EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000019017 (Gene tree)
Gene ID: 103380723
Gene Symbol: sf3b6
Alias: sf3b14|zgc:86708
Full Name: splicing factor 3b subunit 6
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 3178 bases
Position: chr7:3038435-3041612
Accession: 103380723
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000029680	RRM_1	PF00076.22	2.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000030081	-	2335	XM_008312782	ENSCSEP00000029680	125 (aa)	XP_008311004	UPI0000E3F01A

Gene Model

Click here to download ENSCSEG00000019017's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000019017's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000019017	sf3b6	100	97.600	ENSG00000115128	SF3B6	100	97.600	Homo_sapiens
ENSCSEG00000019017	sf3b6	100	99.200	ENSAPOG00000023788	sf3b6	100	99.200	Acanthochromis_polyacanthus
ENSCSEG00000019017	sf3b6	100	97.600	ENSAMEG00000002786	SF3B6	100	97.600	Ailuropoda_melanoleuca
ENSCSEG00000019017	sf3b6	100	99.200	ENSACIG00000012608	sf3b6	100	99.200	Amphilophus_citrinellus
ENSCSEG00000019017	sf3b6	100	99.200	ENSAOCG00000013394	sf3b6	100	99.200	Amphiprion_ocellaris
ENSCSEG00000019017	sf3b6	100	99.200	ENSAPEG00000015311	sf3b6	100	99.200	Amphiprion_percula
ENSCSEG00000019017	sf3b6	100	99.200	ENSATEG00000016569	sf3b6	100	99.200	Anabas_testudineus
ENSCSEG00000019017	sf3b6	100	97.600	ENSACAG00000011677	SF3B6	100	97.600	Anolis_carolinensis
ENSCSEG00000019017	sf3b6	100	97.600	ENSANAG00000027284	SF3B6	95	97.600	Aotus_nancymaae
ENSCSEG00000019017	sf3b6	100	99.200	ENSACLG00000007793	sf3b6	100	99.200	Astatotilapia_calliptera
ENSCSEG00000019017	sf3b6	100	97.600	ENSAMXG00000034888	sf3b6	100	97.600	Astyanax_mexicanus
ENSCSEG00000019017	sf3b6	100	96.000	ENSBTAG00000049128	-	100	96.000	Bos_taurus
ENSCSEG00000019017	sf3b6	100	97.600	ENSBTAG00000003407	SF3B6	100	97.600	Bos_taurus
ENSCSEG00000019017	sf3b6	100	65.600	WBGene00016808	C50D2.5	91	65.600	Caenorhabditis_elegans
ENSCSEG00000019017	sf3b6	100	97.600	ENSCJAG00000007716	SF3B6	100	97.600	Callithrix_jacchus
ENSCSEG00000019017	sf3b6	100	97.600	ENSCAFG00000003957	SF3B6	100	97.600	Canis_familiaris
ENSCSEG00000019017	sf3b6	100	97.600	ENSCAFG00020025576	SF3B6	100	97.600	Canis_lupus_dingo
ENSCSEG00000019017	sf3b6	100	97.600	ENSCHIG00000009902	SF3B6	100	97.600	Capra_hircus
ENSCSEG00000019017	sf3b6	100	97.600	ENSTSYG00000013978	SF3B6	100	97.600	Carlito_syrichta
ENSCSEG00000019017	sf3b6	97	94.215	ENSCAPG00000016302	SF3B6	99	94.215	Cavia_aperea
ENSCSEG00000019017	sf3b6	100	97.600	ENSCPOG00000008016	SF3B6	100	97.600	Cavia_porcellus
ENSCSEG00000019017	sf3b6	100	97.600	ENSCCAG00000036653	SF3B6	100	97.600	Cebus_capucinus
ENSCSEG00000019017	sf3b6	99	91.935	ENSCCAG00000018894	-	96	91.935	Cebus_capucinus
ENSCSEG00000019017	sf3b6	100	97.600	ENSCATG00000030936	SF3B6	100	97.600	Cercocebus_atys
ENSCSEG00000019017	sf3b6	100	97.600	ENSCLAG00000014512	SF3B6	100	97.600	Chinchilla_lanigera
ENSCSEG00000019017	sf3b6	100	97.600	ENSCSAG00000008390	SF3B6	100	97.600	Chlorocebus_sabaeus
ENSCSEG00000019017	sf3b6	99	71.774	ENSCHOG00000013886	-	99	71.774	Choloepus_hoffmanni
ENSCSEG00000019017	sf3b6	100	97.600	ENSCHOG00000000689	SF3B6	100	97.600	Choloepus_hoffmanni
ENSCSEG00000019017	sf3b6	100	97.600	ENSCPBG00000020042	SF3B6	100	97.600	Chrysemys_picta_bellii
ENSCSEG00000019017	sf3b6	98	80.488	ENSCING00000012689	-	97	80.488	Ciona_intestinalis
ENSCSEG00000019017	sf3b6	100	97.600	ENSCANG00000030559	SF3B6	100	97.600	Colobus_angolensis_palliatus
ENSCSEG00000019017	sf3b6	100	97.600	ENSCGRG00001014595	Sf3b6	100	97.600	Cricetulus_griseus_chok1gshd
ENSCSEG00000019017	sf3b6	100	97.600	ENSCGRG00000005272	Sf3b6	100	97.600	Cricetulus_griseus_crigri
ENSCSEG00000019017	sf3b6	100	98.400	ENSCVAG00000005055	sf3b6	100	98.400	Cyprinodon_variegatus
ENSCSEG00000019017	sf3b6	100	97.600	ENSDARG00000009753	sf3b6	100	97.600	Danio_rerio
ENSCSEG00000019017	sf3b6	100	97.600	ENSDNOG00000007148	SF3B6	100	97.600	Dasypus_novemcinctus
ENSCSEG00000019017	sf3b6	99	80.159	ENSDORG00000029761	-	98	80.159	Dipodomys_ordii
ENSCSEG00000019017	sf3b6	100	97.600	ENSDORG00000009772	Sf3b6	100	97.600	Dipodomys_ordii
ENSCSEG00000019017	sf3b6	99	80.159	ENSDORG00000027390	-	98	80.159	Dipodomys_ordii
ENSCSEG00000019017	sf3b6	92	76.522	FBgn0035692	Sf3b6	95	76.522	Drosophila_melanogaster
ENSCSEG00000019017	sf3b6	92	91.304	ENSEBUG00000004424	sf3b6	91	91.304	Eptatretus_burgeri
ENSCSEG00000019017	sf3b6	100	86.400	ENSEASG00005008061	-	100	86.400	Equus_asinus_asinus
ENSCSEG00000019017	sf3b6	100	97.600	ENSEASG00005009993	SF3B6	100	97.600	Equus_asinus_asinus
ENSCSEG00000019017	sf3b6	81	93.069	ENSECAG00000015618	SF3B6	93	93.069	Equus_caballus
ENSCSEG00000019017	sf3b6	79	83.838	ENSECAG00000027755	-	85	83.838	Equus_caballus
ENSCSEG00000019017	sf3b6	100	99.200	ENSELUG00000010379	sf3b6	100	99.200	Esox_lucius
ENSCSEG00000019017	sf3b6	100	97.600	ENSFCAG00000031365	SF3B6	100	97.600	Felis_catus
ENSCSEG00000019017	sf3b6	100	97.600	ENSFALG00000001651	SF3B6	100	97.600	Ficedula_albicollis
ENSCSEG00000019017	sf3b6	100	97.600	ENSFDAG00000007864	SF3B6	100	97.600	Fukomys_damarensis
ENSCSEG00000019017	sf3b6	100	98.400	ENSFHEG00000000685	sf3b6	100	98.400	Fundulus_heteroclitus
ENSCSEG00000019017	sf3b6	100	98.400	ENSGMOG00000005123	sf3b6	100	98.400	Gadus_morhua
ENSCSEG00000019017	sf3b6	73	97.802	ENSGALG00000016501	SF3B6	100	97.802	Gallus_gallus
ENSCSEG00000019017	sf3b6	100	99.200	ENSGAFG00000009334	sf3b6	100	99.200	Gambusia_affinis
ENSCSEG00000019017	sf3b6	100	100.000	ENSGACG00000004803	sf3b6	100	100.000	Gasterosteus_aculeatus
ENSCSEG00000019017	sf3b6	100	97.600	ENSGAGG00000012240	SF3B6	100	97.600	Gopherus_agassizii
ENSCSEG00000019017	sf3b6	100	97.600	ENSGGOG00000040806	SF3B6	100	97.600	Gorilla_gorilla
ENSCSEG00000019017	sf3b6	100	99.200	ENSHBUG00000012556	sf3b6	100	99.200	Haplochromis_burtoni
ENSCSEG00000019017	sf3b6	100	97.600	ENSHGLG00000014895	SF3B14	100	97.600	Heterocephalus_glaber_female
ENSCSEG00000019017	sf3b6	100	97.600	ENSHGLG00100008639	SF3B14	100	97.600	Heterocephalus_glaber_male
ENSCSEG00000019017	sf3b6	100	98.400	ENSHCOG00000019962	sf3b6	100	98.400	Hippocampus_comes
ENSCSEG00000019017	sf3b6	100	97.600	ENSIPUG00000023800	sf3b6	100	97.600	Ictalurus_punctatus
ENSCSEG00000019017	sf3b6	100	97.600	ENSJJAG00000021819	Sf3b6	100	97.600	Jaculus_jaculus
ENSCSEG00000019017	sf3b6	100	99.200	ENSKMAG00000004000	sf3b6	100	99.200	Kryptolebias_marmoratus
ENSCSEG00000019017	sf3b6	100	99.200	ENSLBEG00000022937	sf3b6	100	99.200	Labrus_bergylta
ENSCSEG00000019017	sf3b6	100	97.600	ENSLACG00000014326	SF3B6	100	97.600	Latimeria_chalumnae
ENSCSEG00000019017	sf3b6	100	97.600	ENSLOCG00000016481	sf3b6	100	97.600	Lepisosteus_oculatus
ENSCSEG00000019017	sf3b6	100	97.600	ENSLAFG00000029423	SF3B6	100	97.600	Loxodonta_africana
ENSCSEG00000019017	sf3b6	100	97.600	ENSMFAG00000038178	SF3B6	100	97.600	Macaca_fascicularis
ENSCSEG00000019017	sf3b6	100	97.600	ENSMMUG00000001282	SF3B6	100	97.600	Macaca_mulatta
ENSCSEG00000019017	sf3b6	100	97.600	ENSMNEG00000029050	SF3B6	100	97.600	Macaca_nemestrina
ENSCSEG00000019017	sf3b6	100	97.600	ENSMLEG00000019896	SF3B6	100	97.600	Mandrillus_leucophaeus
ENSCSEG00000019017	sf3b6	78	97.938	ENSMAMG00000007713	sf3b6	88	97.938	Mastacembelus_armatus
ENSCSEG00000019017	sf3b6	100	99.200	ENSMZEG00005003557	sf3b6	100	99.200	Maylandia_zebra
ENSCSEG00000019017	sf3b6	100	97.600	ENSMGAG00000014057	SF3B6	100	97.600	Meleagris_gallopavo
ENSCSEG00000019017	sf3b6	100	97.600	ENSMAUG00000000586	-	100	97.600	Mesocricetus_auratus
ENSCSEG00000019017	sf3b6	100	97.600	ENSMICG00000032874	SF3B6	100	97.600	Microcebus_murinus
ENSCSEG00000019017	sf3b6	100	97.600	ENSMOCG00000014338	Sf3b6	100	97.600	Microtus_ochrogaster
ENSCSEG00000019017	sf3b6	100	98.400	ENSMMOG00000015653	sf3b6	100	98.400	Mola_mola
ENSCSEG00000019017	sf3b6	100	90.400	ENSMODG00000002144	SF3B6	100	90.400	Monodelphis_domestica
ENSCSEG00000019017	sf3b6	100	98.400	ENSMALG00000019642	sf3b6	67	98.400	Monopterus_albus
ENSCSEG00000019017	sf3b6	100	97.600	MGP_CAROLIEiJ_G0017590	Sf3b6	100	97.600	Mus_caroli
ENSCSEG00000019017	sf3b6	100	97.600	ENSMUSG00000037361	Sf3b6	100	97.600	Mus_musculus
ENSCSEG00000019017	sf3b6	100	97.600	MGP_PahariEiJ_G0029348	Sf3b6	100	97.600	Mus_pahari
ENSCSEG00000019017	sf3b6	100	97.600	MGP_SPRETEiJ_G0018434	Sf3b6	100	97.600	Mus_spretus
ENSCSEG00000019017	sf3b6	100	97.600	ENSMPUG00000013957	SF3B6	100	97.600	Mustela_putorius_furo
ENSCSEG00000019017	sf3b6	100	96.000	ENSMLUG00000002473	SF3B6	100	96.000	Myotis_lucifugus
ENSCSEG00000019017	sf3b6	100	97.600	ENSNGAG00000020256	Sf3b6	100	97.600	Nannospalax_galili
ENSCSEG00000019017	sf3b6	100	99.200	ENSNBRG00000018244	sf3b6	100	99.200	Neolamprologus_brichardi
ENSCSEG00000019017	sf3b6	100	97.600	ENSNLEG00000000815	-	100	97.600	Nomascus_leucogenys
ENSCSEG00000019017	sf3b6	87	97.248	ENSODEG00000009547	SF3B6	92	97.248	Octodon_degus
ENSCSEG00000019017	sf3b6	100	99.200	ENSONIG00000001219	sf3b6	100	99.200	Oreochromis_niloticus
ENSCSEG00000019017	sf3b6	100	97.600	ENSOANG00000007627	SF3B6	100	97.600	Ornithorhynchus_anatinus
ENSCSEG00000019017	sf3b6	100	97.600	ENSOCUG00000022008	SF3B6	100	97.600	Oryctolagus_cuniculus
ENSCSEG00000019017	sf3b6	100	99.200	ENSORLG00000015955	sf3b6	100	99.200	Oryzias_latipes
ENSCSEG00000019017	sf3b6	100	99.200	ENSORLG00020005875	sf3b6	100	99.200	Oryzias_latipes_hni
ENSCSEG00000019017	sf3b6	100	99.200	ENSORLG00015001347	sf3b6	100	99.200	Oryzias_latipes_hsok
ENSCSEG00000019017	sf3b6	100	97.600	ENSOMEG00000014506	sf3b6	100	97.600	Oryzias_melastigma
ENSCSEG00000019017	sf3b6	100	97.600	ENSOGAG00000004468	SF3B6	100	97.600	Otolemur_garnettii
ENSCSEG00000019017	sf3b6	100	97.600	ENSOARG00000017819	SF3B6	100	97.600	Ovis_aries
ENSCSEG00000019017	sf3b6	100	97.600	ENSPPAG00000027816	SF3B6	100	97.600	Pan_paniscus
ENSCSEG00000019017	sf3b6	100	97.600	ENSPPRG00000023257	SF3B6	100	97.600	Panthera_pardus
ENSCSEG00000019017	sf3b6	100	97.600	ENSPTIG00000013322	SF3B6	100	97.600	Panthera_tigris_altaica
ENSCSEG00000019017	sf3b6	100	97.600	ENSPTRG00000011709	SF3B6	100	97.600	Pan_troglodytes
ENSCSEG00000019017	sf3b6	100	97.600	ENSPANG00000021963	SF3B6	100	97.600	Papio_anubis
ENSCSEG00000019017	sf3b6	100	97.600	ENSPKIG00000012311	sf3b6	100	97.600	Paramormyrops_kingsleyae
ENSCSEG00000019017	sf3b6	92	97.391	ENSPSIG00000017115	SF3B6	100	97.391	Pelodiscus_sinensis
ENSCSEG00000019017	sf3b6	78	95.876	ENSPMGG00000014621	sf3b6	81	95.876	Periophthalmus_magnuspinnatus
ENSCSEG00000019017	sf3b6	100	97.600	ENSPEMG00000010308	Sf3b6	100	97.600	Peromyscus_maniculatus_bairdii
ENSCSEG00000019017	sf3b6	94	88.983	ENSPMAG00000006008	sf3b6	94	88.983	Petromyzon_marinus
ENSCSEG00000019017	sf3b6	100	97.600	ENSPCIG00000022128	-	100	97.600	Phascolarctos_cinereus
ENSCSEG00000019017	sf3b6	99	75.806	ENSPCIG00000015858	-	99	75.806	Phascolarctos_cinereus
ENSCSEG00000019017	sf3b6	100	99.200	ENSPFOG00000012494	sf3b6	100	99.200	Poecilia_formosa
ENSCSEG00000019017	sf3b6	100	99.200	ENSPLAG00000020460	sf3b6	100	99.200	Poecilia_latipinna
ENSCSEG00000019017	sf3b6	100	99.200	ENSPMEG00000004426	sf3b6	100	99.200	Poecilia_mexicana
ENSCSEG00000019017	sf3b6	100	97.600	ENSPPYG00000012603	SF3B6	100	97.600	Pongo_abelii
ENSCSEG00000019017	sf3b6	100	97.600	ENSPVAG00000011346	SF3B6	100	97.600	Pteropus_vampyrus
ENSCSEG00000019017	sf3b6	100	99.200	ENSPNYG00000021832	sf3b6	100	99.200	Pundamilia_nyererei
ENSCSEG00000019017	sf3b6	100	97.600	ENSPNAG00000008845	sf3b6	100	97.600	Pygocentrus_nattereri
ENSCSEG00000019017	sf3b6	100	82.400	ENSRNOG00000046172	Sf3b6	100	82.400	Rattus_norvegicus
ENSCSEG00000019017	sf3b6	100	97.600	ENSRBIG00000039598	SF3B6	100	97.600	Rhinopithecus_bieti
ENSCSEG00000019017	sf3b6	100	97.600	ENSRROG00000011368	SF3B6	100	97.600	Rhinopithecus_roxellana
ENSCSEG00000019017	sf3b6	100	97.600	ENSSBOG00000002914	SF3B6	100	97.600	Saimiri_boliviensis_boliviensis
ENSCSEG00000019017	sf3b6	100	97.600	ENSSFOG00015014370	sf3b6	100	97.600	Scleropages_formosus
ENSCSEG00000019017	sf3b6	100	99.200	ENSSMAG00000004566	sf3b6	100	99.200	Scophthalmus_maximus
ENSCSEG00000019017	sf3b6	100	99.200	ENSSDUG00000006538	sf3b6	100	99.200	Seriola_dumerili
ENSCSEG00000019017	sf3b6	100	99.200	ENSSLDG00000004494	sf3b6	100	99.200	Seriola_lalandi_dorsalis
ENSCSEG00000019017	sf3b6	100	97.600	ENSSARG00000011902	-	100	97.600	Sorex_araneus
ENSCSEG00000019017	sf3b6	100	97.600	ENSSPUG00000014919	SF3B6	100	97.600	Sphenodon_punctatus
ENSCSEG00000019017	sf3b6	100	99.200	ENSSPAG00000013201	sf3b6	100	99.200	Stegastes_partitus
ENSCSEG00000019017	sf3b6	100	97.600	ENSSSCG00000008587	SF3B6	100	97.600	Sus_scrofa
ENSCSEG00000019017	sf3b6	100	97.600	ENSTGUG00000013191	SF3B6	100	97.600	Taeniopygia_guttata
ENSCSEG00000019017	sf3b6	100	99.200	ENSTRUG00000025286	sf3b6	100	99.200	Takifugu_rubripes
ENSCSEG00000019017	sf3b6	100	99.200	ENSTNIG00000009719	sf3b6	100	99.200	Tetraodon_nigroviridis
ENSCSEG00000019017	sf3b6	92	97.391	ENSTBEG00000012532	SF3B6	100	97.391	Tupaia_belangeri
ENSCSEG00000019017	sf3b6	92	97.391	ENSTTRG00000013430	SF3B6	100	97.391	Tursiops_truncatus
ENSCSEG00000019017	sf3b6	100	79.365	ENSUAMG00000000978	-	100	79.365	Ursus_americanus
ENSCSEG00000019017	sf3b6	100	97.600	ENSUAMG00000025329	SF3B6	100	97.600	Ursus_americanus
ENSCSEG00000019017	sf3b6	100	97.600	ENSUMAG00000022835	SF3B6	100	97.600	Ursus_maritimus
ENSCSEG00000019017	sf3b6	92	97.391	ENSVPAG00000005546	SF3B6	100	97.391	Vicugna_pacos
ENSCSEG00000019017	sf3b6	100	97.600	ENSVVUG00000010874	SF3B6	100	97.600	Vulpes_vulpes
ENSCSEG00000019017	sf3b6	100	96.800	ENSXETG00000018204	sf3b6	100	96.800	Xenopus_tropicalis
ENSCSEG00000019017	sf3b6	86	86.726	ENSXCOG00000008477	sf3b6	88	86.726	Xiphophorus_couchianus
ENSCSEG00000019017	sf3b6	100	99.200	ENSXMAG00000010747	sf3b6	100	99.200	Xiphophorus_maculatus