EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000019226 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC103399007
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 6468 bases
Position: chrKI934437.1:21-6488
Accession: 103399007
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000029993	RVT_1	PF00078.27	9.7e-17	1	1
ENSCSEP00000029989	RVT_1	PF00078.27	1e-16	1	1
ENSCSEP00000029993	RNase_H	PF00075.24	1.5e-13	1	1
ENSCSEP00000029989	RNase_H	PF00075.24	1.6e-13	1	1
ENSCSEP00000029993	zf-CCHC	PF00098.23	1e-07	1	1
ENSCSEP00000029989	zf-CCHC	PF00098.23	1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000030396	-	5522	XM_008337758	ENSCSEP00000029993	1760 (aa)	-	-
ENSCSET00000030393	-	6396	-	ENSCSEP00000029989	1839 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000019226's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000019226's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000019226	-	51	35.370	ENSCSEG00000008943	-	87	34.829
ENSCSEG00000019226	-	59	33.824	ENSCSEG00000018136	-	85	33.364
ENSCSEG00000019226	-	59	33.824	ENSCSEG00000011566	-	85	33.364
ENSCSEG00000019226	-	59	33.824	ENSCSEG00000013867	-	85	33.364
ENSCSEG00000019226	-	59	33.824	ENSCSEG00000012922	-	85	33.364
ENSCSEG00000019226	-	59	33.824	ENSCSEG00000009059	-	85	33.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000019226	-	59	33.580	ENSACLG00000023027	-	86	33.579	Astatotilapia_calliptera
ENSCSEG00000019226	-	57	38.600	ENSACLG00000014318	-	75	38.600	Astatotilapia_calliptera
ENSCSEG00000019226	-	69	31.903	ENSACLG00000003782	-	90	32.009	Astatotilapia_calliptera
ENSCSEG00000019226	-	70	32.624	ENSACLG00000006254	-	88	32.624	Astatotilapia_calliptera
ENSCSEG00000019226	-	62	55.268	ENSAMXG00000040526	-	93	55.903	Astyanax_mexicanus
ENSCSEG00000019226	-	53	37.734	ENSAMXG00000033060	-	80	37.734	Astyanax_mexicanus
ENSCSEG00000019226	-	67	32.476	ENSAMXG00000033455	-	99	32.315	Astyanax_mexicanus
ENSCSEG00000019226	-	52	35.933	ENSBTAG00000052165	-	93	36.172	Bos_taurus
ENSCSEG00000019226	-	50	45.016	ENSCPBG00000009184	-	97	45.016	Chrysemys_picta_bellii
ENSCSEG00000019226	-	52	35.604	ENSECAG00000034459	-	86	35.604	Equus_caballus
ENSCSEG00000019226	-	51	34.183	ENSGALG00000053504	-	97	34.295	Gallus_gallus
ENSCSEG00000019226	-	50	35.141	ENSGALG00000050905	-	95	35.262	Gallus_gallus
ENSCSEG00000019226	-	72	39.111	ENSLBEG00000013565	-	94	39.337	Labrus_bergylta
ENSCSEG00000019226	-	69	32.430	ENSMAMG00000010978	-	98	32.430	Mastacembelus_armatus
ENSCSEG00000019226	-	51	42.353	ENSMODG00000029740	-	83	41.489	Monodelphis_domestica
ENSCSEG00000019226	-	51	42.995	ENSMODG00000027428	-	74	42.128	Monodelphis_domestica
ENSCSEG00000019226	-	53	42.371	ENSMODG00000029698	-	85	41.538	Monodelphis_domestica
ENSCSEG00000019226	-	51	42.995	ENSMODG00000027641	-	82	42.128	Monodelphis_domestica
ENSCSEG00000019226	-	51	42.781	ENSMODG00000028385	-	85	41.333	Monodelphis_domestica
ENSCSEG00000019226	-	55	40.000	ENSMODG00000027661	-	84	40.000	Monodelphis_domestica
ENSCSEG00000019226	-	51	42.888	ENSMODG00000028573	-	82	42.021	Monodelphis_domestica
ENSCSEG00000019226	-	51	42.888	ENSMODG00000029722	-	83	42.021	Monodelphis_domestica
ENSCSEG00000019226	-	66	31.934	ENSONIG00000021180	-	98	31.934	Oreochromis_niloticus
ENSCSEG00000019226	-	51	34.372	ENSORLG00020007796	-	60	34.372	Oryzias_latipes_hni
ENSCSEG00000019226	-	72	60.309	ENSOMEG00000021132	-	93	60.309	Oryzias_melastigma
ENSCSEG00000019226	-	53	36.550	ENSPSIG00000001866	-	83	36.552	Pelodiscus_sinensis
ENSCSEG00000019226	-	51	38.321	ENSSSCG00000034853	-	79	38.105	Sus_scrofa
ENSCSEG00000019226	-	69	34.518	ENSXMAG00000022532	-	88	34.518	Xiphophorus_maculatus