSMUSG00000016018	Mtrex	100	81.757	Mus_musculus
ENSCSEG00000018621	mtrex	98	81.757	MGP_PahariEiJ_G0015967	Mtrex	100	81.757	Mus_pahari
ENSCSEG00000018621	mtrex	98	81.757	MGP_SPRETEiJ_G0019775	Mtrex	100	81.757	Mus_spretus
ENSCSEG00000018621	mtrex	98	82.044	ENSMPUG00000007619	MTREX	100	82.044	Mustela_putorius_furo
ENSCSEG00000018621	mtrex	98	81.393	ENSMLUG00000001152	MTREX	100	81.489	Myotis_lucifugus
ENSCSEG00000018621	mtrex	98	82.044	ENSNGAG00000011938	Mtrex	100	82.044	Nannospalax_galili
ENSCSEG00000018621	mtrex	98	93.346	ENSNBRG00000011293	mtrex	100	93.057	Neolamprologus_brichardi
ENSCSEG00000018621	mtrex	98	78.074	ENSNLEG00000001494	MTREX	100	77.884	Nomascus_leucogenys
ENSCSEG00000018621	mtrex	82	94.118	ENSMEUG00000006496	-	83	94.118	Notamacropus_eugenii
ENSCSEG00000018621	mtrex	98	69.157	ENSOPRG00000008009	MTREX	100	69.157	Ochotona_princeps
ENSCSEG00000018621	mtrex	98	81.375	ENSODEG00000017234	MTREX	100	81.662	Octodon_degus
ENSCSEG00000018621	mtrex	98	93.250	ENSONIG00000007587	mtrex	100	92.960	Oreochromis_niloticus
ENSCSEG00000018621	mtrex	51	78.679	ENSOANG00000004885	-	99	81.977	Ornithorhynchus_anatinus
ENSCSEG00000018621	mtrex	98	82.330	ENSOCUG00000004463	MTREX	100	82.330	Oryctolagus_cuniculus
ENSCSEG00000018621	mtrex	98	91.023	ENSORLG00000005443	mtrex	100	91.023	Oryzias_latipes
ENSCSEG00000018621	mtrex	98	91.023	ENSORLG00020006329	mtrex	100	91.023	Oryzias_latipes_hni
ENSCSEG00000018621	mtrex	98	90.927	ENSORLG00015012924	mtrex	100	90.927	Oryzias_latipes_hsok
ENSCSEG00000018621	mtrex	98	90.760	ENSOMEG00000008825	mtrex	100	90.760	Oryzias_melastigma
ENSCSEG00000018621	mtrex	98	82.139	ENSOGAG00000002886	MTREX	100	82.521	Otolemur_garnettii
ENSCSEG00000018621	mtrex	98	81.810	ENSOARG00000007764	MTREX	100	81.810	Ovis_aries
ENSCSEG00000018621	mtrex	98	81.853	ENSPPAG00000039291	MTREX	100	81.853	Pan_paniscus
ENSCSEG00000018621	mtrex	98	82.044	ENSPPRG00000019701	MTREX	100	82.044	Panthera_pardus
ENSCSEG00000018621	mtrex	98	80.707	ENSPTIG00000009313	MTREX	100	80.707	Panthera_tigris_altaica
ENSCSEG00000018621	mtrex	98	81.853	ENSPTRG00000016878	MTREX	100	81.853	Pan_troglodytes
ENSCSEG00000018621	mtrex	98	81.853	ENSPANG00000009697	MTREX	100	81.853	Papio_anubis
ENSCSEG00000018621	mtrex	98	85.618	ENSPKIG00000020833	mtrex	100	85.618	Paramormyrops_kingsleyae
ENSCSEG00000018621	mtrex	98	82.471	ENSPSIG00000012150	MTREX	100	82.885	Pelodiscus_sinensis
ENSCSEG00000018621	mtrex	100	87.826	ENSPMGG00000002582	mtrex	100	88.332	Periophthalmus_magnuspinnatus
ENSCSEG00000018621	mtrex	94	64.718	ENSPMAG00000009668	mtrex	100	64.753	Petromyzon_marinus
ENSCSEG00000018621	mtrex	94	84.990	ENSPCIG00000024730	MTREX	100	86.870	Phascolarctos_cinereus
ENSCSEG00000018621	mtrex	78	90.524	ENSPFOG00000003141	mtrex	100	92.893	Poecilia_formosa
ENSCSEG00000018621	mtrex	98	91.418	ENSPLAG00000021311	mtrex	100	91.418	Poecilia_latipinna
ENSCSEG00000018621	mtrex	94	90.750	ENSPMEG00000010597	mtrex	99	92.685	Poecilia_mexicana
ENSCSEG00000018621	mtrex	98	91.128	ENSPREG00000003089	mtrex	100	91.128	Poecilia_reticulata
ENSCSEG00000018621	mtrex	97	81.650	ENSPPYG00000015469	MTREX	98	81.650	Pongo_abelii
ENSCSEG00000018621	mtrex	92	72.558	ENSPCAG00000013120	MTREX	94	72.558	Procavia_capensis
ENSCSEG00000018621	mtrex	97	76.625	ENSPCOG00000018092	MTREX	100	76.625	Propithecus_coquereli
ENSCSEG00000018621	mtrex	98	81.853	ENSPVAG00000002445	MTREX	100	81.853	Pteropus_vampyrus
ENSCSEG00000018621	mtrex	98	93.346	ENSPNYG00000006164	mtrex	100	93.057	Pundamilia_nyererei
ENSCSEG00000018621	mtrex	98	86.596	ENSPNAG00000008794	mtrex	100	86.596	Pygocentrus_nattereri
ENSCSEG00000018621	mtrex	97	81.431	ENSRNOG00000010125	Mtrex	97	81.431	Rattus_norvegicus
ENSCSEG00000018621	mtrex	98	80.134	ENSRBIG00000034930	MTREX	100	80.134	Rhinopithecus_bieti
ENSCSEG00000018621	mtrex	98	81.853	ENSRROG00000039895	MTREX	100	81.853	Rhinopithecus_roxellana
ENSCSEG00000018621	mtrex	92	54.060	YJL050W	MTR4	92	53.622	Saccharomyces_cerevisiae
ENSCSEG00000018621	mtrex	98	82.061	ENSSBOG00000026693	MTREX	100	81.948	Saimiri_boliviensis_boliviensis
ENSCSEG00000018621	mtrex	94	84.861	ENSSHAG00000004600	MTREX	100	83.832	Sarcophilus_harrisii
ENSCSEG00000018621	mtrex	100	84.866	ENSSFOG00015014355	skiv2l2	100	86.390	Scleropages_formosus
ENSCSEG00000018621	mtrex	98	92.478	ENSSMAG00000007572	mtrex	100	92.285	Scophthalmus_maximus
ENSCSEG00000018621	mtrex	98	94.214	ENSSDUG00000023789	mtrex	100	93.828	Seriola_dumerili
ENSCSEG00000018621	mtrex	98	94.118	ENSSLDG00000006301	mtrex	100	93.732	Seriola_lalandi_dorsalis
ENSCSEG00000018621	mtrex	98	80.898	ENSSARG00000008387	MTREX	100	80.993	Sorex_araneus
ENSCSEG00000018621	mtrex	88	84.411	ENSSPUG00000007071	MTREX	96	84.411	Sphenodon_punctatus
ENSCSEG00000018621	mtrex	100	88.621	ENSSPAG00000011319	mtrex	100	88.599	Stegastes_partitus
ENSCSEG00000018621	mtrex	98	82.044	ENSSSCG00000016911	MTREX	100	82.044	Sus_scrofa
ENSCSEG00000018621	mtrex	98	81.058	ENSTGUG00000002480	MTREX	100	81.058	Taeniopygia_guttata
ENSCSEG00000018621	mtrex	98	90.453	ENSTRUG00000014571	mtrex	100	90.260	Takifugu_rubripes
ENSCSEG00000018621	mtrex	98	67.622	ENSTBEG00000007769	MTREX	100	67.622	Tupaia_belangeri
ENSCSEG00000018621	mtrex	98	82.297	ENSTTRG00000008678	MTREX	100	82.297	Tursiops_truncatus
ENSCSEG00000018621	mtrex	98	81.853	ENSUAMG00000023061	MTREX	100	81.853	Ursus_americanus
ENSCSEG00000018621	mtrex	98	82.019	ENSUMAG00000009373	MTREX	99	87.429	Ursus_maritimus
ENSCSEG00000018621	mtrex	98	72.848	ENSVPAG00000011174	MTREX	100	72.658	Vicugna_pacos
ENSCSEG00000018621	mtrex	98	82.139	ENSVVUG00000021337	MTREX	100	82.139	Vulpes_vulpes
ENSCSEG00000018621	mtrex	98	84.474	ENSXETG00000032798	MTREX	100	84.474	Xenopus_tropicalis
ENSCSEG00000018621	mtrex	98	91.610	ENSXMAG00000004799	mtrex	100	91.610	Xiphophorus_maculatus