EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000019183 (Gene tree)
Gene ID: 103387884
Gene Symbol: si:dkey-34d22.5
Alias: -
Full Name: ras-related protein Rab-39A
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 803 bases
Position: chr13:1171589-1172391
Accession: 103387884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000029923	MMR_HSR1	PF01926.23	4.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000030326	-	669	XM_008322687	ENSCSEP00000029923	222 (aa)	XP_008320909	UPI000495457E

Gene Model

Click here to download ENSCSEG00000019183's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000019183's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000019183	si:dkey-34d22.5	79	36.111	ENSCSEG00000002970	RAB7A	78	36.111
ENSCSEG00000019183	si:dkey-34d22.5	74	36.145	ENSCSEG00000005479	rabl2	71	35.928
ENSCSEG00000019183	si:dkey-34d22.5	76	42.857	ENSCSEG00000016803	rab18b	84	42.857
ENSCSEG00000019183	si:dkey-34d22.5	79	42.286	ENSCSEG00000000205	RAB15	83	42.286
ENSCSEG00000019183	si:dkey-34d22.5	97	34.259	ENSCSEG00000007383	rab11a	95	34.259
ENSCSEG00000019183	si:dkey-34d22.5	81	38.919	ENSCSEG00000016284	rab33a	65	38.919
ENSCSEG00000019183	si:dkey-34d22.5	78	43.678	ENSCSEG00000020977	-	83	43.678
ENSCSEG00000019183	si:dkey-34d22.5	52	35.652	ENSCSEG00000015746	-	86	35.156
ENSCSEG00000019183	si:dkey-34d22.5	74	40.237	ENSCSEG00000010116	rab9a	77	40.237
ENSCSEG00000019183	si:dkey-34d22.5	73	41.718	ENSCSEG00000004941	rab41	75	41.718
ENSCSEG00000019183	si:dkey-34d22.5	68	39.869	ENSCSEG00000014479	-	63	39.869
ENSCSEG00000019183	si:dkey-34d22.5	77	36.842	ENSCSEG00000007239	-	77	36.842
ENSCSEG00000019183	si:dkey-34d22.5	75	37.349	ENSCSEG00000017024	rab5c	74	37.349
ENSCSEG00000019183	si:dkey-34d22.5	69	37.662	ENSCSEG00000010565	rab23	79	36.747
ENSCSEG00000019183	si:dkey-34d22.5	97	32.407	ENSCSEG00000012149	rab11bb	95	32.407
ENSCSEG00000019183	si:dkey-34d22.5	83	35.676	ENSCSEG00000007121	rab11ba	70	35.676
ENSCSEG00000019183	si:dkey-34d22.5	77	33.333	ENSCSEG00000011820	rras	86	33.333
ENSCSEG00000019183	si:dkey-34d22.5	75	36.145	ENSCSEG00000019797	rab22a	84	36.145
ENSCSEG00000019183	si:dkey-34d22.5	86	55.263	ENSCSEG00000019722	RAB39B	88	55.263
ENSCSEG00000019183	si:dkey-34d22.5	77	43.023	ENSCSEG00000013400	rab35b	98	39.269
ENSCSEG00000019183	si:dkey-34d22.5	77	32.571	ENSCSEG00000003581	rasd4	81	32.571
ENSCSEG00000019183	si:dkey-34d22.5	97	33.796	ENSCSEG00000017026	rab25a	96	33.796
ENSCSEG00000019183	si:dkey-34d22.5	85	40.741	ENSCSEG00000017211	rab2a	99	37.788
ENSCSEG00000019183	si:dkey-34d22.5	75	42.515	ENSCSEG00000011816	rab18a	80	42.515
ENSCSEG00000019183	si:dkey-34d22.5	57	34.328	ENSCSEG00000014982	rabl3	63	34.328
ENSCSEG00000019183	si:dkey-34d22.5	81	44.444	ENSCSEG00000014416	zgc:171927	82	44.444
ENSCSEG00000019183	si:dkey-34d22.5	75	43.976	ENSCSEG00000007292	rab30	80	43.976
ENSCSEG00000019183	si:dkey-34d22.5	97	33.796	ENSCSEG00000011996	rab11al	95	33.796
ENSCSEG00000019183	si:dkey-34d22.5	72	31.098	ENSCSEG00000014284	dnajc27	59	31.098
ENSCSEG00000019183	si:dkey-34d22.5	99	40.455	ENSCSEG00000016498	rab14	98	40.455
ENSCSEG00000019183	si:dkey-34d22.5	68	37.333	ENSCSEG00000020348	rab33ba	62	37.333
ENSCSEG00000019183	si:dkey-34d22.5	78	33.143	ENSCSEG00000018133	rab34b	69	33.143
ENSCSEG00000019183	si:dkey-34d22.5	80	36.702	ENSCSEG00000014467	rab9b	84	36.702
ENSCSEG00000019183	si:dkey-34d22.5	74	31.429	ENSCSEG00000000717	rasl11a	64	31.429
ENSCSEG00000019183	si:dkey-34d22.5	79	36.111	ENSCSEG00000005357	-	84	36.111
ENSCSEG00000019183	si:dkey-34d22.5	99	39.910	ENSCSEG00000010402	-	97	39.910
ENSCSEG00000019183	si:dkey-34d22.5	99	38.739	ENSCSEG00000018732	rab1ba	100	38.739
ENSCSEG00000019183	si:dkey-34d22.5	75	32.934	ENSCSEG00000003537	rhebl1	89	32.934
ENSCSEG00000019183	si:dkey-34d22.5	76	42.857	ENSCSEG00000003768	rab15	70	42.857
ENSCSEG00000019183	si:dkey-34d22.5	80	37.079	ENSCSEG00000011982	rab25b	93	35.023
ENSCSEG00000019183	si:dkey-34d22.5	77	42.690	ENSCSEG00000002358	rab13	84	42.690
ENSCSEG00000019183	si:dkey-34d22.5	75	39.881	ENSCSEG00000016933	rab12	67	39.881
ENSCSEG00000019183	si:dkey-34d22.5	77	42.373	ENSCSEG00000006243	zgc:101559	74	42.373
ENSCSEG00000019183	si:dkey-34d22.5	73	41.104	ENSCSEG00000003122	rab6ba	76	41.104
ENSCSEG00000019183	si:dkey-34d22.5	98	49.541	ENSCSEG00000017861	-	98	49.541
ENSCSEG00000019183	si:dkey-34d22.5	75	31.928	ENSCSEG00000009987	rras2	81	31.548
ENSCSEG00000019183	si:dkey-34d22.5	95	32.701	ENSCSEG00000012961	rab34a	79	32.701
ENSCSEG00000019183	si:dkey-34d22.5	71	32.484	ENSCSEG00000016611	rheb	83	32.484
ENSCSEG00000019183	si:dkey-34d22.5	81	40.556	ENSCSEG00000016556	rab6bb	82	40.556
ENSCSEG00000019183	si:dkey-34d22.5	98	55.963	ENSCSEG00000010582	rab42a	98	55.963

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000019183	si:dkey-34d22.5	100	75.225	ENSACIG00000016958	si:dkey-34d22.5	100	75.225	Amphilophus_citrinellus
ENSCSEG00000019183	si:dkey-34d22.5	100	79.730	ENSATEG00000010784	si:dkey-34d22.5	86	79.730	Anabas_testudineus
ENSCSEG00000019183	si:dkey-34d22.5	99	56.561	ENSCPBG00000011236	-	100	56.561	Chrysemys_picta_bellii
ENSCSEG00000019183	si:dkey-34d22.5	100	74.775	ENSCVAG00000017064	si:dkey-34d22.5	100	74.775	Cyprinodon_variegatus
ENSCSEG00000019183	si:dkey-34d22.5	83	48.370	ENSDARG00000100379	si:dkey-34d22.2	98	48.370	Danio_rerio
ENSCSEG00000019183	si:dkey-34d22.5	99	56.561	ENSFALG00000001373	-	99	56.561	Ficedula_albicollis
ENSCSEG00000019183	si:dkey-34d22.5	100	74.439	ENSFHEG00000012041	si:dkey-34d22.5	100	74.439	Fundulus_heteroclitus
ENSCSEG00000019183	si:dkey-34d22.5	87	61.658	ENSGALG00000000994	-	90	61.658	Gallus_gallus
ENSCSEG00000019183	si:dkey-34d22.5	100	73.874	ENSGAFG00000008183	si:dkey-34d22.5	100	73.874	Gambusia_affinis
ENSCSEG00000019183	si:dkey-34d22.5	94	55.769	ENSGAGG00000004918	-	100	55.769	Gopherus_agassizii
ENSCSEG00000019183	si:dkey-34d22.5	99	68.326	ENSHCOG00000015692	si:dkey-34d22.5	99	68.326	Hippocampus_comes
ENSCSEG00000019183	si:dkey-34d22.5	100	76.126	ENSKMAG00000012778	si:dkey-34d22.5	100	76.126	Kryptolebias_marmoratus
ENSCSEG00000019183	si:dkey-34d22.5	99	76.471	ENSLBEG00000002926	si:dkey-34d22.5	100	76.471	Labrus_bergylta
ENSCSEG00000019183	si:dkey-34d22.5	88	59.487	ENSLACG00000012674	si:dkey-34d22.5	92	59.487	Latimeria_chalumnae
ENSCSEG00000019183	si:dkey-34d22.5	98	64.977	ENSLOCG00000003467	si:dkey-34d22.5	98	64.977	Lepisosteus_oculatus
ENSCSEG00000019183	si:dkey-34d22.5	100	75.676	ENSMMOG00000006846	si:dkey-34d22.5	100	75.676	Mola_mola
ENSCSEG00000019183	si:dkey-34d22.5	100	75.225	ENSMALG00000013152	si:dkey-34d22.5	100	75.225	Monopterus_albus
ENSCSEG00000019183	si:dkey-34d22.5	99	80.090	ENSORLG00000014099	si:dkey-34d22.5	99	80.090	Oryzias_latipes
ENSCSEG00000019183	si:dkey-34d22.5	99	79.638	ENSORLG00020020277	si:dkey-34d22.5	99	79.638	Oryzias_latipes_hni
ENSCSEG00000019183	si:dkey-34d22.5	99	79.638	ENSORLG00015000142	si:dkey-34d22.5	99	79.638	Oryzias_latipes_hsok
ENSCSEG00000019183	si:dkey-34d22.5	91	82.587	ENSOMEG00000017958	si:dkey-34d22.5	99	80.090	Oryzias_melastigma
ENSCSEG00000019183	si:dkey-34d22.5	97	68.056	ENSPKIG00000021209	si:dkey-34d22.5	99	68.056	Paramormyrops_kingsleyae
ENSCSEG00000019183	si:dkey-34d22.5	87	60.825	ENSPSIG00000006606	-	95	60.825	Pelodiscus_sinensis
ENSCSEG00000019183	si:dkey-34d22.5	99	73.756	ENSPMGG00000001298	-	99	73.756	Periophthalmus_magnuspinnatus
ENSCSEG00000019183	si:dkey-34d22.5	93	56.398	ENSPCIG00000022399	-	91	56.398	Phascolarctos_cinereus
ENSCSEG00000019183	si:dkey-34d22.5	100	74.324	ENSPFOG00000014499	si:dkey-34d22.5	100	74.324	Poecilia_formosa
ENSCSEG00000019183	si:dkey-34d22.5	100	74.324	ENSPLAG00000007773	si:dkey-34d22.5	100	74.324	Poecilia_latipinna
ENSCSEG00000019183	si:dkey-34d22.5	100	74.324	ENSPMEG00000012932	si:dkey-34d22.5	100	74.324	Poecilia_mexicana
ENSCSEG00000019183	si:dkey-34d22.5	99	56.828	ENSSHAG00000008520	-	99	56.828	Sarcophilus_harrisii
ENSCSEG00000019183	si:dkey-34d22.5	99	63.927	ENSSFOG00015012088	rab42	97	63.927	Scleropages_formosus
ENSCSEG00000019183	si:dkey-34d22.5	100	79.279	ENSSLDG00000002646	si:dkey-34d22.5	100	79.279	Seriola_lalandi_dorsalis
ENSCSEG00000019183	si:dkey-34d22.5	99	79.638	ENSSPAG00000012955	si:dkey-34d22.5	99	79.638	Stegastes_partitus
ENSCSEG00000019183	si:dkey-34d22.5	86	50.526	ENSXETG00000020622	rab39a	91	50.526	Xenopus_tropicalis
ENSCSEG00000019183	si:dkey-34d22.5	100	72.973	ENSXCOG00000008410	si:dkey-34d22.5	100	72.973	Xiphophorus_couchianus
ENSCSEG00000019183	si:dkey-34d22.5	100	72.973	ENSXMAG00000029317	si:dkey-34d22.5	100	72.973	Xiphophorus_maculatus