EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000019406 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 1682 bases
Position: chr3:12156453-12158134
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000030290	RRM_1	PF00076.22	8.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000030694	-	315	-	ENSCSEP00000030290	104 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000019406's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000019406's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000019406	-	63	36.765	ENSCSEG00000002271	srsf3b	50	37.313

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000019406	-	75	80.769	ENSG00000184672	RALYL	92	80.769	Homo_sapiens
ENSCSEG00000019406	-	75	89.744	ENSAPOG00000005050	RALYL	76	89.744	Acanthochromis_polyacanthus
ENSCSEG00000019406	-	72	77.333	ENSAPOG00000020641	-	88	77.333	Acanthochromis_polyacanthus
ENSCSEG00000019406	-	78	91.358	ENSACIG00000001335	-	74	87.500	Amphilophus_citrinellus
ENSCSEG00000019406	-	78	83.951	ENSAPEG00000021452	-	78	83.951	Amphiprion_percula
ENSCSEG00000019406	-	80	90.361	ENSAPEG00000010582	-	81	90.361	Amphiprion_percula
ENSCSEG00000019406	-	79	79.268	ENSCCAG00000025003	RALYL	80	79.268	Cebus_capucinus
ENSCSEG00000019406	-	77	88.750	ENSFHEG00000017466	-	56	88.750	Fundulus_heteroclitus
ENSCSEG00000019406	-	88	76.344	ENSFHEG00000000223	-	95	76.344	Fundulus_heteroclitus
ENSCSEG00000019406	-	75	84.615	ENSGAFG00000020052	-	76	84.615	Gambusia_affinis
ENSCSEG00000019406	-	75	91.026	ENSGAFG00000018541	RALYL	76	91.026	Gambusia_affinis
ENSCSEG00000019406	-	81	86.905	ENSHCOG00000012719	-	82	86.905	Hippocampus_comes
ENSCSEG00000019406	-	79	82.927	ENSHCOG00000002851	-	75	82.927	Hippocampus_comes
ENSCSEG00000019406	-	78	81.481	ENSLACG00000000135	-	91	81.481	Latimeria_chalumnae
ENSCSEG00000019406	-	75	78.205	ENSMMUG00000003920	-	80	78.205	Macaca_mulatta
ENSCSEG00000019406	-	84	85.057	ENSMAMG00000011137	RALYL	87	85.057	Mastacembelus_armatus
ENSCSEG00000019406	-	78	81.481	ENSMICG00000005558	RALYL	82	81.481	Microcebus_murinus
ENSCSEG00000019406	-	88	83.696	ENSMMOG00000004599	-	85	83.696	Mola_mola
ENSCSEG00000019406	-	86	71.579	ENSMODG00000029239	-	92	71.579	Monodelphis_domestica
ENSCSEG00000019406	-	75	79.487	ENSMUSG00000039717	Ralyl	92	79.487	Mus_musculus
ENSCSEG00000019406	-	77	81.250	ENSOANG00000030197	-	53	81.250	Ornithorhynchus_anatinus
ENSCSEG00000019406	-	75	87.179	ENSPKIG00000023807	RALYL	80	87.179	Paramormyrops_kingsleyae
ENSCSEG00000019406	-	87	70.833	ENSPCIG00000023938	-	83	70.833	Phascolarctos_cinereus
ENSCSEG00000019406	-	76	81.013	ENSRROG00000023925	RALYL	80	81.013	Rhinopithecus_roxellana
ENSCSEG00000019406	-	91	68.421	ENSSFOG00015012924	-	96	68.421	Scleropages_formosus
ENSCSEG00000019406	-	81	75.000	ENSSLDG00000008069	-	80	75.000	Seriola_lalandi_dorsalis
ENSCSEG00000019406	-	82	88.235	ENSSPAG00000014679	-	89	88.235	Stegastes_partitus
ENSCSEG00000019406	-	78	88.889	ENSTRUG00000021320	RALYL	88	88.889	Takifugu_rubripes
ENSCSEG00000019406	-	75	76.923	ENSTRUG00000002153	-	59	76.923	Takifugu_rubripes
ENSCSEG00000019406	-	83	73.256	ENSUAMG00000006020	-	90	73.256	Ursus_americanus
ENSCSEG00000019406	-	76	84.810	ENSXCOG00000016096	-	68	84.810	Xiphophorus_couchianus