EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000018898 (Gene tree)
Gene ID: 103387849
Gene Symbol: rbfox1l
Alias: Fox-1|ZFmu1A11s|a2bp1l|hm:zeh0082|zeh0082
Full Name: RNA binding protein fox-1 homolog 1-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 7597 bases
Position: chr13:443307-450903
Accession: 103387849
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000029517	Fox-1_C	PF12414.8	4e-36	1	1
ENSCSEP00000029517	RRM_1	PF00076.22	9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000029918	-	1143	XM_008322649	ENSCSEP00000029517	380 (aa)	XP_008320873	-

Gene Model

Click here to download ENSCSEG00000018898's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000018898's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000018898	rbfox1l	88	53.803	ENSCSEG00000015567	RBFOX3	99	52.356
ENSCSEG00000018898	rbfox1l	63	59.930	ENSCSEG00000007748	rbfox2	59	57.045
ENSCSEG00000018898	rbfox1l	73	58.065	ENSCSEG00000020606	RBFOX3	63	66.964
ENSCSEG00000018898	rbfox1l	85	52.255	ENSCSEG00000008840	rbfox1	99	52.255
ENSCSEG00000018898	rbfox1l	63	60.145	ENSCSEG00000007360	-	79	52.406

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000018898	rbfox1l	97	87.634	ENSAPOG00000016304	rbfox1l	98	87.903	Acanthochromis_polyacanthus
ENSCSEG00000018898	rbfox1l	100	82.895	ENSACIG00000006441	rbfox1l	100	82.895	Amphilophus_citrinellus
ENSCSEG00000018898	rbfox1l	88	81.065	ENSAOCG00000020938	rbfox1l	99	81.361	Amphiprion_ocellaris
ENSCSEG00000018898	rbfox1l	100	87.500	ENSAPEG00000008232	rbfox1l	100	88.281	Amphiprion_percula
ENSCSEG00000018898	rbfox1l	100	86.316	ENSATEG00000022649	rbfox1l	100	86.053	Anabas_testudineus
ENSCSEG00000018898	rbfox1l	64	75.904	ENSACAG00000011931	-	91	75.100	Anolis_carolinensis
ENSCSEG00000018898	rbfox1l	100	86.719	ENSACLG00000021394	rbfox1l	100	86.458	Astatotilapia_calliptera
ENSCSEG00000018898	rbfox1l	100	87.173	ENSAMXG00000010470	rbfox1l	100	85.602	Astyanax_mexicanus
ENSCSEG00000018898	rbfox1l	100	57.364	ENSCPBG00000010944	-	100	58.333	Chrysemys_picta_bellii
ENSCSEG00000018898	rbfox1l	100	85.938	ENSCVAG00000007986	rbfox1l	100	86.198	Cyprinodon_variegatus
ENSCSEG00000018898	rbfox1l	100	86.649	ENSDARG00000021184	rbfox1l	100	85.079	Danio_rerio
ENSCSEG00000018898	rbfox1l	100	81.365	ENSELUG00000015077	rbfox1l	100	80.840	Esox_lucius
ENSCSEG00000018898	rbfox1l	94	97.561	ENSFHEG00000016557	rbfox1l	95	97.561	Fundulus_heteroclitus
ENSCSEG00000018898	rbfox1l	100	82.812	ENSGMOG00000005040	rbfox1l	100	82.031	Gadus_morhua
ENSCSEG00000018898	rbfox1l	92	83.380	ENSGAFG00000013211	rbfox1l	97	83.944	Gambusia_affinis
ENSCSEG00000018898	rbfox1l	100	88.021	ENSGACG00000010757	rbfox1l	100	87.760	Gasterosteus_aculeatus
ENSCSEG00000018898	rbfox1l	64	73.061	ENSGAGG00000012440	-	86	74.390	Gopherus_agassizii
ENSCSEG00000018898	rbfox1l	100	86.719	ENSHBUG00000013406	rbfox1l	100	86.458	Haplochromis_burtoni
ENSCSEG00000018898	rbfox1l	100	85.938	ENSHCOG00000020771	rbfox1l	100	85.938	Hippocampus_comes
ENSCSEG00000018898	rbfox1l	99	79.630	ENSIPUG00000000065	rbfox1l	99	79.944	Ictalurus_punctatus
ENSCSEG00000018898	rbfox1l	100	87.047	ENSKMAG00000005146	rbfox1l	100	86.788	Kryptolebias_marmoratus
ENSCSEG00000018898	rbfox1l	100	90.104	ENSLBEG00000017089	rbfox1l	100	89.844	Labrus_bergylta
ENSCSEG00000018898	rbfox1l	100	88.802	ENSMAMG00000019480	rbfox1l	100	88.542	Mastacembelus_armatus
ENSCSEG00000018898	rbfox1l	100	86.719	ENSMZEG00005016374	rbfox1l	100	86.458	Maylandia_zebra
ENSCSEG00000018898	rbfox1l	100	88.158	ENSMMOG00000016530	rbfox1l	100	87.895	Mola_mola
ENSCSEG00000018898	rbfox1l	100	86.842	ENSMALG00000009384	rbfox1l	100	86.316	Monopterus_albus
ENSCSEG00000018898	rbfox1l	100	87.927	ENSNBRG00000003346	rbfox1l	100	87.664	Neolamprologus_brichardi
ENSCSEG00000018898	rbfox1l	100	87.500	ENSONIG00000012754	rbfox1l	100	87.240	Oreochromis_niloticus
ENSCSEG00000018898	rbfox1l	100	86.719	ENSORLG00000011269	rbfox1l	100	87.500	Oryzias_latipes
ENSCSEG00000018898	rbfox1l	100	85.938	ENSORLG00020000162	rbfox1l	100	87.760	Oryzias_latipes_hni
ENSCSEG00000018898	rbfox1l	100	86.198	ENSORLG00015013464	rbfox1l	100	88.021	Oryzias_latipes_hsok
ENSCSEG00000018898	rbfox1l	100	87.240	ENSOMEG00000010584	rbfox1l	100	88.021	Oryzias_melastigma
ENSCSEG00000018898	rbfox1l	100	87.139	ENSPKIG00000012029	rbfox1l	100	86.614	Paramormyrops_kingsleyae
ENSCSEG00000018898	rbfox1l	100	80.840	ENSPMGG00000012082	rbfox1l	100	80.315	Periophthalmus_magnuspinnatus
ENSCSEG00000018898	rbfox1l	100	85.677	ENSPFOG00000009338	rbfox1l	100	86.198	Poecilia_formosa
ENSCSEG00000018898	rbfox1l	85	77.439	ENSPLAG00000012816	rbfox1l	99	77.439	Poecilia_latipinna
ENSCSEG00000018898	rbfox1l	100	81.250	ENSPMEG00000017597	rbfox1l	100	81.510	Poecilia_mexicana
ENSCSEG00000018898	rbfox1l	100	81.250	ENSPREG00000007940	rbfox1l	100	81.510	Poecilia_reticulata
ENSCSEG00000018898	rbfox1l	100	86.458	ENSPNYG00000002098	rbfox1l	100	86.198	Pundamilia_nyererei
ENSCSEG00000018898	rbfox1l	100	85.117	ENSPNAG00000001620	rbfox1l	100	84.073	Pygocentrus_nattereri
ENSCSEG00000018898	rbfox1l	100	86.089	ENSSFOG00015000675	rbfox1l	100	85.827	Scleropages_formosus
ENSCSEG00000018898	rbfox1l	100	89.062	ENSSMAG00000013090	rbfox1l	100	88.281	Scophthalmus_maximus
ENSCSEG00000018898	rbfox1l	100	88.342	ENSSDUG00000008705	rbfox1l	100	88.083	Seriola_dumerili
ENSCSEG00000018898	rbfox1l	100	88.083	ENSSLDG00000022256	rbfox1l	100	87.824	Seriola_lalandi_dorsalis
ENSCSEG00000018898	rbfox1l	100	87.500	ENSSPAG00000016620	rbfox1l	100	88.281	Stegastes_partitus
ENSCSEG00000018898	rbfox1l	96	86.104	ENSTRUG00000015905	rbfox1l	100	83.106	Takifugu_rubripes
ENSCSEG00000018898	rbfox1l	64	83.774	ENSTNIG00000008088	rbfox1l	99	85.227	Tetraodon_nigroviridis
ENSCSEG00000018898	rbfox1l	100	85.417	ENSXMAG00000023471	rbfox1l	100	85.938	Xiphophorus_maculatus