EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000019075 (Gene tree)
Gene ID: 103387894
Gene Symbol: yrdc
Alias: zgc:162301
Full Name: yrdC N6-threonylcarbamoyltransferase domain containing
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 24604 bases
Position: chr13:905353-929956
Accession: 103387894
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000029765	Sua5_yciO_yrdC	PF01300.18	2.4e-50	1	1
ENSCSEP00000029772	Sua5_yciO_yrdC	PF01300.18	2.4e-50	1	1
ENSCSEP00000029773	Sua5_yciO_yrdC	PF01300.18	2.4e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000030174	-	3708	-	ENSCSEP00000029772	272 (aa)	-	UPI0004975906
ENSCSET00000030167	-	2430	XM_008322699	ENSCSEP00000029765	272 (aa)	XP_008320921	UPI0004975906
ENSCSET00000030175	-	3708	-	ENSCSEP00000029773	272 (aa)	-	UPI0004975906

Gene Model

Click here to download ENSCSEG00000019075's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000019075's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000019075	yrdc	75	63.158	ENSG00000196449	YRDC	75	63.158	Homo_sapiens
ENSCSEG00000019075	yrdc	91	71.591	ENSAPOG00000024293	yrdc	98	71.591	Acanthochromis_polyacanthus
ENSCSEG00000019075	yrdc	66	64.481	ENSAMEG00000001173	YRDC	97	64.481	Ailuropoda_melanoleuca
ENSCSEG00000019075	yrdc	96	69.084	ENSACIG00000017330	yrdc	93	69.084	Amphilophus_citrinellus
ENSCSEG00000019075	yrdc	91	74.806	ENSAOCG00000021647	yrdc	98	74.806	Amphiprion_ocellaris
ENSCSEG00000019075	yrdc	91	74.806	ENSAPEG00000006164	yrdc	98	74.806	Amphiprion_percula
ENSCSEG00000019075	yrdc	94	71.206	ENSATEG00000010086	yrdc	92	71.206	Anabas_testudineus
ENSCSEG00000019075	yrdc	70	60.825	ENSACAG00000017203	YRDC	93	60.914	Anolis_carolinensis
ENSCSEG00000019075	yrdc	73	62.871	ENSANAG00000028788	-	86	62.871	Aotus_nancymaae
ENSCSEG00000019075	yrdc	74	59.709	ENSANAG00000031052	-	75	59.709	Aotus_nancymaae
ENSCSEG00000019075	yrdc	95	70.930	ENSACLG00000027775	yrdc	92	70.930	Astatotilapia_calliptera
ENSCSEG00000019075	yrdc	96	63.100	ENSAMXG00000037791	yrdc	94	63.100	Astyanax_mexicanus
ENSCSEG00000019075	yrdc	98	52.727	ENSBTAG00000006510	YRDC	97	52.727	Bos_taurus
ENSCSEG00000019075	yrdc	74	35.961	WBGene00012997	Y48C3A.18	93	36.607	Caenorhabditis_elegans
ENSCSEG00000019075	yrdc	75	62.679	ENSCJAG00000002078	YRDC	58	62.679	Callithrix_jacchus
ENSCSEG00000019075	yrdc	75	60.766	ENSCAFG00000003253	YRDC	76	60.766	Canis_familiaris
ENSCSEG00000019075	yrdc	75	61.722	ENSCAFG00020007843	YRDC	76	61.722	Canis_lupus_dingo
ENSCSEG00000019075	yrdc	87	56.911	ENSCHIG00000007882	YRDC	88	56.911	Capra_hircus
ENSCSEG00000019075	yrdc	61	63.529	ENSTSYG00000005555	YRDC	61	63.529	Carlito_syrichta
ENSCSEG00000019075	yrdc	74	64.390	ENSCPOG00000036144	YRDC	73	64.390	Cavia_porcellus
ENSCSEG00000019075	yrdc	75	62.679	ENSCCAG00000028891	YRDC	75	62.679	Cebus_capucinus
ENSCSEG00000019075	yrdc	75	61.244	ENSCATG00000036928	YRDC	75	62.679	Cercocebus_atys
ENSCSEG00000019075	yrdc	70	62.564	ENSCLAG00000015012	YRDC	76	59.906	Chinchilla_lanigera
ENSCSEG00000019075	yrdc	75	61.244	ENSCSAG00000001116	YRDC	75	62.679	Chlorocebus_sabaeus
ENSCSEG00000019075	yrdc	54	60.959	ENSCHOG00000005500	YRDC	70	60.959	Choloepus_hoffmanni
ENSCSEG00000019075	yrdc	75	66.346	ENSCPBG00000018446	YRDC	89	66.346	Chrysemys_picta_bellii
ENSCSEG00000019075	yrdc	74	49.524	ENSCING00000007564	-	98	49.524	Ciona_intestinalis
ENSCSEG00000019075	yrdc	74	49.048	ENSCSAVG00000009982	-	98	49.048	Ciona_savignyi
ENSCSEG00000019075	yrdc	75	61.244	ENSCANG00000031111	YRDC	75	62.679	Colobus_angolensis_palliatus
ENSCSEG00000019075	yrdc	75	61.722	ENSCGRG00001014496	-	75	61.722	Cricetulus_griseus_chok1gshd
ENSCSEG00000019075	yrdc	75	56.459	ENSCGRG00001000829	-	58	56.459	Cricetulus_griseus_chok1gshd
ENSCSEG00000019075	yrdc	85	74.348	ENSCVAG00000017355	yrdc	84	74.348	Cyprinodon_variegatus
ENSCSEG00000019075	yrdc	76	74.757	ENSDARG00000041428	yrdc	88	74.757	Danio_rerio
ENSCSEG00000019075	yrdc	69	47.938	ENSDNOG00000036198	-	94	47.938	Dasypus_novemcinctus
ENSCSEG00000019075	yrdc	75	60.766	ENSDNOG00000038789	-	75	61.658	Dasypus_novemcinctus
ENSCSEG00000019075	yrdc	68	64.550	ENSDORG00000008788	Yrdc	84	64.550	Dipodomys_ordii
ENSCSEG00000019075	yrdc	76	47.393	FBgn0061361	CG33786	85	47.393	Drosophila_melanogaster
ENSCSEG00000019075	yrdc	75	46.411	ENSETEG00000003442	YRDC	75	46.411	Echinops_telfairi
ENSCSEG00000019075	yrdc	85	51.293	ENSEBUG00000014080	yrdc	92	51.293	Eptatretus_burgeri
ENSCSEG00000019075	yrdc	75	63.158	ENSEASG00005012253	YRDC	75	63.158	Equus_asinus_asinus
ENSCSEG00000019075	yrdc	75	63.158	ENSECAG00000022522	YRDC	75	63.158	Equus_caballus
ENSCSEG00000019075	yrdc	81	76.818	ENSELUG00000018071	yrdc	72	76.818	Esox_lucius
ENSCSEG00000019075	yrdc	75	61.722	ENSFCAG00000011018	YRDC	75	61.722	Felis_catus
ENSCSEG00000019075	yrdc	69	31.034	ENSFALG00000011333	-	53	31.034	Ficedula_albicollis
ENSCSEG00000019075	yrdc	69	67.358	ENSFALG00000000964	YRDC	89	66.837	Ficedula_albicollis
ENSCSEG00000019075	yrdc	94	68.093	ENSFHEG00000001029	yrdc	92	67.782	Fundulus_heteroclitus
ENSCSEG00000019075	yrdc	76	80.583	ENSGMOG00000015635	yrdc	100	80.583	Gadus_morhua
ENSCSEG00000019075	yrdc	67	32.653	ENSGALG00000025899	-	65	32.653	Gallus_gallus
ENSCSEG00000019075	yrdc	84	61.864	ENSGALG00000029001	YRDC	92	61.864	Gallus_gallus
ENSCSEG00000019075	yrdc	95	69.112	ENSGAFG00000008396	yrdc	93	69.112	Gambusia_affinis
ENSCSEG00000019075	yrdc	81	76.786	ENSGACG00000013878	yrdc	86	82.039	Gasterosteus_aculeatus
ENSCSEG00000019075	yrdc	81	64.602	ENSGAGG00000014968	YRDC	98	64.602	Gopherus_agassizii
ENSCSEG00000019075	yrdc	75	63.158	ENSGGOG00000007619	YRDC	75	63.158	Gorilla_gorilla
ENSCSEG00000019075	yrdc	95	69.767	ENSHBUG00000009298	yrdc	92	69.767	Haplochromis_burtoni
ENSCSEG00000019075	yrdc	75	61.722	ENSHGLG00000014075	YRDC	75	61.722	Heterocephalus_glaber_female
ENSCSEG00000019075	yrdc	73	62.376	ENSHGLG00100002734	YRDC	73	62.376	Heterocephalus_glaber_male
ENSCSEG00000019075	yrdc	74	74.752	ENSHCOG00000006598	yrdc	80	74.752	Hippocampus_comes
ENSCSEG00000019075	yrdc	79	74.074	ENSIPUG00000014985	yrdc	89	74.074	Ictalurus_punctatus
ENSCSEG00000019075	yrdc	98	52.878	ENSSTOG00000001643	YRDC	97	52.878	Ictidomys_tridecemlineatus
ENSCSEG00000019075	yrdc	95	69.231	ENSKMAG00000013468	yrdc	93	69.231	Kryptolebias_marmoratus
ENSCSEG00000019075	yrdc	94	72.374	ENSLBEG00000027501	yrdc	92	72.374	Labrus_bergylta
ENSCSEG00000019075	yrdc	94	56.107	ENSLACG00000010689	YRDC	94	66.176	Latimeria_chalumnae
ENSCSEG00000019075	yrdc	69	32.338	ENSLACG00000017624	si:ch211-153b23.3	61	32.338	Latimeria_chalumnae
ENSCSEG00000019075	yrdc	82	65.086	ENSLOCG00000003321	yrdc	95	65.086	Lepisosteus_oculatus
ENSCSEG00000019075	yrdc	75	61.244	ENSLAFG00000017556	YRDC	75	61.244	Loxodonta_africana
ENSCSEG00000019075	yrdc	74	61.765	ENSMFAG00000003487	YRDC	96	63.235	Macaca_fascicularis
ENSCSEG00000019075	yrdc	75	61.244	ENSMMUG00000005372	YRDC	56	62.679	Macaca_mulatta
ENSCSEG00000019075	yrdc	75	61.244	ENSMNEG00000029348	YRDC	75	62.679	Macaca_nemestrina
ENSCSEG00000019075	yrdc	51	65.734	ENSMLEG00000041122	YRDC	95	67.832	Mandrillus_leucophaeus
ENSCSEG00000019075	yrdc	95	71.429	ENSMAMG00000007315	yrdc	93	71.429	Mastacembelus_armatus
ENSCSEG00000019075	yrdc	95	70.930	ENSMZEG00005006948	yrdc	92	70.930	Maylandia_zebra
ENSCSEG00000019075	yrdc	67	32.653	ENSMGAG00000005489	-	51	32.653	Meleagris_gallopavo
ENSCSEG00000019075	yrdc	73	68.317	ENSMGAG00000002833	YRDC	99	68.317	Meleagris_gallopavo
ENSCSEG00000019075	yrdc	75	62.679	ENSMICG00000031688	YRDC	75	62.679	Microcebus_murinus
ENSCSEG00000019075	yrdc	54	58.904	ENSMOCG00000000164	-	57	58.904	Microtus_ochrogaster
ENSCSEG00000019075	yrdc	96	69.615	ENSMMOG00000002119	yrdc	93	69.615	Mola_mola
ENSCSEG00000019075	yrdc	75	61.836	ENSMODG00000017750	YRDC	74	61.836	Monodelphis_domestica
ENSCSEG00000019075	yrdc	89	71.260	ENSMALG00000012471	yrdc	98	71.260	Monopterus_albus
ENSCSEG00000019075	yrdc	69	63.212	MGP_CAROLIEiJ_G0026453	Yrdc	97	69.608	Mus_caroli
ENSCSEG00000019075	yrdc	75	61.722	ENSMUSG00000028889	Yrdc	99	70.192	Mus_musculus
ENSCSEG00000019075	yrdc	75	62.201	MGP_PahariEiJ_G0028784	Yrdc	99	70.192	Mus_pahari
ENSCSEG00000019075	yrdc	75	61.722	MGP_SPRETEiJ_G0027432	Yrdc	75	61.722	Mus_spretus
ENSCSEG00000019075	yrdc	73	62.871	ENSMPUG00000014542	YRDC	81	62.871	Mustela_putorius_furo
ENSCSEG00000019075	yrdc	71	59.391	ENSMLUG00000024310	-	97	59.391	Myotis_lucifugus
ENSCSEG00000019075	yrdc	77	62.150	ENSMLUG00000000955	-	76	62.150	Myotis_lucifugus
ENSCSEG00000019075	yrdc	75	52.153	ENSMLUG00000028796	-	74	52.153	Myotis_lucifugus
ENSCSEG00000019075	yrdc	75	61.836	ENSNGAG00000019099	Yrdc	74	61.836	Nannospalax_galili
ENSCSEG00000019075	yrdc	95	70.543	ENSNBRG00000009475	yrdc	93	70.543	Neolamprologus_brichardi
ENSCSEG00000019075	yrdc	75	63.158	ENSNLEG00000011665	YRDC	75	63.158	Nomascus_leucogenys
ENSCSEG00000019075	yrdc	76	62.441	ENSMEUG00000005068	YRDC	99	62.441	Notamacropus_eugenii
ENSCSEG00000019075	yrdc	74	62.745	ENSODEG00000007401	YRDC	100	68.571	Octodon_degus
ENSCSEG00000019075	yrdc	76	83.981	ENSONIG00000016213	yrdc	87	83.981	Oreochromis_niloticus
ENSCSEG00000019075	yrdc	76	62.736	ENSOCUG00000005384	YRDC	72	62.736	Oryctolagus_cuniculus
ENSCSEG00000019075	yrdc	75	79.803	ENSORLG00000014393	yrdc	77	79.803	Oryzias_latipes
ENSCSEG00000019075	yrdc	75	79.310	ENSORLG00020019663	yrdc	77	79.310	Oryzias_latipes_hni
ENSCSEG00000019075	yrdc	74	79.208	ENSORLG00015004625	yrdc	77	79.208	Oryzias_latipes_hsok
ENSCSEG00000019075	yrdc	75	80.788	ENSOMEG00000018550	yrdc	78	80.788	Oryzias_melastigma
ENSCSEG00000019075	yrdc	75	60.766	ENSOGAG00000030474	YRDC	76	60.766	Otolemur_garnettii
ENSCSEG00000019075	yrdc	75	62.201	ENSOARG00000019873	YRDC	75	62.201	Ovis_aries
ENSCSEG00000019075	yrdc	50	68.085	ENSPPAG00000039722	-	95	68.085	Pan_paniscus
ENSCSEG00000019075	yrdc	75	61.722	ENSPPRG00000007752	YRDC	75	61.722	Panthera_pardus
ENSCSEG00000019075	yrdc	53	63.333	ENSPTIG00000019821	YRDC	64	63.333	Panthera_tigris_altaica
ENSCSEG00000019075	yrdc	75	63.158	ENSPTRG00000000557	YRDC	75	63.158	Pan_troglodytes
ENSCSEG00000019075	yrdc	75	61.244	ENSPANG00000006487	YRDC	56	62.679	Papio_anubis
ENSCSEG00000019075	yrdc	92	66.275	ENSPKIG00000004574	yrdc	91	66.275	Paramormyrops_kingsleyae
ENSCSEG00000019075	yrdc	74	66.829	ENSPSIG00000006483	YRDC	72	66.829	Pelodiscus_sinensis
ENSCSEG00000019075	yrdc	91	70.161	ENSPMGG00000004184	yrdc	80	80.000	Periophthalmus_magnuspinnatus
ENSCSEG00000019075	yrdc	62	61.628	ENSPEMG00000016985	Yrdc	75	61.628	Peromyscus_maniculatus_bairdii
ENSCSEG00000019075	yrdc	63	56.497	ENSPMAG00000002905	yrdc	96	56.497	Petromyzon_marinus
ENSCSEG00000019075	yrdc	78	60.930	ENSPCIG00000025731	YRDC	75	63.131	Phascolarctos_cinereus
ENSCSEG00000019075	yrdc	95	67.568	ENSPFOG00000023097	yrdc	93	67.568	Poecilia_formosa
ENSCSEG00000019075	yrdc	79	78.241	ENSPLAG00000020882	yrdc	81	78.241	Poecilia_latipinna
ENSCSEG00000019075	yrdc	79	77.778	ENSPMEG00000013237	yrdc	82	77.778	Poecilia_mexicana
ENSCSEG00000019075	yrdc	79	78.704	ENSPREG00000005285	yrdc	81	78.704	Poecilia_reticulata
ENSCSEG00000019075	yrdc	84	58.403	ENSPPYG00000001523	-	95	58.403	Pongo_abelii
ENSCSEG00000019075	yrdc	77	60.563	ENSPCAG00000016850	YRDC	76	60.563	Procavia_capensis
ENSCSEG00000019075	yrdc	75	62.679	ENSPCOG00000013214	YRDC	75	62.679	Propithecus_coquereli
ENSCSEG00000019075	yrdc	98	53.597	ENSPVAG00000010147	YRDC	97	53.597	Pteropus_vampyrus
ENSCSEG00000019075	yrdc	95	70.155	ENSPNYG00000013956	yrdc	92	70.155	Pundamilia_nyererei
ENSCSEG00000019075	yrdc	82	69.955	ENSPNAG00000015625	yrdc	88	69.955	Pygocentrus_nattereri
ENSCSEG00000019075	yrdc	75	61.244	ENSRNOG00000025424	Yrdc	75	61.244	Rattus_norvegicus
ENSCSEG00000019075	yrdc	75	61.244	ENSRBIG00000032289	YRDC	75	62.679	Rhinopithecus_bieti
ENSCSEG00000019075	yrdc	88	54.839	ENSRROG00000039370	YRDC	84	56.048	Rhinopithecus_roxellana
ENSCSEG00000019075	yrdc	78	60.648	ENSSBOG00000018937	YRDC	92	60.648	Saimiri_boliviensis_boliviensis
ENSCSEG00000019075	yrdc	51	65.278	ENSSHAG00000013957	-	97	65.278	Sarcophilus_harrisii
ENSCSEG00000019075	yrdc	75	72.596	ENSSFOG00015006128	yrdc	89	72.596	Scleropages_formosus
ENSCSEG00000019075	yrdc	80	79.263	ENSSMAG00000005195	yrdc	83	79.263	Scophthalmus_maximus
ENSCSEG00000019075	yrdc	51	34.459	ENSSDUG00000006736	-	75	34.459	Seriola_dumerili
ENSCSEG00000019075	yrdc	95	69.767	ENSSDUG00000009775	yrdc	93	69.767	Seriola_dumerili
ENSCSEG00000019075	yrdc	95	69.767	ENSSLDG00000003196	yrdc	93	69.767	Seriola_lalandi_dorsalis
ENSCSEG00000019075	yrdc	79	63.303	ENSSPUG00000003946	YRDC	84	63.303	Sphenodon_punctatus
ENSCSEG00000019075	yrdc	91	70.881	ENSSPAG00000012559	yrdc	98	70.881	Stegastes_partitus
ENSCSEG00000019075	yrdc	75	63.636	ENSSSCG00000040425	YRDC	75	63.636	Sus_scrofa
ENSCSEG00000019075	yrdc	52	69.178	ENSTGUG00000001507	YRDC	99	69.178	Taeniopygia_guttata
ENSCSEG00000019075	yrdc	95	65.504	ENSTRUG00000005923	yrdc	93	65.385	Takifugu_rubripes
ENSCSEG00000019075	yrdc	55	64.286	ENSTBEG00000008863	YRDC	98	64.286	Tupaia_belangeri
ENSCSEG00000019075	yrdc	50	67.376	ENSTTRG00000013538	-	95	67.376	Tursiops_truncatus
ENSCSEG00000019075	yrdc	72	64.824	ENSUAMG00000006150	YRDC	98	64.824	Ursus_americanus
ENSCSEG00000019075	yrdc	75	48.325	ENSVPAG00000006642	YRDC	89	48.325	Vicugna_pacos
ENSCSEG00000019075	yrdc	76	67.773	ENSXETG00000014420	yrdc	89	67.773	Xenopus_tropicalis
ENSCSEG00000019075	yrdc	79	78.241	ENSXCOG00000000829	yrdc	91	78.241	Xiphophorus_couchianus
ENSCSEG00000019075	yrdc	95	68.340	ENSXMAG00000014606	yrdc	88	68.340	Xiphophorus_maculatus